Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30714
         (687 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   1.3  
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          22   4.1  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           22   4.1  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    22   4.1  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    22   4.1  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    22   5.4  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    22   5.4  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -3

Query: 334  PPSVQSTLVAPPEGH 290
            PPSV S+ V PP  H
Sbjct: 1796 PPSVHSSTVVPPPQH 1810


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 10/26 (38%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
 Frame = -3

Query: 376 VGYPDTE-NCSQVLLPPSVQSTLVAP 302
           + YP ++ NC Q   PP + S L  P
Sbjct: 45  ITYPPSDWNCPQYNAPPYMSSVLQLP 70


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 10/26 (38%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
 Frame = -3

Query: 376 VGYPDTE-NCSQVLLPPSVQSTLVAP 302
           + YP ++ NC Q   PP + S L  P
Sbjct: 36  ITYPPSDWNCPQYNAPPYMSSVLQLP 61


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = -2

Query: 362 HRELFTSTLATFRTVYFSSATGGSS 288
           H++LF S        Y SS+  GSS
Sbjct: 20  HQQLFQSATTEAPAAYSSSSPSGSS 44


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = -2

Query: 362 HRELFTSTLATFRTVYFSSATGGSS 288
           H++LF S        Y SS+  GSS
Sbjct: 20  HQQLFQSATTEAPAAYSSSSPSGSS 44


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = -2

Query: 260 YSALVSYNDRTKAR 219
           Y+ LVS++DR K+R
Sbjct: 550 YTRLVSFSDRLKSR 563


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -2

Query: 149 HPPRPLYINKLCPIKEQTLV 90
           H  +P   + LC IKE+T++
Sbjct: 68  HRMKPALFSVLCEIKEKTVL 87


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,680
Number of Sequences: 336
Number of extensions: 3230
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)