BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdV30714 (687 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces po... 68 1e-12 SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces po... 45 1e-05 SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces ... 37 0.003 SPBC12D12.07c |trx2||mitochondrial thioredoxin Trx2|Schizosaccha... 33 0.029 SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyc... 33 0.051 SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces ... 31 0.12 SPCC553.04 |cyp9||WD repeat containing cyclophilin family peptid... 29 0.48 SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|c... 27 1.9 SPAC1142.08 |fhl1|SPAC8C9.01|fork head transcription factor Fhl1... 27 3.4 SPCC4B3.10c |ipk1||inositol 1,3,4,5,6-pentakisphosphate |Schizos... 27 3.4 SPAC6F6.11c |||pyridoxine-pyridoxal-pyridoxamine kinase |Schizos... 26 5.9 SPBC16H5.11c |skb1|rmt5|type II protein arginine N-methyltransfe... 25 7.8 SPAC4F8.13c |rng2||IQGAP|Schizosaccharomyces pombe|chr 1|||Manual 25 7.8 >SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces pombe|chr 1|||Manual Length = 492 Score = 68.1 bits (159), Expect = 1e-12 Identities = 28/59 (47%), Positives = 43/59 (72%) Frame = +3 Query: 312 KVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSSEYNGPRESNGIVKYMRAQVGPSSKEL 488 +VDCTE G C ++S+ GYPTL +F+ G+ S+Y+GPR+ + +VKYMR Q+ P+ K + Sbjct: 77 EVDCTEEG-DLCSEYSIRGYPTLNVFKNGKQISQYSGPRKHDALVKYMRKQLLPTVKPI 134 Score = 42.7 bits (96), Expect = 5e-05 Identities = 18/39 (46%), Positives = 25/39 (64%), Gaps = 1/39 (2%) Frame = +2 Query: 137 AEEDVLDLTDSDFS-AVLSQHDTALVMFYAPWCGHCKRL 250 ++ED++ L +F V+ + LV FYAPWCGHCK L Sbjct: 353 SQEDLVVLVADNFDDIVMDETKDVLVEFYAPWCGHCKNL 391 Score = 39.1 bits (87), Expect = 6e-04 Identities = 16/43 (37%), Positives = 24/43 (55%) Frame = +2 Query: 122 YLCKAAEEDVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRL 250 + C +AE V + + +++ +V FYAPWCGHCK L Sbjct: 17 FFCASAE--VPKVNKEGLNELITADKVLMVKFYAPWCGHCKAL 57 >SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces pombe|chr 1|||Manual Length = 363 Score = 44.8 bits (101), Expect = 1e-05 Identities = 20/64 (31%), Positives = 34/64 (53%) Frame = +2 Query: 59 KAPAKFEMFGSLKFVLLLGIIYLCKAAEEDVLDLTDSDFSAVLSQHDTALVMFYAPWCGH 238 + P F +F + F L+ G+ + ++L +F + +LV+FYAPWCG+ Sbjct: 4 RIPTLFTLFLAC-FSLVSGVFGYSPMFGSNTIELNSKNFRKFVKAKGPSLVVFYAPWCGY 62 Query: 239 CKRL 250 CK+L Sbjct: 63 CKKL 66 Score = 41.1 bits (92), Expect = 1e-04 Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 6/68 (8%) Frame = +3 Query: 309 TKVDC-TEGGKSTCEQFSVSGYPTLKIF---RKGE--LSSEYNGPRESNGIVKYMRAQVG 470 T VDC + ++ C Q+ V G+PT+K+ KG S++YNG R + K++ + Sbjct: 84 TAVDCDADQNRAVCSQYQVQGFPTIKLVYPSSKGSSLSSTDYNGDRSYKSLQKFVSDSI- 142 Query: 471 PSSKELLT 494 PS ++LT Sbjct: 143 PSKVKILT 150 >SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces pombe|chr 1|||Manual Length = 359 Score = 36.7 bits (81), Expect = 0.003 Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 1/36 (2%) Frame = +2 Query: 146 DVLDLTDSDFS-AVLSQHDTALVMFYAPWCGHCKRL 250 +V++L +F V+ LV FYA WCG+CKRL Sbjct: 141 NVVELDSLNFDKVVMDDKKDVLVEFYADWCGYCKRL 176 Score = 34.7 bits (76), Expect = 0.013 Identities = 12/16 (75%), Positives = 13/16 (81%) Frame = +2 Query: 203 ALVMFYAPWCGHCKRL 250 AL+ FYA WCGHCK L Sbjct: 42 ALIEFYATWCGHCKSL 57 >SPBC12D12.07c |trx2||mitochondrial thioredoxin Trx2|Schizosaccharomyces pombe|chr 2|||Manual Length = 121 Score = 33.5 bits (73), Expect = 0.029 Identities = 13/28 (46%), Positives = 17/28 (60%) Frame = +2 Query: 170 DFSAVLSQHDTALVMFYAPWCGHCKRLK 253 D++ +S +V FYA WCG CK LK Sbjct: 27 DYNTRISADKVTVVDFYADWCGPCKYLK 54 >SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyces pombe|chr 1|||Manual Length = 103 Score = 32.7 bits (71), Expect = 0.051 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = +2 Query: 167 SDFSAVLSQHDTALVMFYAPWCGHCKRL 250 S+F +++ Q +V F+A WCG CK + Sbjct: 9 SEFKSIVCQDKLVVVDFFATWCGPCKAI 36 >SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces pombe|chr 2|||Manual Length = 726 Score = 31.5 bits (68), Expect = 0.12 Identities = 14/31 (45%), Positives = 20/31 (64%) Frame = +2 Query: 158 LTDSDFSAVLSQHDTALVMFYAPWCGHCKRL 250 LTD+D + +S+ T + +Y P CG CKRL Sbjct: 31 LTDNDLESEVSK-GTWFIKYYLPSCGACKRL 60 Score = 26.6 bits (56), Expect = 3.4 Identities = 13/39 (33%), Positives = 20/39 (51%) Frame = +3 Query: 336 KSTCEQFSVSGYPTLKIFRKGELSSEYNGPRESNGIVKY 452 K C+Q+S+ +PT +F K E EY G +V + Sbjct: 342 KRACKQYSIQYFPTF-LFFKEEAFVEYVGLPNEGDLVSF 379 >SPCC553.04 |cyp9||WD repeat containing cyclophilin family peptidyl-prolyl cis-trans isomerase Cyp9|Schizosaccharomyces pombe|chr 3|||Manual Length = 610 Score = 29.5 bits (63), Expect = 0.48 Identities = 13/38 (34%), Positives = 23/38 (60%) Frame = -1 Query: 651 FSRTSLAEE*AKVTSSLNLSAVLRNSPFRSDSFSKNPT 538 F+R SL ++ K ++ +L + N+P +SF K+PT Sbjct: 366 FTRLSLYQQAPKKSNLPSLDVIASNNPLVEESFQKDPT 403 >SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|chr 2|||Manual Length = 244 Score = 27.5 bits (58), Expect = 1.9 Identities = 9/17 (52%), Positives = 12/17 (70%) Frame = +2 Query: 206 LVMFYAPWCGHCKRLKQ 256 L+ FYAPW CK++ Q Sbjct: 24 LLNFYAPWAAPCKQMNQ 40 >SPAC1142.08 |fhl1|SPAC8C9.01|fork head transcription factor Fhl1 |Schizosaccharomyces pombe|chr 1|||Manual Length = 743 Score = 26.6 bits (56), Expect = 3.4 Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 1/49 (2%) Frame = -1 Query: 642 TSLAEE*AKVTSSLNLSAVLRNSPFRSD-SFSKNPTTTTSSLEVKAQNQ 499 ++ +E +++TS NL + N PF SD +P T +E Q Q Sbjct: 627 STASESKSEITSHQNLHTIPINKPFTSDRPLYSSPNDTLERVETGNQGQ 675 >SPCC4B3.10c |ipk1||inositol 1,3,4,5,6-pentakisphosphate |Schizosaccharomyces pombe|chr 3|||Manual Length = 640 Score = 26.6 bits (56), Expect = 3.4 Identities = 10/23 (43%), Positives = 15/23 (65%) Frame = +3 Query: 150 FSILQIPTFRLFYLNMIQPWSCF 218 F LQ+ FR + N+++PW CF Sbjct: 208 FYCLQLQMFRKMH-NIVRPWDCF 229 >SPAC6F6.11c |||pyridoxine-pyridoxal-pyridoxamine kinase |Schizosaccharomyces pombe|chr 1|||Manual Length = 309 Score = 25.8 bits (54), Expect = 5.9 Identities = 11/21 (52%), Positives = 16/21 (76%) Frame = +2 Query: 593 DKLREEVTFAHSSANEVLEKT 655 DKL++ V A SS +EV++KT Sbjct: 248 DKLKKSVEMALSSVHEVIQKT 268 >SPBC16H5.11c |skb1|rmt5|type II protein arginine N-methyltransferase Skb1|Schizosaccharomyces pombe|chr 2|||Manual Length = 645 Score = 25.4 bits (53), Expect = 7.8 Identities = 13/27 (48%), Positives = 16/27 (59%), Gaps = 2/27 (7%) Frame = +2 Query: 230 CGHCKRLKQSTL*PPAC*RPMTL--RW 304 CG+ RLK + PPAC P+ L RW Sbjct: 186 CGYHPRLKVALELPPACSPPIELVNRW 212 >SPAC4F8.13c |rng2||IQGAP|Schizosaccharomyces pombe|chr 1|||Manual Length = 1489 Score = 25.4 bits (53), Expect = 7.8 Identities = 10/31 (32%), Positives = 18/31 (58%) Frame = -3 Query: 469 PTWARMYLTMPLDSLGPLYSEESSPFLKIFS 377 P ++Y+T+ D +G E +SP +K+ S Sbjct: 1414 PQKEKLYITISADEVGKFILEATSPTVKVSS 1444 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,771,807 Number of Sequences: 5004 Number of extensions: 54801 Number of successful extensions: 156 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 143 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 156 length of database: 2,362,478 effective HSP length: 70 effective length of database: 2,012,198 effective search space used: 317927284 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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