Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30720
         (645 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    23   2.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   6.6  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    21   6.6  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   6.6  
AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    21   8.7  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   8.7  

>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +2

Query: 593 FPVTSAGMLWLICSSTV 643
           F V   G +WL+ SSTV
Sbjct: 489 FLVNDFGFIWLVLSSTV 505


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 12/37 (32%), Positives = 17/37 (45%)
 Frame = +2

Query: 455  PVIALCNTDSPLRFVDIASHATPSLPTLLV*CGGCWH 565
            P  A C+  S +  VDI + A P+  T  V     W+
Sbjct: 1323 PEKATCDGTSNVNVVDIVTTAKPAQSTTSVSTTTSWN 1359


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = -3

Query: 466 SNHRNVDI*SFSNGLMVLCRVQYNQETRFT 377
           S  RN++  SF   L++LC +       FT
Sbjct: 268 SKSRNIEGVSFGTNLVILCALWITTLLLFT 297


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -2

Query: 227 YDSTSSQNKFFPG 189
           +DS S QN  FPG
Sbjct: 740 FDSRSRQNSSFPG 752


>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -3

Query: 106 PRWVVAASILVTSSSLRASTSNPPDIV 26
           P+W  A   L  SSS + S    P IV
Sbjct: 79  PQWPFAWGSLXRSSSPQTSAPTGPPIV 105


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/21 (38%), Positives = 9/21 (42%)
 Frame = +2

Query: 71  CHQNACCNHPSWGRKC*LPDG 133
           CH N  C     G +C  P G
Sbjct: 269 CHNNGTCLDKVGGFECKCPPG 289


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,227
Number of Sequences: 336
Number of extensions: 4483
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16552695
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)