BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdV30714 (687 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 11_01_0618 - 4941906-4942118,4942231-4942343,4942534-4942651,494... 66 2e-11 05_01_0410 - 3234455-3234466,3234851-3234950,3235037-3235161,323... 55 6e-08 04_03_1011 - 21708503-21708544,21708689-21708898,21709000-217091... 54 1e-07 02_04_0214 - 20976977-20977171,20977499-20977611,20978041-209781... 52 6e-07 01_03_0161 + 13337265-13337297,13337880-13338017,13338211-133383... 50 2e-06 04_03_0988 - 21469811-21469831,21470823-21471047,21471327-214716... 49 3e-06 02_04_0182 + 20719782-20720033,20720502-20720605,20720693-207210... 47 2e-05 09_04_0345 + 16876489-16876614,16876718-16876876,16877989-168781... 42 6e-04 02_01_0001 - 3864-4049,4861-4917,5514-5648,5710-5808,5884-5952,6... 42 6e-04 03_02_0621 - 9923163-9923245,9924163-9924338,9924437-9924495,992... 39 0.003 07_03_0651 + 20287661-20287701,20288034-20288124,20288737-202888... 38 0.007 01_06_1771 + 39787895-39788223,39788419-39788518,39788640-39788774 33 0.28 07_03_0550 - 19356710-19357763,19358941-19359256,19359552-19359609 31 1.1 02_05_0085 - 25697860-25698142,25698631-25698946,25700481-257005... 30 2.0 04_04_1575 + 34548774-34549109,34549979-34550185 28 8.0 >11_01_0618 - 4941906-4942118,4942231-4942343,4942534-4942651, 4942762-4942881,4942964-4943101,4943392-4943517, 4943659-4943847,4943951-4944238,4944344-4944374, 4945014-4945216 Length = 512 Score = 66.5 bits (155), Expect = 2e-11 Identities = 32/66 (48%), Positives = 45/66 (68%), Gaps = 2/66 (3%) Frame = +3 Query: 312 KVDCT-EGGKSTCEQFSVSGYPTLKIFR-KGELSSEYNGPRESNGIVKYMRAQVGPSSKE 485 KVD E K ++ + G+PTLKIFR +G+ EY GPRE+ GIV+Y++ QVGP+SKE Sbjct: 97 KVDANDEKNKPLATKYEIQGFPTLKIFRNQGKNIQEYKGPREAEGIVEYLKKQVGPASKE 156 Query: 486 LLTVAD 503 + + D Sbjct: 157 IKSPED 162 Score = 48.4 bits (110), Expect = 5e-06 Identities = 20/39 (51%), Positives = 25/39 (64%) Frame = +2 Query: 134 AAEEDVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRL 250 AA E VL L F +++H +V FYAPWCGHCK+L Sbjct: 37 AAAEAVLTLDADGFDEAVAKHPFMVVEFYAPWCGHCKKL 75 Score = 39.1 bits (87), Expect = 0.003 Identities = 15/31 (48%), Positives = 18/31 (58%) Frame = +2 Query: 158 LTDSDFSAVLSQHDTALVMFYAPWCGHCKRL 250 + D+ V LV FYAPWCGHCK+L Sbjct: 390 VADNVHDFVFKSGKNVLVEFYAPWCGHCKKL 420 >05_01_0410 - 3234455-3234466,3234851-3234950,3235037-3235161, 3235244-3235400,3235644-3235735,3235828-3235855, 3235949-3236066,3236411-3236466,3236556-3236653, 3236864-3236948,3237428-3237600 Length = 347 Score = 54.8 bits (126), Expect = 6e-08 Identities = 23/39 (58%), Positives = 28/39 (71%) Frame = +2 Query: 134 AAEEDVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRL 250 