Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30714
(687 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_01_0618 - 4941906-4942118,4942231-4942343,4942534-4942651,494... 66 2e-11
05_01_0410 - 3234455-3234466,3234851-3234950,3235037-3235161,323... 55 6e-08
04_03_1011 - 21708503-21708544,21708689-21708898,21709000-217091... 54 1e-07
02_04_0214 - 20976977-20977171,20977499-20977611,20978041-209781... 52 6e-07
01_03_0161 + 13337265-13337297,13337880-13338017,13338211-133383... 50 2e-06
04_03_0988 - 21469811-21469831,21470823-21471047,21471327-214716... 49 3e-06
02_04_0182 + 20719782-20720033,20720502-20720605,20720693-207210... 47 2e-05
09_04_0345 + 16876489-16876614,16876718-16876876,16877989-168781... 42 6e-04
02_01_0001 - 3864-4049,4861-4917,5514-5648,5710-5808,5884-5952,6... 42 6e-04
03_02_0621 - 9923163-9923245,9924163-9924338,9924437-9924495,992... 39 0.003
07_03_0651 + 20287661-20287701,20288034-20288124,20288737-202888... 38 0.007
01_06_1771 + 39787895-39788223,39788419-39788518,39788640-39788774 33 0.28
07_03_0550 - 19356710-19357763,19358941-19359256,19359552-19359609 31 1.1
02_05_0085 - 25697860-25698142,25698631-25698946,25700481-257005... 30 2.0
04_04_1575 + 34548774-34549109,34549979-34550185 28 8.0
>11_01_0618 -
4941906-4942118,4942231-4942343,4942534-4942651,
4942762-4942881,4942964-4943101,4943392-4943517,
4943659-4943847,4943951-4944238,4944344-4944374,
4945014-4945216
Length = 512
Score = 66.5 bits (155), Expect = 2e-11
Identities = 32/66 (48%), Positives = 45/66 (68%), Gaps = 2/66 (3%)
Frame = +3
Query: 312 KVDCT-EGGKSTCEQFSVSGYPTLKIFR-KGELSSEYNGPRESNGIVKYMRAQVGPSSKE 485
KVD E K ++ + G+PTLKIFR +G+ EY GPRE+ GIV+Y++ QVGP+SKE
Sbjct: 97 KVDANDEKNKPLATKYEIQGFPTLKIFRNQGKNIQEYKGPREAEGIVEYLKKQVGPASKE 156
Query: 486 LLTVAD 503
+ + D
Sbjct: 157 IKSPED 162
Score = 48.4 bits (110), Expect = 5e-06
Identities = 20/39 (51%), Positives = 25/39 (64%)
Frame = +2
Query: 134 AAEEDVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRL 250
AA E VL L F +++H +V FYAPWCGHCK+L
Sbjct: 37 AAAEAVLTLDADGFDEAVAKHPFMVVEFYAPWCGHCKKL 75
Score = 39.1 bits (87), Expect = 0.003
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = +2
Query: 158 LTDSDFSAVLSQHDTALVMFYAPWCGHCKRL 250
+ D+ V LV FYAPWCGHCK+L
Sbjct: 390 VADNVHDFVFKSGKNVLVEFYAPWCGHCKKL 420
>05_01_0410 -
3234455-3234466,3234851-3234950,3235037-3235161,
3235244-3235400,3235644-3235735,3235828-3235855,
3235949-3236066,3236411-3236466,3236556-3236653,
3236864-3236948,3237428-3237600
Length = 347
Score = 54.8 bits (126), Expect = 6e-08
Identities = 23/39 (58%), Positives = 28/39 (71%)
Frame = +2
Query: 134 AAEEDVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRL 250
A+ +DVL LT+S F + Q ALV FYAPWCGHCK+L
Sbjct: 27 ASADDVLALTESTFEKEVGQDRAALVEFYAPWCGHCKKL 65
Score = 50.0 bits (114), Expect = 2e-06
Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 9/79 (11%)
Frame = +3
Query: 312 KVDCTEGGKSTCEQFSVSGYPTLKIFRKGELS-SEYNGPRESNGIVKYMRAQVG------ 470
KVDC E KS C ++ VSGYPT++ F KG L +Y G R + + +Y+ ++
Sbjct: 86 KVDCDEH-KSVCSKYGVSGYPTIQWFPKGSLEPKKYEGQRTAEALAEYVNSEAATNVKIA 144
Query: 471 --PSSKELLTVADFELLLL 521
PSS +LT F+ ++L
Sbjct: 145 AVPSSVVVLTPETFDSVVL 163
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/40 (52%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +2
