Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30714
(687 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_35157| Best HMM Match : Thioredoxin (HMM E-Value=0) 99 3e-21
SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 3e-10
SB_20276| Best HMM Match : Thioredoxin (HMM E-Value=9.8e-06) 55 5e-08
SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0) 53 2e-07
SB_30398| Best HMM Match : Thioredoxin (HMM E-Value=0) 52 3e-07
SB_46929| Best HMM Match : Thioredoxin (HMM E-Value=0) 52 4e-07
SB_30498| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 6e-07
SB_59094| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 1e-06
SB_45978| Best HMM Match : Thioredoxin (HMM E-Value=4.19997e-41) 50 2e-06
SB_3640| Best HMM Match : Thioredoxin (HMM E-Value=4.3e-33) 48 5e-06
SB_17740| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-27) 48 9e-06
SB_30496| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 2e-05
SB_5372| Best HMM Match : ER_lumen_recept (HMM E-Value=2.5e-19) 38 0.010
SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.023
SB_55398| Best HMM Match : Thioredoxin (HMM E-Value=3.6e-21) 33 0.16
SB_25332| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.16
SB_49513| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-19) 33 0.22
SB_14273| Best HMM Match : DUF1000 (HMM E-Value=0) 32 0.38
SB_38445| Best HMM Match : ERp29 (HMM E-Value=2.2e-19) 31 0.66
SB_218| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.66
SB_2701| Best HMM Match : Thioredoxin (HMM E-Value=4.8e-05) 31 0.87
SB_28181| Best HMM Match : RVP (HMM E-Value=0.00058) 30 1.5
SB_44156| Best HMM Match : Extensin_2 (HMM E-Value=0.05) 29 2.7
SB_14715| Best HMM Match : Baculo_PEP_C (HMM E-Value=0.0024) 29 3.5
SB_38688| Best HMM Match : TP901-1_ORF40 (HMM E-Value=1.7) 28 6.2
SB_35625| Best HMM Match : DUF296 (HMM E-Value=0.0053) 28 6.2
SB_2957| Best HMM Match : zf-HYPF (HMM E-Value=3.1) 28 6.2
SB_51588| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_44457| Best HMM Match : Thioredoxin (HMM E-Value=2.2e-07) 28 8.1
SB_4400| Best HMM Match : Borrelia_P13 (HMM E-Value=1.6) 28 8.1
>SB_35157| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 1056
Score = 99.1 bits (236), Expect = 3e-21
Identities = 41/66 (62%), Positives = 53/66 (80%)
Frame = +3
Query: 312 KVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSSEYNGPRESNGIVKYMRAQVGPSSKELL 491
KVDCTE GK TC ++ VSGYPTLKIFR GE+S +Y+GPR+S+GI++YM+ Q GPSS E+
Sbjct: 595 KVDCTEAGKDTCSKYGVSGYPTLKIFRNGEMSKDYDGPRDSSGIIRYMKKQAGPSSVEIK 654
Query: 492 TVADFE 509
+V E
Sbjct: 655 SVDHLE 660
Score = 62.5 bits (145), Expect = 3e-10
Identities = 25/51 (49%), Positives = 39/51 (76%)
Frame = +2
Query: 533 VVVGFFEKESDLKGEFLKTADKLREEVTFAHSSANEVLEKTGYKNNVVLYR 685
VVVGF + + DLK F++TA+++R+ +FAH+S +VLEK YKN +V++R
Sbjct: 670 VVVGFLDGDDDLKNAFMRTANEMRDSFSFAHASVTDVLEKYNYKNQIVVFR 720
Score = 55.2 bits (127), Expect = 5e-08