A+ +DVL LT+S F + Q ALV FYAPWCGHCK+L Sbjct: 27 ASADDVLALTESTFEKEVGQDRAALVEFYAPWCGHCKKL 65 Score = 50.0 bits (114), Expect = 2e-06 Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 9/79 (11%) Frame = +3 Query: 312 KVDCTEGGKSTCEQFSVSGYPTLKIFRKGELS-SEYNGPRESNGIVKYMRAQVG------ 470 KVDC E KS C ++ VSGYPT++ F KG L +Y G R + + +Y+ ++ Sbjct: 86 KVDCDEH-KSVCSKYGVSGYPTIQWFPKGSLEPKKYEGQRTAEALAEYVNSEAATNVKIA 144 Query: 471 --PSSKELLTVADFELLLL 521 PSS +LT F+ ++L Sbjct: 145 AVPSSVVVLTPETFDSVVL 163 Score = 44.0 bits (99), Expect = 1e-04 Identities = 21/40 (52%), Positives = 23/40 (57%), Gaps = 1/40 (2%) Frame = +2 Query: 134 AAEEDVLDLTDSDF-SAVLSQHDTALVMFYAPWCGHCKRL 250 A V+ LT F S VL + LV FYAPWCGHCK L Sbjct: 145 AVPSSVVVLTPETFDSVVLDETKDVLVEFYAPWCGHCKHL 184 Score = 43.2 bits (97), Expect = 2e-04 Identities = 24/52 (46%), Positives = 33/52 (63%), Gaps = 3/52 (5%) Frame = +3 Query: 348 EQFSVSGYPTLKIFRKGELSSE-YNGPRESNGIVKYMRAQVGPS--SKELLT 494 E++ VSG+PTLK F KG + E Y+G RE + VK++ + G S SK LT Sbjct: 216 EKYGVSGFPTLKFFPKGNKAGEDYDGGRELDDFVKFINEKCGTSRDSKGQLT 267 >04_03_1011 - 21708503-21708544,21708689-21708898,21709000-21709112, 21709232-21709349,21709386-21709412,21709671-21709808, 21710069-21710194,21710279-21710467,21710598-21710885, 21710937-21711024,21711120-21711298 Length = 505 Score = 54.0 bits (124), Expect = 1e-07 Identities = 27/61 (44%), Positives = 39/61 (63%), Gaps = 2/61 (3%) Frame = +3 Query: 312 KVDC-TEGGKSTCEQFSVSGYPTLKIFRKGELSSE-YNGPRESNGIVKYMRAQVGPSSKE 485 KVD E K +++ V YPT+KI + G Y GPRE++GIV+Y++ QVGP+S + Sbjct: 108 KVDAYNERNKELKDKYGVYSYPTIKIMKNGGSDVRGYGGPREADGIVEYLKRQVGPASLK 167 Query: 486 L 488 L Sbjct: 168 L 168 Score = 50.0 bits (114), Expect = 2e-06 Identities = 20/37 (54%), Positives = 27/37 (72%) Frame = +2 Query: 140 EEDVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRL 250 +E VL L +FS V+++H +V FYAPWCGHCK+L Sbjct: 31 KEAVLTLDAGNFSEVVAKHPFIVVKFYAPWCGHCKQL 67 Score = 35.1 bits (77), Expect = 0.053 Identities = 12/30 (40%), Positives = 18/30 (60%) Frame = +2 Query: 158 LTDSDFSAVLSQHDTALVMFYAPWCGHCKR 247 + D+ V + L+ FYAPWCGHC++ Sbjct: 370 VADNIDDIVFNSGKNVLLEFYAPWCGHCRK 399 Score = 30.7 bits (66), Expect = 1.1 Identities = 12/42 (28%), Positives = 21/42 (50%) Frame = +3 Query: 354 FSVSGYPTLKIFRKGELSSEYNGPRESNGIVKYMRAQVGPSS 479 F+V GYPT+ + Y+G R + I+ ++ GP + Sbjct: 433 FTVEGYPTIYFYSSSGNLLSYDGARTAEEIISFINENRGPKA 474 >02_04_0214 - 20976977-20977171,20977499-20977611,20978041-20978158, 20978585-20978701,20978836-20978973,20979193-20979318, 20979827-20980015,20980539-20980863,20980977-20981134 Length = 492 Score = 51.6 bits (118), Expect = 6e-07 Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 2/65 (3%) Frame = +3 Query: 312 