Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30714
(687 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g21750.2 68414.m02723 protein disulfide isomerase, putative s... 64 8e-11
At1g21750.1 68414.m02722 protein disulfide isomerase, putative s... 64 8e-11
At1g77510.1 68414.m09026 protein disulfide isomerase, putative s... 62 4e-10
At1g35620.1 68414.m04425 thioredoxin family protein similar to S... 55 4e-08
At2g47470.2 68415.m05924 thioredoxin family protein similar to p... 53 2e-07
At2g47470.1 68415.m05925 thioredoxin family protein similar to p... 53 2e-07
At3g54960.1 68416.m06094 thioredoxin family protein similar to p... 50 1e-06
At5g60640.2 68418.m07611 thioredoxin family protein similar to p... 46 2e-05
At5g60640.1 68418.m07610 thioredoxin family protein similar to p... 46 2e-05
At2g32920.1 68415.m04036 thioredoxin family protein similar to S... 45 5e-05
At1g04980.1 68414.m00497 thioredoxin family protein similar to S... 45 5e-05
At3g20560.1 68416.m02603 thioredoxin family protein contains Pfa... 41 7e-04
At1g07960.3 68414.m00867 thioredoxin family protein low similari... 41 9e-04
At1g07960.2 68414.m00866 thioredoxin family protein low similari... 41 9e-04
At1g07960.1 68414.m00865 thioredoxin family protein low similari... 41 9e-04
At4g27080.1 68417.m03893 thioredoxin family protein contains Pfa... 40 0.002
At1g50950.1 68414.m05728 thioredoxin-related contains weak hit t... 38 0.006
At3g15360.1 68416.m01948 thioredoxin M-type 4, chloroplast (TRX-... 37 0.014
At4g03520.1 68417.m00480 thioredoxin M-type 2, chloroplast (TRX-... 34 0.077
At3g19780.1 68416.m02504 expressed protein 33 0.23
At1g03680.1 68414.m00347 thioredoxin M-type 1, chloroplast (TRX-... 32 0.31
At1g50320.1 68414.m05641 thioredoxin x nearly identical to thior... 31 0.54
At1g08430.1 68414.m00932 expressed protein contains Pfam profile... 31 0.72
At4g25880.2 68417.m03722 pumilio/Puf RNA-binding domain-containi... 30 1.7
At4g25880.1 68417.m03721 pumilio/Puf RNA-binding domain-containi... 30 1.7
At1g08440.1 68414.m00933 hypothetical protein contains Pfam prof... 29 2.2
At2g42070.1 68415.m05202 MutT/nudix family protein similar to SP... 29 2.9
At5g16400.1 68418.m01917 thioredoxin, putative similar to SP|P29... 28 5.0
At2g15570.1 68415.m01783 thioredoxin M-type 3, chloroplast (TRX-... 28 5.0
At1g52260.1 68414.m05897 thioredoxin family protein similar to p... 28 5.0
At1g43560.1 68414.m05000 thioredoxin family protein contains Pfa... 28 5.0
At1g76760.1 68414.m08933 thioredoxin family protein similar to t... 28 6.7
At1g62180.1 68414.m07014 5'-adenylylsulfate reductase 2, chlorop... 28 6.7
At4g37200.1 68417.m05266 thioredoxin family protein contains Pfa... 27 8.8
At3g16110.1 68416.m02035 thioredoxin family protein similar to p... 27 8.8
At2g01270.1 68415.m00040 thioredoxin family protein low similari... 27 8.8
