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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30714
         (687 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces po...    68   1e-12
SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces po...    45   1e-05
SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces ...    37   0.003
SPBC12D12.07c |trx2||mitochondrial thioredoxin Trx2|Schizosaccha...    33   0.029
SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyc...    33   0.051
SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces ...    31   0.12 
SPCC553.04 |cyp9||WD repeat containing cyclophilin family peptid...    29   0.48 
SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|c...    27   1.9  
SPAC1142.08 |fhl1|SPAC8C9.01|fork head transcription factor Fhl1...    27   3.4  
SPCC4B3.10c |ipk1||inositol 1,3,4,5,6-pentakisphosphate |Schizos...    27   3.4  
SPAC6F6.11c |||pyridoxine-pyridoxal-pyridoxamine kinase |Schizos...    26   5.9  
SPBC16H5.11c |skb1|rmt5|type II protein arginine N-methyltransfe...    25   7.8  
SPAC4F8.13c |rng2||IQGAP|Schizosaccharomyces pombe|chr 1|||Manual      25   7.8  

>SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 492

 Score = 68.1 bits (159), Expect = 1e-12
 Identities = 28/59 (47%), Positives = 43/59 (72%)
 Frame = +3

Query: 312 KVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSSEYNGPRESNGIVKYMRAQVGPSSKEL 488
           +VDCTE G   C ++S+ GYPTL +F+ G+  S+Y+GPR+ + +VKYMR Q+ P+ K +
Sbjct: 77  EVDCTEEG-DLCSEYSIRGYPTLNVFKNGKQISQYSGPRKHDALVKYMRKQLLPTVKPI 134



 Score = 42.7 bits (96), Expect = 5e-05
 Identities = 18/39 (46%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
 Frame = +2

Query: 137 AEEDVLDLTDSDFS-AVLSQHDTALVMFYAPWCGHCKRL 250
           ++ED++ L   +F   V+ +    LV FYAPWCGHCK L
Sbjct: 353 SQEDLVVLVADNFDDIVMDETKDVLVEFYAPWCGHCKNL 391



 Score = 39.1 bits (87), Expect = 6e-04
 Identities = 16/43 (37%), Positives = 24/43 (55%)
 Frame = +2

Query: 122 YLCKAAEEDVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRL 250
           + C +AE  V  +     + +++     +V FYAPWCGHCK L
Sbjct: 17  FFCASAE--VPKVNKEGLNELITADKVLMVKFYAPWCGHCKAL 57


>SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 363

 Score = 44.8 bits (101), Expect = 1e-05
 Identities = 20/64 (31%), Positives = 34/64 (53%)
 Frame = +2

Query: 59  KAPAKFEMFGSLKFVLLLGIIYLCKAAEEDVLDLTDSDFSAVLSQHDTALVMFYAPWCGH 238
           + P  F +F +  F L+ G+         + ++L   +F   +     +LV+FYAPWCG+
Sbjct: 4   RIPTLFTLFLAC-FSLVSGVFGYSPMFGSNTIELNSKNFRKFVKAKGPSLVVFYAPWCGY 62

Query: 239 CKRL 250
           CK+L
Sbjct: 63  CKKL 66



 Score = 41.1 bits (92), Expect = 1e-04
 Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 6/68 (8%)
 Frame = +3

Query: 309 TKVDC-TEGGKSTCEQFSVSGYPTLKIF---RKGE--LSSEYNGPRESNGIVKYMRAQVG 470
           T VDC  +  ++ C Q+ V G+PT+K+     KG    S++YNG R    + K++   + 
Sbjct: 84  TAVDCDADQNRAVCSQYQVQGFPTIKLVYPSSKGSSLSSTDYNGDRSYKSLQKFVSDSI- 142

Query: 471 PSSKELLT 494
           PS  ++LT
Sbjct: 143 PSKVKILT 150


>SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 359

 Score = 36.7 bits (81), Expect = 0.003
 Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
 Frame = +2

Query: 146 DVLDLTDSDFS-AVLSQHDTALVMFYAPWCGHCKRL 250
           +V++L   +F   V+      LV FYA WCG+CKRL
Sbjct: 141 NVVELDSLNFDKVVMDDKKDVLVEFYADWCGYCKRL 176



 Score = 34.7 bits (76), Expect = 0.013
 Identities = 12/16 (75%), Positives = 13/16 (81%)
 Frame = +2

Query: 203 ALVMFYAPWCGHCKRL 250
           AL+ FYA WCGHCK L
Sbjct: 42  ALIEFYATWCGHCKSL 57


>SPBC12D12.07c |trx2||mitochondrial thioredoxin
           Trx2|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 121