Identities = 22/45 (48%), Positives = 31/45 (68%)
Frame = +2
Query: 116 IIYLCKAAEEDVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRL 250
++++ DVLDL DS+F + ++ D LV F+APWCGHCKRL
Sbjct: 529 LLFVGSTLSSDVLDLGDSNFKSGVAGKDIMLVEFFAPWCGHCKRL 573
Score = 51.2 bits (117), Expect = 8e-07
Identities = 22/61 (36%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Frame = +3
Query: 309 TKVDCTEGGKSTCE-QFSVSGYPTLKIFRKGELSSEYNGPRESNGIVKYMRAQVGPSSKE 485
T +DC G++TC +F + +PTLK+FR G+ +Y GP+++ + Y+ Q+G K
Sbjct: 432 TFMDCFGAGRATCYYRFGIHQWPTLKLFRYGQPWGDYTGPQDTASLESYIHDQLGDGKKR 491
Query: 486 L 488
L
Sbjct: 492 L 492
Score = 36.7 bits (81), Expect = 0.018
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = +2
Query: 206 LVMFYAPWCGHCKRLK 253
L+ FYAPWCGHCK L+
Sbjct: 884 LIEFYAPWCGHCKSLE 899
>SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 645
Score = 62.5 bits (145), Expect = 3e-10
Identities = 30/56 (53%), Positives = 40/56 (71%), Gaps = 3/56 (5%)
Frame = +3
Query: 348 EQFSVSGYPTLKIFRKGELSSEYNGPRESNGIVKYMRAQVGPSSK---ELLTVADF 506
+++ V GYPTLK+FRKG+ ++EY G R+ GI YMR+QVGPSS+ L V DF
Sbjct: 244 QKYEVQGYPTLKVFRKGK-ATEYKGQRDQYGIASYMRSQVGPSSRILSSLKAVQDF 298
Score = 60.9 bits (141), Expect = 9e-10
Identities = 31/57 (54%), Positives = 38/57 (66%)
Frame = +3
Query: 312 KVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSSEYNGPRESNGIVKYMRAQVGPSSK 482
K+D T ++F VSGYPTLKIFRKG EY GPRE +GIV+YM+ Q P+ K
Sbjct: 118 KMDATVAS-DIAQRFDVSGYPTLKIFRKG-TPYEYEGPREESGIVEYMKKQSDPNWK 172
Score = 48.8 bits (111), Expect = 4e-06
Identities = 19/37 (51%), Positives = 25/37 (67%)
Frame = +2
Query: 140 EEDVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRL 250
E+DV L +F V+ +++ LV FYAPWCGHCK L
Sbjct: 60 EDDVSVLNSKNFDRVIEENNIILVEFYAPWCGHCKSL 96
Score = 45.2 bits (102), Expect = 5e-05
Identities = 17/33 (51%), Positives = 24/33 (72%)
Frame = +2
Query: 152 LDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRL 250
L LT +F+ V+++ LV F+APWCGHCK+L
Sbjct: 179 LTLTKENFTEVVNRESLMLVEFFAPWCGHCKQL 211
Score = 34.3 bits (75), Expect = 0.094
Identities = 17/57 (29%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Frame = +2
Query: 521 KDEVVVVGFFEKESD-LKGEFLKTADKLREEVTFAHSSANEVLEKTGY-KNNVVLYR 685
KD+V ++GFF+ E D + +L+ + +R++ FAH+ + G K+++VL++
Sbjct: 302 KDDVTIMGFFDGEDDKMLESYLEANNDVRDDYPFAHTFDAAAKKHFGIKKSSIVLFQ 358
Score = 27.9 bits (59), Expect = 8.1
Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +2
Query: 131 KAAEEDVLDLTDSDFSAVLSQ-HDTALVMFYAPWCG 235
K+ +E V + F +++ L+ FYAPWCG
Sbjct: 521 KSNKEPVTVVVGKTFDEIVNDPKKDVLIEFYAPWCG 556
>SB_20276| Best HMM Match : Thioredoxin (HMM E-Value=9.8e-06)
Length = 70
Score = 55.2 bits (127), Expect = 5e-08
Identities = 22/45 (48%), Positives = 31/45 (68%)
Frame = +2
Query: 116 IIYLCKAAEEDVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRL 250
++++ DVLDL DS+F + ++ D LV F+APWCGHCKRL
Sbjct: 4 LLFVGSTLSSDVLDLGDSNFKSGVAGKDIMLVEFFAPWCGHCKRL 48
>SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 536
Score = 53.2 bits (122), Expect = 2e-07
Identities = 26/54 (48%), Positives = 34/54 (62%), Gaps = 4/54 (7%)
Frame = +2
Query: 101 VLLLGIIYLCKAAE----EDVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRL 250
VLLL ++ L + E EDVL LT+ +F ++ + LV FYAPWCGHCK L
Sbjct: 6 VLLLALVSLAYSEEIKEEEDVLVLTEKNFDEAVAANKHVLVEFYAPWCGHCKAL 59
Score = 50.0 bits (114), Expect = 2e-06
Identities = 27/61 (44%), Positives = 37/61 (60%)
Frame = +3
Query: 312 KVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSSEYNGPRESNGIVKYMRAQVGPSSKELL 491
KVD T K E+F V GYPT+K F+ G+ SEY G R + IV ++ + GP +K+L
Sbjct: 81 KVDATAETKLG-EKFQVQGYPTIKFFKDGK-PSEYAGGRTAPEIVSWLNKKTGPPAKDLA 138
Query: 492 T 494
T
Sbjct: 139 T 139
Score = 37.5 bits (83), Expect = 0.010
Identities = 16/32 (50%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = +2
Query: 158 LTDSDFSAVLSQHD-TALVMFYAPWCGHCKRL 250
L +F V D V FYAPWCGHCK+L
Sbjct: 389 LCGKNFDEVARNKDKNVFVEFYAPWCGHCKQL 420
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +3
Query: 348 EQFSVSGYPTLKIFRKGELSSEYNGPRESNGIVKYMRA 461
E V +PT+K F K + +YNG R + VK++ +
Sbjct: 450 EGVKVHSFPTIKYFPKEGEAVDYNGGRTLDDFVKFLES 487
>SB_30398| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 295
Score = 52.4 bits (120), Expect = 3e-07
Identities = 24/55 (43%), Positives = 34/55 (61%)
Frame = +2
Query: 86 GSLKFVLLLGIIYLCKAAEEDVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRL 250
G++ F L L + + + V+DLT +F V++ ALV FYAPWCGHCK+L
Sbjct: 4 GTVLFKLFL-LFSISSLTQGKVIDLTKDNFDEVVNGEKFALVEFYAPWCGHCKQL 57
Score = 44.8 bits (101), Expect = 7e-05
Identities = 21/54 (38%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Frame = +3
Query: 312 KVDCTEGGKSTCEQFSVSGYPTLKIFRKGELS-SEYNGPRESNGIVKYMRAQVG 470
KVD +G + +F V G+PT+K F KG + EYNG R+ N +K++ + G
Sbjct: 78 KVDA-DGDRDLGSRFDVKGFPTIKYFPKGSTTPEEYNGGRDINDFIKFIEEKTG 130
>SB_46929| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 362
Score = 52.0 bits (119), Expect = 4e-07
Identities = 22/38 (57%), Positives = 30/38 (78%), Gaps = 1/38 (2%)
Frame = +2
Query: 140 EEDVLDLTDSDFSA-VLSQHDTALVMFYAPWCGHCKRL 250
+EDV++LTD++F VL+ D LV F+APWCGHC+RL
Sbjct: 78 KEDVVELTDTNFEKEVLNSKDLWLVEFFAPWCGHCQRL 115
Score = 33.9 bits (74), Expect = 0.12
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 4/41 (9%)
Frame = +3
Query: 342 TCEQFSVSGYPTLKIFRKGELSS----EYNGPRESNGIVKY 452
T ++ V GYPT+K+F G +S +Y G R ++ I++Y
Sbjct: 143 TASRYQVQGYPTIKVFAAGIKNSHSVEDYQGGRTASDIIQY 183
Score = 32.7 bits (71), Expect = 0.29
Identities = 14/32 (43%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = +3
Query: 354 FSVSGYPTLKIFRKGELS-SEYNGPRESNGIV 446
+++ G+PT+KIF + S +YNG R + GIV
Sbjct: 11 YNIRGFPTIKIFGANKNSPQDYNGQRTAQGIV 42
>SB_30498| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 564
Score = 51.6 bits (118), Expect = 6e-07
Identities = 21/59 (35%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Frame = +3