>At1g21750.2 68414.m02723 protein disulfide isomerase, putative
similar to SP|P29828 Protein disulfide isomerase
precursor (PDI) (EC 5.3.4.1) {Medicago sativa}; isoform
contains non-consensus GA donor splice site at intron 9
Length = 487
Score = 64.1 bits (149), Expect = 8e-11
Identities = 30/66 (45%), Positives = 43/66 (65%), Gaps = 2/66 (3%)
Frame = +3
Query: 312 KVDCTEG-GKSTCEQFSVSGYPTLKIFRKG-ELSSEYNGPRESNGIVKYMRAQVGPSSKE 485
K+D +E + Q+ V G+PT+KIFR G + EYNGPRE+ GIV Y++ Q GP+S E
Sbjct: 87 KIDASEETNREFATQYEVQGFPTIKIFRNGGKAVQEYNGPREAEGIVTYLKKQSGPASAE 146
Query: 486 LLTVAD 503
+ + D
Sbjct: 147 IKSADD 152
Score = 50.0 bits (114), Expect = 1e-06
Identities = 19/37 (51%), Positives = 28/37 (75%)
Frame = +2
Query: 140 EEDVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRL 250
+E VL L ++F+ +++HD +V FYAPWCGHCK+L
Sbjct: 29 KEFVLTLDHTNFTDTINKHDFIVVEFYAPWCGHCKQL 65
Score = 39.1 bits (87), Expect = 0.003
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = +2
Query: 158 LTDSDFSAVLSQHDTALVMFYAPWCGHCKRL 250
++DS VL+ L+ FYAPWCGHC++L
Sbjct: 380 VSDSLDDIVLNSGKNVLLEFYAPWCGHCQKL 410
Score = 35.9 bits (79), Expect = 0.025
Identities = 20/46 (43%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Frame = +2
Query: 518 SKDEVVVVGFFEKESDLKGE-FLKTADKLREEVTFAHSSANEVLEK 652
S +VVVVG F K S + + F+ A+KLR E+ FAH+S ++L +
Sbjct: 158 SDKKVVVVGIFPKLSGSEFDSFMAIAEKLRSELDFAHTSDAKLLPR 203
>At1g21750.1 68414.m02722 protein disulfide isomerase, putative
similar to SP|P29828 Protein disulfide isomerase
precursor (PDI) (EC 5.3.4.1) {Medicago sativa}; isoform
contains non-consensus GA donor splice site at intron 9
Length = 501
Score = 64.1 bits (149), Expect = 8e-11
Identities = 30/66 (45%), Positives = 43/66 (65%), Gaps = 2/66 (3%)
Frame = +3
Query: 312 KVDCTEG-GKSTCEQFSVSGYPTLKIFRKG-ELSSEYNGPRESNGIVKYMRAQVGPSSKE 485
K+D +E + Q+ V G+PT+KIFR G + EYNGPRE+ GIV Y++ Q GP+S E
Sbjct: 87 KIDASEETNREFATQYEVQGFPTIKIFRNGGKAVQEYNGPREAEGIVTYLKKQSGPASAE 146
Query: 486 LLTVAD 503
+ + D
Sbjct: 147 IKSADD 152
Score = 50.0 bits (114), Expect = 1e-06
Identities = 19/37 (51%), Positives = 28/37 (75%)
Frame = +2
Query: 140 EEDVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRL 250
+E VL L ++F+ +++HD +V FYAPWCGHCK+L
Sbjct: 29 KEFVLTLDHTNFTDTINKHDFIVVEFYAPWCGHCKQL 65
Score = 39.1 bits (87), Expect = 0.003
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = +2
Query: 158 LTDSDFSAVLSQHDTALVMFYAPWCGHCKRL 250
++DS VL+ L+ FYAPWCGHC++L
Sbjct: 380 VSDSLDDIVLNSGKNVLLEFYAPWCGHCQKL 410
Score = 35.9 bits (79), Expect = 0.025
Identities = 20/46 (43%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Frame = +2
Query: 518 SKDEVVVVGFFEKESDLKGE-FLKTADKLREEVTFAHSSANEVLEK 652
S +VVVVG F K S + + F+ A+KLR E+ FAH+S ++L +
Sbjct: 158 SDKKVVVVGIFPKLSGSEFDSFMAIAEKLRSELDFAHTSDAKLLPR 203
>At1g77510.1 68414.m09026 protein disulfide isomerase, putative
