Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30720
         (645 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein p...    24   3.6  
CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative calcium/c...    24   4.7  
AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    23   8.3  
AY645022-1|AAT92558.1|  165|Anopheles gambiae hairy protein.           23   8.3  

>AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein
           protein.
          Length = 353

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
 Frame = +3

Query: 6   VVTQISATMSGGLDVLALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTH--VIN 179
           +VT+++  +  G+D+LA  +EDV + L        E       T +++RR DGT    + 
Sbjct: 202 IVTEMAEVLITGIDMLA-KKEDVERGL----QRALERTAVAATTSLWERR-DGTQRARVR 255

Query: 180 LRRTWEKLVLAARAVV 227
           L R    L+L  R VV
Sbjct: 256 LPRRDTDLLLDKRIVV 271


>CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative
           calcium/calmodulin-dependentprotein kinase, CAKI
           protein.
          Length = 872

 Score = 23.8 bits (49), Expect = 4.7
 Identities = 12/26 (46%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
 Frame = -1

Query: 315 APVCAANFSTA-R*PKGRDEMRTHQR 241
           APV    F +A + P GRD + TH R
Sbjct: 135 APVKLGGFGSAVQLPNGRDSVETHGR 160


>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = -3

Query: 643 HGRRTNQPQHPSAGHGEAHH 584
           HG  T+   H S G G  HH
Sbjct: 416 HGSPTHLHNHRSGGGGRHHH 435


>AY645022-1|AAT92558.1|  165|Anopheles gambiae hairy protein.
          Length = 165

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 9/34 (26%), Positives = 15/34 (44%)
 Frame = -3

Query: 631 TNQPQHPSAGHGEAHHEASTLHVPTTTTSNQ*SG 530
           T+ P H       +H+E    H    ++SN  +G
Sbjct: 68  TSSPYHAPPSPANSHYEPMECHSAVNSSSNSSTG 101


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 789,970
Number of Sequences: 2352
Number of extensions: 18831
Number of successful extensions: 30
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63559560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)