Query: 312 KVDCTEG-GKSTCEQFSVSGYPTLKIFRKGELSSEYNGPRESNGIVKYMRAQVGPSSKE 485
KVDCT+ K C+ F + GYP++K+F+ G+ + +Y G R +V YM + +S++
Sbjct: 76 KVDCTDPRSKVLCDNFKIEGYPSVKLFKFGKYAGDYIGQRTDAALVNYMESVTSTASQQ 134
Score = 41.5 bits (93), Expect = 6e-04
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = +2
Query: 149 VLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRL 250
V DL +F ++ + D LV FYAPWC HC+ L
Sbjct: 22 VYDLNAQNFDQMIREKDIMLVDFYAPWCHHCQEL 55
>SB_59094| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 50.4 bits (115), Expect = 1e-06
Identities = 21/59 (35%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Frame = +3
Query: 315 VDCTEGGKSTCE-QFSVSGYPTLKIFRKGELSSEYNGPRESNGIVKYMRAQVGPSSKEL 488
+DC G++TC +F + +PTLK+FR G+ +Y GP+++ + Y+ Q+G K L
Sbjct: 237 MDCFGAGRATCYYRFGIHQWPTLKLFRYGQPWGDYTGPQDTASLESYIHDQLGDGKKRL 295
>SB_45978| Best HMM Match : Thioredoxin (HMM E-Value=4.19997e-41)
Length = 271
Score = 50.0 bits (114), Expect = 2e-06
Identities = 24/43 (55%), Positives = 27/43 (62%), Gaps = 3/43 (6%)
Frame = +2
Query: 134 AAEED---VLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRLK 253
+AEED V L SDF L+ + LVMFYAPWCGHCK K
Sbjct: 141 SAEEDSSLVKQLDGSDFWGYLNNTEHVLVMFYAPWCGHCKNAK 183
Score = 47.2 bits (107), Expect = 1e-05
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +2
Query: 140 EEDVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRLK 253
+ V+ LTD + H+ LVM++APWCGHC +K
Sbjct: 49 DSKVVFLTDESHDEFIKSHENVLVMYFAPWCGHCNEMK 86
Score = 44.8 bits (101), Expect = 7e-05
Identities = 21/62 (33%), Positives = 35/62 (56%)
Frame = +3
Query: 294 PSGGATKVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSSEYNGPRESNGIVKYMRAQVGP 473
P+ K+DCT+ G C++ V+GYPTL+ + G+ EY+G R + ++ +M P
Sbjct: 197 PNRVFAKLDCTKFG-DVCDKEEVNGYPTLRYYLYGKFVVEYDGDRVTEDLISFMEEPPLP 255
Query: 474 SS 479
S
Sbjct: 256 LS 257
Score = 33.1 bits (72), Expect = 0.22
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = +3
Query: 300 GGATKVDCTEGGKSTCEQFSVSGYPT 377
G VDCTE K+TC Q + GYPT
Sbjct: 18 GALAAVDCTES-KNTCNQRDIKGYPT 42
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/47 (29%), Positives = 29/47 (61%)
Frame = +3
Query: 315 VDCTEGGKSTCEQFSVSGYPTLKIFRKGELSSEYNGPRESNGIVKYM 455
VDCT+ K ++ +++GYPT+K++ K +++ E + +VK +
Sbjct: 108 VDCTKH-KDVAKKVALAGYPTVKLY-KASNTAKAASAEEDSSLVKQL 152
>SB_3640| Best HMM Match : Thioredoxin (HMM E-Value=4.3e-33)
Length = 386
Score = 48.4 bits (110), Expect = 5e-06
Identities = 18/36 (50%), Positives = 26/36 (72%)
Frame = +2
Query: 146 DVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRLK 253
+V+ L D F ++++ + LVMFYAPWCGHCK +K
Sbjct: 83 EVVHLRDDMFDDFVAKNPSVLVMFYAPWCGHCKAMK 118
Score = 48.4 bits (110), Expect = 5e-06
Identities = 18/36 (50%), Positives = 25/36 (69%)
Frame = +2
Query: 146 DVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRLK 253
+V L+D+ F + + + LVMFYAPWCGHCK+ K
Sbjct: 196 EVYHLSDTTFKSFVKKKKHVLVMFYAPWCGHCKKAK 231