Query: 134 AAEEDVLDLTDSDF-SAVLSQHDTALVMFYAPWCGHCKRL 250
A V+ LT F S VL + LV FYAPWCGHCK L
Sbjct: 145 AVPSSVVVLTPETFDSVVLDETKDVLVEFYAPWCGHCKHL 184
Score = 43.2 bits (97), Expect = 2e-04
Identities = 24/52 (46%), Positives = 33/52 (63%), Gaps = 3/52 (5%)
Frame = +3
Query: 348 EQFSVSGYPTLKIFRKGELSSE-YNGPRESNGIVKYMRAQVGPS--SKELLT 494
E++ VSG+PTLK F KG + E Y+G RE + VK++ + G S SK LT
Sbjct: 216 EKYGVSGFPTLKFFPKGNKAGEDYDGGRELDDFVKFINEKCGTSRDSKGQLT 267
>04_03_1011 -
21708503-21708544,21708689-21708898,21709000-21709112,
21709232-21709349,21709386-21709412,21709671-21709808,
21710069-21710194,21710279-21710467,21710598-21710885,
21710937-21711024,21711120-21711298
Length = 505
Score = 54.0 bits (124), Expect = 1e-07
Identities = 27/61 (44%), Positives = 39/61 (63%), Gaps = 2/61 (3%)
Frame = +3
Query: 312 KVDC-TEGGKSTCEQFSVSGYPTLKIFRKGELSSE-YNGPRESNGIVKYMRAQVGPSSKE 485
KVD E K +++ V YPT+KI + G Y GPRE++GIV+Y++ QVGP+S +
Sbjct: 108 KVDAYNERNKELKDKYGVYSYPTIKIMKNGGSDVRGYGGPREADGIVEYLKRQVGPASLK 167
Query: 486 L 488
L
Sbjct: 168 L 168
Score = 50.0 bits (114), Expect = 2e-06
Identities = 20/37 (54%), Positives = 27/37 (72%)
Frame = +2
Query: 140 EEDVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRL 250
+E VL L +FS V+++H +V FYAPWCGHCK+L
Sbjct: 31 KEAVLTLDAGNFSEVVAKHPFIVVKFYAPWCGHCKQL 67
Score = 35.1 bits (77), Expect = 0.053
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +2
Query: 158 LTDSDFSAVLSQHDTALVMFYAPWCGHCKR 247
+ D+ V + L+ FYAPWCGHC++
Sbjct: 370 VADNIDDIVFNSGKNVLLEFYAPWCGHCRK 399
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +3
Query: 354 FSVSGYPTLKIFRKGELSSEYNGPRESNGIVKYMRAQVGPSS 479
F+V GYPT+ + Y+G R + I+ ++ GP +
Sbjct: 433 FTVEGYPTIYFYSSSGNLLSYDGARTAEEIISFINENRGPKA 474
>02_04_0214 -
20976977-20977171,20977499-20977611,20978041-20978158,
20978585-20978701,20978836-20978973,20979193-20979318,
20979827-20980015,20980539-20980863,20980977-20981134
Length = 492
Score = 51.6 bits (118), Expect = 6e-07
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Frame = +3
Query: 312 KVDCTEG-GKSTCEQFSVSGYPTLKIFR-KGELSSEYNGPRESNGIVKYMRAQVGPSSKE 485
KVD + + + V GYPT++I R +G S Y GPR++ GIV Y++ Q GP+S E
Sbjct: 82 KVDASADLNRGLAGEHGVQGYPTIRILRDRGARSHNYAGPRDAAGIVAYLKRQAGPASVE 141
Query: 486 LLTVA 500
+ A
Sbjct: 142 IAASA 146
Score = 49.6 bits (113), Expect = 2e-06
Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Frame = +2
Query: 80 MFGSLKFVLLLGIIYLCKAAE---EDVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRL 250
M S F ++ L +A E VL L +F+ V+ HD +V FYAPWCGHC +L
Sbjct: 1 MASSTAFAAAFALLLLASSAAAEGEAVLTLDAGNFTEVVGAHDFIVVEFYAPWCGHCNQL 60
Score = 36.3 bits (80), Expect = 0.023
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2
Query: 158 LTDSDFSAVLSQHDTALVMFYAPWCGHCKRL 250
+ D+ V + L+ FYAPWCGHC++L
Sbjct: 376 VADNLREVVFNSGKNVLLEFYAPWCGHCQKL 406
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = +2
Query: 518 SKDEVVVVGFFEKESDLKGE-FLKTADKLREEVTFAHSSANEVLEK 652
+ D VVVVG F + S + E F+ A+K+R + F H++ VL +
Sbjct: 155 ANDGVVVVGVFPELSGSEFESFMAVAEKMRADYDFRHTTDAGVLPR 200
>01_03_0161 +
13337265-13337297,13337880-13338017,13338211-13338308,
13338395-13338450,13338664-13338781,13338889-13338916,
13339021-13339112,13339321-13339477,13339569-13339693,
13339785-13339884,13339991-13340059
Length = 337
Score = 49.6 bits (113), Expect = 2e-06