KVDCTEG-GKSTCEQFSVSGYPTLKIFR-KGELSSEYNGPRESNGIVKYMRAQVGPSSKE 485 KVD + + + V GYPT++I R +G S Y GPR++ GIV Y++ Q GP+S E Sbjct: 82 KVDASADLNRGLAGEHGVQGYPTIRILRDRGARSHNYAGPRDAAGIVAYLKRQAGPASVE 141 Query: 486 LLTVA 500 + A Sbjct: 142 IAASA 146 Score = 49.6 bits (113), Expect = 2e-06 Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 3/60 (5%) Frame = +2 Query: 80 MFGSLKFVLLLGIIYLCKAAE---EDVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRL 250 M S F ++ L +A E VL L +F+ V+ HD +V FYAPWCGHC +L Sbjct: 1 MASSTAFAAAFALLLLASSAAAEGEAVLTLDAGNFTEVVGAHDFIVVEFYAPWCGHCNQL 60 Score = 36.3 bits (80), Expect = 0.023 Identities = 13/31 (41%), Positives = 19/31 (61%) Frame = +2 Query: 158 LTDSDFSAVLSQHDTALVMFYAPWCGHCKRL 250 + D+ V + L+ FYAPWCGHC++L Sbjct: 376 VADNLREVVFNSGKNVLLEFYAPWCGHCQKL 406 Score = 29.9 bits (64), Expect = 2.0 Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 1/46 (2%) Frame = +2 Query: 518 SKDEVVVVGFFEKESDLKGE-FLKTADKLREEVTFAHSSANEVLEK 652 + D VVVVG F + S + E F+ A+K+R + F H++ VL + Sbjct: 155 ANDGVVVVGVFPELSGSEFESFMAVAEKMRADYDFRHTTDAGVLPR 200 >01_03_0161 + 13337265-13337297,13337880-13338017,13338211-13338308, 13338395-13338450,13338664-13338781,13338889-13338916, 13339021-13339112,13339321-13339477,13339569-13339693, 13339785-13339884,13339991-13340059 Length = 337 Score = 49.6 bits (113), Expect = 2e-06 Identities = 26/70 (37%), Positives = 41/70 (58%), Gaps = 1/70 (1%) Frame = +3 Query: 312 KVDCTEGGKSTCEQFSVSGYPTLKIFRKGELS-SEYNGPRESNGIVKYMRAQVGPSSKEL 488 KVDC E KS C ++ VSGYPT++ F KG L +Y G R + + +++ + G + K L Sbjct: 57 KVDCDEH-KSVCSKYGVSGYPTIQWFPKGSLEPKKYEGQRSAEALAEFVNTEGGTNVK-L 114 Query: 489 LTVADFELLL 518 T+ ++L Sbjct: 115 ATIPSSVVVL 124 Score = 46.0 bits (104), Expect = 3e-05 Identities = 22/48 (45%), Positives = 30/48 (62%), Gaps = 1/48 (2%) Frame = +3 Query: 336 KSTCEQFSVSGYPTLKIFRKGELSSE-YNGPRESNGIVKYMRAQVGPS 476 K E++ VSGYPTLK F KG + E Y+G RE + VK++ + G S Sbjct: 183 KDLAEKYGVSGYPTLKFFPKGNKAGEDYDGGRELDDFVKFINEKCGTS 230 Score = 41.9 bits (94), Expect = 5e-04 Identities = 17/29 (58%), Positives = 20/29 (68%) Frame = +2 Query: 164 DSDFSAVLSQHDTALVMFYAPWCGHCKRL 250 D+ S VL ++ LV FYAPWCGHCK L Sbjct: 127 DNFDSIVLDENKDILVEFYAPWCGHCKHL 155 >04_03_0988 - 21469811-21469831,21470823-21471047,21471327-21471634, 21471864-21472234,21472327-21472430,21473086-21473325 Length = 422 Score = 49.2 bits (112), Expect = 3e-06 Identities = 20/34 (58%), Positives = 23/34 (67%) Frame = +2 Query: 149 VLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRL 250 V++L +S F A L D V FYAPWCGHCKRL Sbjct: 44 VIELDESSFEAALGAIDYLFVDFYAPWCGHCKRL 77 >02_04_0182 + 20719782-20720033,20720502-20720605,20720693-20721066, 20721302-20721609,20721853-20722092 