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +2
Query: 146 DVLDLTDSDFSAVLSQHDTALVMFYAP 226
+V LT F L D+ LVMFYAP
Sbjct: 335 NVQHLTQDTFDEALKTFDSILVMFYAP 361
>SB_17740| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-27)
Length = 472
Score = 47.6 bits (108), Expect = 9e-06
Identities = 18/37 (48%), Positives = 25/37 (67%)
Frame = +2
Query: 140 EEDVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRL 250
E +L+L DS+F + +H LV FYAPWC HCK++
Sbjct: 133 EPTLLELDDSNFEPAVQKHKFVLVDFYAPWCFHCKKM 169
Score = 43.6 bits (98), Expect = 2e-04
Identities = 17/38 (44%), Positives = 25/38 (65%)
Frame = +2
Query: 137 AEEDVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRL 250
A VL+L D +F+ + +++ LV FYAPWC C+RL
Sbjct: 49 ASPAVLNLNDQNFNETIKKNEYVLVDFYAPWCSDCQRL 86
Score = 34.3 bits (75), Expect = 0.094
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
Frame = +3
Query: 312 KVDCTEGG---KSTCEQFSVSGYPTLKIFRKGELSSEYNGPRESNGIVK 449
KVDC+ K TC++++V PT+ +F G+ E+ G + +K
Sbjct: 192 KVDCSANNMATKKTCKKYNVKFLPTIYLFHDGKFVEEFEGNNRNKKSIK 240
>SB_30496| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 488
Score = 46.8 bits (106), Expect = 2e-05
Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Frame = +2
Query: 89 SLKFVLLLGIIYLCKAAEED-VLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRLK 253
++ FV+ L +I A +E+ + +LTD DF L + LV FYAPWC C L+
Sbjct: 3 AIAFVVALCVIAPSYARKENPIFELTDQDFDNFLKDKEVMLVDFYAPWCSDCDNLR 58
>SB_5372| Best HMM Match : ER_lumen_recept (HMM E-Value=2.5e-19)
Length = 229
Score = 37.5 bits (83), Expect = 0.010
Identities = 16/46 (34%), Positives = 29/46 (63%)
Frame = +3
Query: 312 KVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSSEYNGPRESNGIVK 449
+V+C + C+ +++ YPT+K+FRKG Y GP +++ +VK
Sbjct: 14 RVNCFDW-TDVCQDNNITVYPTIKLFRKGADELIYGGPLDADHLVK 58
>SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 711
Score = 36.3 bits (80), Expect = 0.023
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = +2
Query: 173 FSAVLSQHDTALVMFYAPWCGHCKR 247
F+ VL+ D +V FYAPWCG C R
Sbjct: 444 FTDVLASEDAWVVDFYAPWCGPCMR 468
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +2
Query: 119 IYLCKAAEEDVLDLTDSDF-SAVLSQHDTALVMFYAPWCGHCKRL 250
++ ++ +V L DF S+V S V F+APWC C RL
Sbjct: 276 LFAKESVSSNVHALGPEDFPSSVTSPSRPFFVDFFAPWCPPCMRL 320
Score = 29.1 bits (62), Expect = 3.5
Identities = 16/82 (19%), Positives = 37/82 (45%)
Frame = +3
Query: 294 PSGGATKVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSSEYNGPRESNGIVKYMRAQVGP 473
P G T VDCT + C Q+++ YPT ++ + ++ G + I++++ +
Sbjct: 335 PVGFGT-VDCTVHSQ-LCHQYNIRSYPTTILYNNSQ-PHQFIGHHNALDIIEFVEVEYPE 391
Query: 474 SSKELLTVADFELLLLRMK*WL 539
+ + D + + + W+
Sbjct: 392 AFRSAAFTGDIRVPCAQQEDWV 413
>SB_55398| Best HMM Match : Thioredoxin (HMM E-Value=3.6e-21)
Length = 186
Score = 33.5 bits (73), Expect = 0.16
Identities = 11/32 (34%), Positives = 22/32 (68%)
Frame = +3
Query: 360 VSGYPTLKIFRKGELSSEYNGPRESNGIVKYM 455