Identities = 26/70 (37%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Frame = +3
Query: 312 KVDCTEGGKSTCEQFSVSGYPTLKIFRKGELS-SEYNGPRESNGIVKYMRAQVGPSSKEL 488
KVDC E KS C ++ VSGYPT++ F KG L +Y G R + + +++ + G + K L
Sbjct: 57 KVDCDEH-KSVCSKYGVSGYPTIQWFPKGSLEPKKYEGQRSAEALAEFVNTEGGTNVK-L 114
Query: 489 LTVADFELLL 518
T+ ++L
Sbjct: 115 ATIPSSVVVL 124
Score = 46.0 bits (104), Expect = 3e-05
Identities = 22/48 (45%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Frame = +3
Query: 336 KSTCEQFSVSGYPTLKIFRKGELSSE-YNGPRESNGIVKYMRAQVGPS 476
K E++ VSGYPTLK F KG + E Y+G RE + VK++ + G S
Sbjct: 183 KDLAEKYGVSGYPTLKFFPKGNKAGEDYDGGRELDDFVKFINEKCGTS 230
Score = 41.9 bits (94), Expect = 5e-04
Identities = 17/29 (58%), Positives = 20/29 (68%)
Frame = +2
Query: 164 DSDFSAVLSQHDTALVMFYAPWCGHCKRL 250
D+ S VL ++ LV FYAPWCGHCK L
Sbjct: 127 DNFDSIVLDENKDILVEFYAPWCGHCKHL 155
>04_03_0988 -
21469811-21469831,21470823-21471047,21471327-21471634,
21471864-21472234,21472327-21472430,21473086-21473325
Length = 422
Score = 49.2 bits (112), Expect = 3e-06
Identities = 20/34 (58%), Positives = 23/34 (67%)
Frame = +2
Query: 149 VLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRL 250
V++L +S F A L D V FYAPWCGHCKRL
Sbjct: 44 VIELDESSFEAALGAIDYLFVDFYAPWCGHCKRL 77
>02_04_0182 +
20719782-20720033,20720502-20720605,20720693-20721066,
20721302-20721609,20721853-20722092
Length = 425
Score = 46.8 bits (106), Expect = 2e-05
Identities = 19/34 (55%), Positives = 22/34 (64%)
Frame = +2
Query: 149 VLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRL 250
VL+L D +F A + V FYAPWCGHCKRL
Sbjct: 48 VLELDDGNFDAAVRAAGLLFVDFYAPWCGHCKRL 81
>09_04_0345 +
16876489-16876614,16876718-16876876,16877989-16878102,
16878701-16878882,16879142-16879241,16879597-16879638,
16879818-16879994,16880084-16880175,16880633-16880779,
16880832-16881036
Length = 447
Score = 41.5 bits (93), Expect = 6e-04
Identities = 18/40 (45%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Frame = +2
Query: 134 AAEEDVLDLTDSDF-SAVLSQHDTALVMFYAPWCGHCKRL 250
+A VL ++F S VL+ + LV F+APWCGHC++L
Sbjct: 26 SAGSPVLQFNPNNFKSKVLNSNGVVLVEFFAPWCGHCQQL 65
Score = 38.7 bits (86), Expect = 0.004
Identities = 14/34 (41%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Frame = +2
Query: 152 LDLTDSDFSAVLSQH-DTALVMFYAPWCGHCKRL 250
++L +F ++++ D +V F+APWCGHCK+L
Sbjct: 168 IELNSQNFDKLVTKSKDLWIVEFFAPWCGHCKKL 201
Score = 37.5 bits (83), Expect = 0.010
Identities = 14/44 (31%), Positives = 27/44 (61%)
Frame = +3
Query: 336 KSTCEQFSVSGYPTLKIFRKGELSSEYNGPRESNGIVKYMRAQV 467
K +++ + G+PT+K+F G+ +Y G R+ IV++ +QV
Sbjct: 91 KELAQEYGIRGFPTIKVFVPGKPPVDYQGARDVKPIVEFALSQV 134
>02_01_0001 -
3864-4049,4861-4917,5514-5648,5710-5808,5884-5952,
6419-6493,6619-6705,6873-6953,7021-7163,7262-7430,
7538-7667,7753-8255
Length = 577
Score = 41.5 bits (93), Expect = 6e-04
Identities = 17/37 (45%), Positives = 23/37 (62%)
Frame = +2
Query: 140 EEDVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRL 250
E V L+ ++FS L+ H +V FYAPWC HC+ L
Sbjct: 72 ETHVFLLSAANFSDFLASHRHVMVEFYAPWCAHCQAL 108
Score = 31.1 bits (67), Expect = 0.86
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = +2
Query: 218 YAPWCGHCKRLK 253
YAPWCGHC+ L+
Sbjct: 454 YAPWCGHCQELE 465
>03_02_0621 -
9923163-9923245,9924163-9924338,9924437-9924495,
9924952-9924984,9925060-9925185