Length = 425 Score = 46.8 bits (106), Expect = 2e-05 Identities = 19/34 (55%), Positives = 22/34 (64%) Frame = +2 Query: 149 VLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRL 250 VL+L D +F A + V FYAPWCGHCKRL Sbjct: 48 VLELDDGNFDAAVRAAGLLFVDFYAPWCGHCKRL 81 >09_04_0345 + 16876489-16876614,16876718-16876876,16877989-16878102, 16878701-16878882,16879142-16879241,16879597-16879638, 16879818-16879994,16880084-16880175,16880633-16880779, 16880832-16881036 Length = 447 Score = 41.5 bits (93), Expect = 6e-04 Identities = 18/40 (45%), Positives = 26/40 (65%), Gaps = 1/40 (2%) Frame = +2 Query: 134 AAEEDVLDLTDSDF-SAVLSQHDTALVMFYAPWCGHCKRL 250 +A VL ++F S VL+ + LV F+APWCGHC++L Sbjct: 26 SAGSPVLQFNPNNFKSKVLNSNGVVLVEFFAPWCGHCQQL 65 Score = 38.7 bits (86), Expect = 0.004 Identities = 14/34 (41%), Positives = 24/34 (70%), Gaps = 1/34 (2%) Frame = +2 Query: 152 LDLTDSDFSAVLSQH-DTALVMFYAPWCGHCKRL 250 ++L +F ++++ D +V F+APWCGHCK+L Sbjct: 168 IELNSQNFDKLVTKSKDLWIVEFFAPWCGHCKKL 201 Score = 37.5 bits (83), Expect = 0.010 Identities = 14/44 (31%), Positives = 27/44 (61%) Frame = +3 Query: 336 KSTCEQFSVSGYPTLKIFRKGELSSEYNGPRESNGIVKYMRAQV 467 K +++ + G+PT+K+F G+ +Y G R+ IV++ +QV Sbjct: 91 KELAQEYGIRGFPTIKVFVPGKPPVDYQGARDVKPIVEFALSQV 134 >02_01_0001 - 3864-4049,4861-4917,5514-5648,5710-5808,5884-5952, 6419-6493,6619-6705,6873-6953,7021-7163,7262-7430, 7538-7667,7753-8255 Length = 577 Score = 41.5 bits (93), Expect = 6e-04 Identities = 17/37 (45%), Positives = 23/37 (62%) Frame = +2 Query: 140 EEDVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRL 250 E V L+ ++FS L+ H +V FYAPWC HC+ L Sbjct: 72 ETHVFLLSAANFSDFLASHRHVMVEFYAPWCAHCQAL 108 Score = 31.1 bits (67), Expect = 0.86 Identities = 9/12 (75%), Positives = 11/12 (91%) Frame = +2 Query: 218 YAPWCGHCKRLK 253 YAPWCGHC+ L+ Sbjct: 454 YAPWCGHCQELE 465 >03_02_0621 - 9923163-9923245,9924163-9924338,9924437-9924495, 9924952-9924984,9925060-9925185 Length = 158 Score = 39.1 bits (87), Expect = 0.003 Identities = 16/48 (33%), Positives = 26/48 (54%) Frame = +3 Query: 312 KVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSSEYNGPRESNGIVKYM 455 +VDC K C + + YPT K+F +GE ++Y GPR + ++ Sbjct: 97 QVDCGVS-KPVCSKVDIHSYPTFKVFYEGEEVAKYKGPRNVESLKNFV 143 Score = 30.3 bits (65), Expect = 1.5 Identities = 15/46 (32%), Positives = 20/46 (43%), Gaps = 1/46 (2%) Frame = +2 Query: 116 IIYLCKAAEEDVLDLTDSDFSAVLSQHDTA-LVMFYAPWCGHCKRL 250 +I L + D + D + + DT V F PWC HCK L Sbjct: 31 VITLTEETFSDKITEVDRARRVQIKEKDTVWFVKFCVPWCKHCKNL 76 >07_03_0651 + 20287661-20287701,20288034-20288124,20288737-20288831, 20289433-20289523,20290066-20290250,20290590-20290647, 20290812-20290852,20290935-20291009,20292298-20292354, 