++GYPTL +F+ G EY+G R+ + + +++
Sbjct: 146 INGYPTLMLFKDGVQKKEYSGNRDLDSLYRFI 177
Score = 31.1 bits (67), Expect = 0.87
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +3
Query: 312 KVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSSEYNGPRES 434
KVDCT + C + ++ YPT+K++ G++ Y G R +
Sbjct: 23 KVDCTSD-VNLCVKQNIRAYPTMKLYYDGDI-KRYTGRRNA 61
Score = 29.5 bits (63), Expect = 2.7
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +2
Query: 209 VMFYAPWCGHCKRL 250
V FYAPWC HC +L
Sbjct: 111 VKFYAPWCIHCIKL 124
>SB_25332| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 41
Score = 33.5 bits (73), Expect = 0.16
Identities = 11/32 (34%), Positives = 22/32 (68%)
Frame = +3
Query: 360 VSGYPTLKIFRKGELSSEYNGPRESNGIVKYM 455
++GYPTL +F+ G EY+G R+ + + +++
Sbjct: 1 INGYPTLMLFKDGVQKKEYSGNRDLDSLYRFI 32
>SB_49513| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-19)
Length = 975
Score = 33.1 bits (72), Expect = 0.22
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 161 TDSDFSAVLSQHDTALVMFYAPWCGHC 241
TDS V++ L++FY PWCG C
Sbjct: 524 TDSFDDIVINNDQDVLLVFYTPWCGMC 550
>SB_14273| Best HMM Match : DUF1000 (HMM E-Value=0)
Length = 308
Score = 32.3 bits (70), Expect = 0.38
Identities = 18/36 (50%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Frame = +2
Query: 149 VLDLTDSDFSAVLSQHDTALVM--FYAPWCGHCKRL 250
VL+L DS F+A L+ T LV+ F A WCG CK +
Sbjct: 11 VLEL-DSQFTAELTNAGTKLVVADFTASWCGPCKSI 45
>SB_38445| Best HMM Match : ERp29 (HMM E-Value=2.2e-19)
Length = 335
Score = 31.5 bits (68), Expect = 0.66
Identities = 14/60 (23%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +2
Query: 80 MFGSLKFVLLLGIIYLCKAAE-EDVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKQ 256
+F + F+L+ I+ + + +++ T+ + + + FYAPW HC+R+ Q
Sbjct: 4 LFITNTFLLISLTIFTSTSVHCKKIVEFTNENVDEYVDGSKFVFIFFYAPWDDHCQRILQ 63
>SB_218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 31.5 bits (68), Expect = 0.66
Identities = 12/31 (38%), Positives = 22/31 (70%), Gaps = 2/31 (6%)
Frame = +2
Query: 167 SDFSAVLSQHDTALVM--FYAPWCGHCKRLK 253
++F++V++ LV+ FYA WCG C+++K
Sbjct: 19 AEFNSVINNTKDKLVVIDFYAEWCGPCRQIK 49
>SB_2701| Best HMM Match : Thioredoxin (HMM E-Value=4.8e-05)
Length = 215
Score = 31.1 bits (67), Expect = 0.87
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Frame = +2
Query: 161 TDSDFSAVLSQHDT--ALVMFYAPWCGHCKRL 250
T +DF +LS A+V F+APW HC ++
Sbjct: 8 TVTDFDRILSSSSNVLAVVHFFAPWAPHCNQM 39
>SB_28181| Best HMM Match : RVP (HMM E-Value=0.00058)
Length = 664
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/29 (51%), Positives = 19/29 (65%), Gaps = 4/29 (13%)
Frame = +2
Query: 173 FSAVLSQ--HDTAL--VMFYAPWCGHCKR 247
F+ VLS H++ L V FYAPWCG +R
Sbjct: 441 FAKVLSSFLHNSPLNFVFFYAPWCGQSRR 469
>SB_44156| Best HMM Match : Extensin_2 (HMM E-Value=0.05)
Length = 1878
Score = 29.5 bits (63), Expect = 2.7
Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = -1