Length = 158
Score = 39.1 bits (87), Expect = 0.003
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +3
Query: 312 KVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSSEYNGPRESNGIVKYM 455
+VDC K C + + YPT K+F +GE ++Y GPR + ++
Sbjct: 97 QVDCGVS-KPVCSKVDIHSYPTFKVFYEGEEVAKYKGPRNVESLKNFV 143
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/46 (32%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Frame = +2
Query: 116 IIYLCKAAEEDVLDLTDSDFSAVLSQHDTA-LVMFYAPWCGHCKRL 250
+I L + D + D + + DT V F PWC HCK L
Sbjct: 31 VITLTEETFSDKITEVDRARRVQIKEKDTVWFVKFCVPWCKHCKNL 76
>07_03_0651 +
20287661-20287701,20288034-20288124,20288737-20288831,
20289433-20289523,20290066-20290250,20290590-20290647,
20290812-20290852,20290935-20291009,20292298-20292354,
20292480-20292546,20292754-20292900,20292986-20293210,
20293332-20293493,20293570-20293647,20293735-20293812
Length = 496
Score = 37.9 bits (84), Expect = 0.007
Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 11/75 (14%)
Frame = +3
Query: 312 KVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSSE---------YNGPRESNGIVKYMRAQ 464
KVDCTE C + + GYP+++IFRKG E Y G R++ +V M
Sbjct: 214 KVDCTEE-IDLCRRHHIQGYPSIRIFRKGSDLKENQGHHDHESYYGDRDTESLVAAMETY 272
Query: 465 VG--PSSKELLTVAD 503
V P +L + D
Sbjct: 273 VANIPKDAHVLALED 287
Score = 33.1 bits (72), Expect = 0.21
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +2
Query: 140 EEDVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKQS 259
++ + L+ +F + Q+ +V FYAPWC RLK S
Sbjct: 151 DDGSVPLSSRNFDSYSHQYPVLVVNFYAPWCYWSNRLKPS 190
>01_06_1771 + 39787895-39788223,39788419-39788518,39788640-39788774
Length = 187
Score = 32.7 bits (71), Expect = 0.28
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +3
Query: 312 KVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSSEYNGPR 428
K+DC + KS ++ + PT KI + G++ E G +
Sbjct: 135 KLDCNQDNKSLAKELGIKVVPTFKILKDGKVVKEVTGAK 173
>07_03_0550 - 19356710-19357763,19358941-19359256,19359552-19359609
Length = 475
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = +2
Query: 113 GIIYLCKAAEEDVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKQSTL 265
G++ L +A E++L L S+ + LV+ YAPWC C+ ++ S L
Sbjct: 362 GVVSLTRAGVENLLRLE--------SRAEPWLVVLYAPWCPFCQAMEASYL 404
>02_05_0085 -
25697860-25698142,25698631-25698946,25700481-25700518,
25700955-25701036,25701815-25702016
Length = 306
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +2
Query: 149 VLDLTDSDFSAVLSQHDT-ALVMFYAPWCGHCKRL 250
V D+T S + +++ + + LV F+A WCG CK +
Sbjct: 108 VPDVTKSTWQSLVVESELPVLVEFWASWCGPCKMI 142
>04_04_1575 + 34548774-34549109,34549979-34550185
Length = 180
Score = 27.9 bits (59), Expect = 8.0
Identities = 13/27 (48%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = +2
Query: 167 SDFSAVLSQHDT-ALVMFYAPWCGHCK 244
S+F A + Q D LV F A WCG C+
Sbjct: 75 SEFEAEVLQSDLPVLVDFVADWCGPCR 101
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,106,696
Number of Sequences: 37544
Number of extensions: 356935
Number of successful extensions: 849
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 799
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 844
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1744894544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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