 Score = 33.5 bits (73), Expect = 0.029
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +2

Query: 170 DFSAVLSQHDTALVMFYAPWCGHCKRLK 253
           D++  +S     +V FYA WCG CK LK
Sbjct: 27  DYNTRISADKVTVVDFYADWCGPCKYLK 54


>SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 103

 Score = 32.7 bits (71), Expect = 0.051
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = +2

Query: 167 SDFSAVLSQHDTALVMFYAPWCGHCKRL 250
           S+F +++ Q    +V F+A WCG CK +
Sbjct: 9   SEFKSIVCQDKLVVVDFFATWCGPCKAI 36


>SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 726

 Score = 31.5 bits (68), Expect = 0.12
 Identities = 14/31 (45%), Positives = 20/31 (64%)
 Frame = +2

Query: 158 LTDSDFSAVLSQHDTALVMFYAPWCGHCKRL 250
           LTD+D  + +S+  T  + +Y P CG CKRL
Sbjct: 31  LTDNDLESEVSK-GTWFIKYYLPSCGACKRL 60



 Score = 26.6 bits (56), Expect = 3.4
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = +3

Query: 336 KSTCEQFSVSGYPTLKIFRKGELSSEYNGPRESNGIVKY 452
           K  C+Q+S+  +PT  +F K E   EY G      +V +
Sbjct: 342 KRACKQYSIQYFPTF-LFFKEEAFVEYVGLPNEGDLVSF 379


>SPCC553.04 |cyp9||WD repeat containing cyclophilin family
           peptidyl-prolyl cis-trans isomerase
           Cyp9|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 610

 Score = 29.5 bits (63), Expect = 0.48
 Identities = 13/38 (34%), Positives = 23/38 (60%)
 Frame = -1

Query: 651 FSRTSLAEE*AKVTSSLNLSAVLRNSPFRSDSFSKNPT 538
           F+R SL ++  K ++  +L  +  N+P   +SF K+PT
Sbjct: 366 FTRLSLYQQAPKKSNLPSLDVIASNNPLVEESFQKDPT 403


>SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 244

 Score = 27.5 bits (58), Expect = 1.9
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +2

Query: 206 LVMFYAPWCGHCKRLKQ 256
           L+ FYAPW   CK++ Q
Sbjct: 24  LLNFYAPWAAPCKQMNQ 40


>SPAC1142.08 |fhl1|SPAC8C9.01|fork head transcription factor Fhl1
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 743

 Score = 26.6 bits (56), Expect = 3.4
 Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
 Frame = -1

Query: 642 TSLAEE*AKVTSSLNLSAVLRNSPFRSD-SFSKNPTTTTSSLEVKAQNQ 499
           ++ +E  +++TS  NL  +  N PF SD     +P  T   +E   Q Q
Sbjct: 627 STASESKSEITSHQNLHTIPINKPFTSDRPLYSSPNDTLERVETGNQGQ 675


>SPCC4B3.10c |ipk1||inositol 1,3,4,5,6-pentakisphosphate
           |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 640

 Score = 26.6 bits (56), Expect = 3.4
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +3

Query: 150 FSILQIPTFRLFYLNMIQPWSCF 218
           F  LQ+  FR  + N+++PW CF
Sbjct: 208 FYCLQLQMFRKMH-NIVRPWDCF 229


>SPAC6F6.11c |||pyridoxine-pyridoxal-pyridoxamine kinase
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 309

 Score = 25.8 bits (54), Expect = 5.9
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = +2

Query: 593 DKLREEVTFAHSSANEVLEKT 655
           DKL++ V  A SS +EV++KT
Sbjct: 248 DKLKKSVEMALSSVHEVIQKT 268


>SPBC16H5.11c |skb1|rmt5|type II protein arginine
           N-methyltransferase Skb1|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 645

 Score = 25.4 bits (53), Expect = 7.8
 Identities = 13/27 (48%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
 Frame = +2

Query: 230 CGHCKRLKQSTL*PPAC*RPMTL--RW 304
           CG+  RLK +   PPAC  P+ L  RW
Sbjct: 186 CGYHPRLKVALELPPACSPPIELVNRW 212


>SPAC4F8.13c |rng2||IQGAP|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1489

 Score = 25.4 bits (53), Expect = 7.8
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = -3

Query: 469  PTWARMYLTMPLDSLGPLYSEESSPFLKIFS 377
            P   ++Y+T+  D +G    E +SP +K+ S
Sbjct: 1414 PQKEKLYITISADEVGKFILEATSPTVKVSS 1444


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,771,807
Number of Sequences: 5004
Number of extensions: 54801
Number of successful extensions: 156
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 143
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 156
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 317927284
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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