similar to protein disulfide isomerase precursor
GB:P29828 GI:4704766 [Medicago sativa]; Pfam HMM hit:
PF00085 Thioredoxins
Length = 508
Score = 61.7 bits (143), Expect = 4e-10
Identities = 29/67 (43%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Frame = +3
Query: 294 PSGGATKVDCTE-GGKSTCEQFSVSGYPTLKIFRKGELS-SEYNGPRESNGIVKYMRAQV 467
P K+D +E K ++ + G+PTLKI R G S +YNGPRE+ GIV Y++ Q
Sbjct: 80 PPLALAKIDASEEANKEFANEYKIQGFPTLKILRNGGKSVQDYNGPREAEGIVTYLKKQS 139
Query: 468 GPSSKEL 488
GP+S E+
Sbjct: 140 GPASVEI 146
Score = 54.8 bits (126), Expect = 5e-08
Identities = 26/62 (41%), Positives = 37/62 (59%), Gaps = 3/62 (4%)
Frame = +2
Query: 74 FEMFGSLKFVLLLGIIYLCKAAEED---VLDLTDSDFSAVLSQHDTALVMFYAPWCGHCK 244
F+ F +LLL + +EE VL L S+F+ +S+HD +V FYAPWCGHC+
Sbjct: 3 FKGFACFSILLLLSLFVSSIRSEETKEFVLTLDHSNFTETISKHDFIVVEFYAPWCGHCQ 62
Query: 245 RL 250
+L
Sbjct: 63 KL 64
Score = 36.3 bits (80), Expect = 0.019
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +2
Query: 182 VLSQHDTALVMFYAPWCGHCKRL 250
V L+ FYAPWCGHC++L
Sbjct: 386 VFKSGKNVLIEFYAPWCGHCQKL 408
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +2
Query: 530 VVVVGFFEKES-DLKGEFLKTADKLREEVTFAHS 628
VV VG F K S D F+ A+KLR + FAH+
Sbjct: 161 VVAVGVFPKLSGDEFDSFMALAEKLRADYDFAHT 194
>At1g35620.1 68414.m04425 thioredoxin family protein similar to
SP|Q43116 Protein disulfide isomerase precursor (PDI)
(EC 5.3.4.1) {Ricinus communis}; contains Pfam profile
PF00085: Thioredoxin
Length = 440
Score = 55.2 bits (127), Expect = 4e-08
Identities = 22/34 (64%), Positives = 26/34 (76%)
Frame = +2
Query: 149 VLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRL 250
VL+LTDS+F + +S D V FYAPWCGHCKRL
Sbjct: 34 VLELTDSNFDSAISTFDCIFVDFYAPWCGHCKRL 67
Score = 33.5 bits (73), Expect = 0.13
Identities = 13/41 (31%), Positives = 26/41 (63%)
Frame = +3
Query: 351 QFSVSGYPTLKIFRKGELSSEYNGPRESNGIVKYMRAQVGP 473
+ + +PTL ++ G + EY GPR+++ +V+Y++ V P
Sbjct: 101 KIEIDAFPTLMLYNHG-VPMEYYGPRKADLLVRYLKKFVAP 140
>At2g47470.2 68415.m05924 thioredoxin family protein similar to
protein disulfide isomerase [Dictyostelium discoideum]
GI:2627440; contains Pfam profile: PF00085 Thioredoxin
Length = 266
Score = 53.2 bits (122), Expect = 2e-07
Identities = 24/51 (47%), Positives = 30/51 (58%)
Frame = +2
Query: 98 FVLLLGIIYLCKAAEEDVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRL 250
F L + L A +DV+ LTD F + + ALV FYAPWCGHCK+L
Sbjct: 8 FGFALLALLLVSAVADDVVVLTDDSFEKEVGKDKGALVEFYAPWCGHCKKL 58
Score = 53.2 bits (122), Expect = 2e-07
Identities = 25/58 (43%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Frame = +3
Query: 312 KVDCTEGGKSTCEQFSVSGYPTLKIFRKGELS-SEYNGPRESNGIVKYMRAQVGPSSK 482
KVDC E KS C ++ VSGYPT++ F KG L +Y GPR + + +Y+ + G + K
Sbjct: 79 KVDCDEQ-KSVCTKYGVSGYPTIQWFPKGSLEPQKYEGPRNAEALAEYVNKEGGTNVK 135
Score = 46.0 bits (104), Expect = 2e-05