20292480-20292546,20292754-20292900,20292986-20293210, 20293332-20293493,20293570-20293647,20293735-20293812 Length = 496 Score = 37.9 bits (84), Expect = 0.007 Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 11/75 (14%) Frame = +3 Query: 312 KVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSSE---------YNGPRESNGIVKYMRAQ 464 KVDCTE C + + GYP+++IFRKG E Y G R++ +V M Sbjct: 214 KVDCTEE-IDLCRRHHIQGYPSIRIFRKGSDLKENQGHHDHESYYGDRDTESLVAAMETY 272 Query: 465 VG--PSSKELLTVAD 503 V P +L + D Sbjct: 273 VANIPKDAHVLALED 287 Score = 33.1 bits (72), Expect = 0.21 Identities = 14/40 (35%), Positives = 22/40 (55%) Frame = +2 Query: 140 EEDVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKQS 259 ++ + L+ +F + Q+ +V FYAPWC RLK S Sbjct: 151 DDGSVPLSSRNFDSYSHQYPVLVVNFYAPWCYWSNRLKPS 190 >01_06_1771 + 39787895-39788223,39788419-39788518,39788640-39788774 Length = 187 Score = 32.7 bits (71), Expect = 0.28 Identities = 12/39 (30%), Positives = 21/39 (53%) Frame = +3 Query: 312 KVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSSEYNGPR 428 K+DC + KS ++ + PT KI + G++ E G + Sbjct: 135 KLDCNQDNKSLAKELGIKVVPTFKILKDGKVVKEVTGAK 173 >07_03_0550 - 19356710-19357763,19358941-19359256,19359552-19359609 Length = 475 Score = 30.7 bits (66), Expect = 1.1 Identities = 17/51 (33%), Positives = 28/51 (54%) Frame = +2 Query: 113 GIIYLCKAAEEDVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKQSTL 265 G++ L +A E++L L S+ + LV+ YAPWC C+ ++ S L Sbjct: 362 GVVSLTRAGVENLLRLE--------SRAEPWLVVLYAPWCPFCQAMEASYL 404 >02_05_0085 - 25697860-25698142,25698631-25698946,25700481-25700518, 25700955-25701036,25701815-25702016 Length = 306 Score = 29.9 bits (64), Expect = 2.0 Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 1/35 (2%) Frame = +2 Query: 149 VLDLTDSDFSAVLSQHDT-ALVMFYAPWCGHCKRL 250 V D+T S + +++ + + LV F+A WCG CK + Sbjct: 108 VPDVTKSTWQSLVVESELPVLVEFWASWCGPCKMI 142 >04_04_1575 + 34548774-34549109,34549979-34550185 Length = 180 Score = 27.9 bits (59), Expect = 8.0 Identities = 13/27 (48%), Positives = 16/27 (59%), Gaps = 1/27 (3%) Frame = +2 Query: 167 SDFSAVLSQHDT-ALVMFYAPWCGHCK 244 S+F A + Q D LV F A WCG C+ Sbjct: 75 SEFEAEVLQSDLPVLVDFVADWCGPCR 101 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 18,106,696 Number of Sequences: 37544 Number of extensions: 356935 Number of successful extensions: 849 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 799 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 844 length of database: 14,793,348 effective HSP length: 80 effective length of database: 11,789,828 effective search space used: 1744894544 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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