Query: 621 AKVTSSLNLSAVLR-NSPFRSDSFSKNPTTTTSSLEVK 511
AK TS++ L NSP + S S+ T+TT SLEVK
Sbjct: 1687 AKTTSTIRTELTLDVNSPKQEMSTSRPQTSTTLSLEVK 1724
>SB_14715| Best HMM Match : Baculo_PEP_C (HMM E-Value=0.0024)
Length = 2040
Score = 29.1 bits (62), Expect = 3.5
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -1
Query: 99 NFSDPNISNLAGAFQQNRTNYSAFQPNLTN 10
N PNI++ A Q N T+ + QPN+T+
Sbjct: 1696 NVKQPNITDAGNATQANVTSLNVTQPNITD 1725
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = -1
Query: 99 NFSDPNISNLAGAFQQNRTNYSAFQPNLTN 10
N + NI++ + A Q N TN++ QPN+T+
Sbjct: 1654 NVTHLNITDTSNATQANVTNHNVKQPNITD 1683
>SB_38688| Best HMM Match : TP901-1_ORF40 (HMM E-Value=1.7)
Length = 576
Score = 28.3 bits (60), Expect = 6.2
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = +2
Query: 149 VLDLTDSDFSAVLSQHDTALVMFYAPWCGHCK 244
+ D+ D+ S SQ ++++ +AP C CK
Sbjct: 344 IRDVNDTQLSGTTSQDQYSVLLVHAPCCNACK 375
>SB_35625| Best HMM Match : DUF296 (HMM E-Value=0.0053)
Length = 885
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/47 (25%), Positives = 28/47 (59%)
Frame = -1
Query: 657 PVFSRTSLAEE*AKVTSSLNLSAVLRNSPFRSDSFSKNPTTTTSSLE 517
P + + + E + VTSS+ S +++ +D+F + P +++S++E
Sbjct: 370 PSVTPSLTSSESSAVTSSMTSSVIMKQDSSLADAFDRAPMSSSSAVE 416
>SB_2957| Best HMM Match : zf-HYPF (HMM E-Value=3.1)
Length = 150
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = +3
Query: 297 SGGATKVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSSEYNGP 425
SG +TK +G S++ T K + K E + EY GP
Sbjct: 47 SGNSTKTPPPQGQNDDDAPISLASGSTQKDYTKDEFNDEYKGP 89
>SB_51588| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 231
Score = 27.9 bits (59), Expect = 8.1
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +3
Query: 63 HRLNSKCSDH*SLFFYWA*FIYVKRPRRMFSILQIPTFR 179
HR +SKC+ H + FF W+ I+ P + I + F+
Sbjct: 179 HRTHSKCNQHANSFFPWSINIWNNLPGSITDIKEKGKFK 217
>SB_44457| Best HMM Match : Thioredoxin (HMM E-Value=2.2e-07)
Length = 438
Score = 27.9 bits (59), Expect = 8.1
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = +2
Query: 170 DFSAVLSQHDTALVMFYAPWCGHCKRL 250
+F L ++ A + F A WCG C+ +
Sbjct: 3 EFDKFLKDNEVAAIDFTATWCGPCRMI 29
>SB_4400| Best HMM Match : Borrelia_P13 (HMM E-Value=1.6)
Length = 250
Score = 27.9 bits (59), Expect = 8.1
Identities = 19/49 (38%), Positives = 20/49 (40%), Gaps = 1/49 (2%)
Frame = +1
Query: 334 ARVLVNNSLCPDILH*KSSEKENFLPNTMDQGSLMAL-SSTCVPKLDPA 477
A VL L PD H S +PNT G L L T VP PA
Sbjct: 32 APVLAKPLLLPDPSHTSISINVTAIPNTSGNGILAVLGGETLVPSYSPA 80
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,433,444
Number of Sequences: 59808
Number of extensions: 396698
Number of successful extensions: 1109
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 929
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1100
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1781448916
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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