Identities = 21/40 (52%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Frame = +2
Query: 134 AAEEDVLDLTDSDFSA-VLSQHDTALVMFYAPWCGHCKRL 250
A ++V+ LT +F VL Q+ LV FYAPWCGHCK L
Sbjct: 138 AVPQNVVVLTPDNFDEIVLDQNKDVLVEFYAPWCGHCKSL 177
Score = 36.7 bits (81), Expect = 0.014
Identities = 21/56 (37%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Frame = +3
Query: 336 KSTCEQFSVSGYPTLKIFRK-GELSSEYNGPRESNGIVKYMRAQVGPS--SKELLT 494
K+ E++ VSG+PTLK F K + +Y+G R+ + V ++ + G S SK LT
Sbjct: 205 KALGEKYGVSGFPTLKFFPKDNKAGHDYDGGRDLDDFVSFINEKSGTSRDSKGQLT 260
>At2g47470.1 68415.m05925 thioredoxin family protein similar to
protein disulfide isomerase [Dictyostelium discoideum]
GI:2627440; contains Pfam profile: PF00085 Thioredoxin
Length = 361
Score = 53.2 bits (122), Expect = 2e-07
Identities = 24/51 (47%), Positives = 30/51 (58%)
Frame = +2
Query: 98 FVLLLGIIYLCKAAEEDVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRL 250
F L + L A +DV+ LTD F + + ALV FYAPWCGHCK+L
Sbjct: 8 FGFALLALLLVSAVADDVVVLTDDSFEKEVGKDKGALVEFYAPWCGHCKKL 58
Score = 53.2 bits (122), Expect = 2e-07
Identities = 25/58 (43%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Frame = +3
Query: 312 KVDCTEGGKSTCEQFSVSGYPTLKIFRKGELS-SEYNGPRESNGIVKYMRAQVGPSSK 482
KVDC E KS C ++ VSGYPT++ F KG L +Y GPR + + +Y+ + G + K
Sbjct: 79 KVDCDEQ-KSVCTKYGVSGYPTIQWFPKGSLEPQKYEGPRNAEALAEYVNKEGGTNVK 135
Score = 46.0 bits (104), Expect = 2e-05
Identities = 21/40 (52%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Frame = +2
Query: 134 AAEEDVLDLTDSDFSA-VLSQHDTALVMFYAPWCGHCKRL 250
A ++V+ LT +F VL Q+ LV FYAPWCGHCK L
Sbjct: 138 AVPQNVVVLTPDNFDEIVLDQNKDVLVEFYAPWCGHCKSL 177
Score = 36.7 bits (81), Expect = 0.014
Identities = 21/56 (37%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Frame = +3
Query: 336 KSTCEQFSVSGYPTLKIFRK-GELSSEYNGPRESNGIVKYMRAQVGPS--SKELLT 494
K+ E++ VSG+PTLK F K + +Y+G R+ + V ++ + G S SK LT
Sbjct: 205 KALGEKYGVSGFPTLKFFPKDNKAGHDYDGGRDLDDFVSFINEKSGTSRDSKGQLT 260
>At3g54960.1 68416.m06094 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 579
Score = 50.0 bits (114), Expect = 1e-06
Identities = 22/69 (31%), Positives = 39/69 (56%)
Frame = +3
Query: 312 KVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSSEYNGPRESNGIVKYMRAQVGPSSKELL 491
K+D TE G +++ + G+PT+ +F GE+ Y G R +GIV +++ + PS +
Sbjct: 153 KIDATEEG-DLAQKYEIQGFPTVFLFVDGEMRKTYEGERTKDGIVTWLKKKASPSIHNIT 211
Query: 492 TVADFELLL 518
T + E +L
Sbjct: 212 TKEEAERVL 220
Score = 42.3 bits (95), Expect = 3e-04
Identities = 17/37 (45%), Positives = 24/37 (64%)
Frame = +2
Query: 140 EEDVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRL 250
E+DV LT +F+ + + A+V FYAPWCG C+ L
Sbjct: 98 EKDVAVLTKDNFTEFVGNNSFAMVEFYAPWCGACQAL 134
Score = 33.9 bits (74), Expect = 0.10
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +2
Query: 146 DVLDLTDSDFSA-VLSQHDTALVMFYAPWCGHCK 244
DV + ++F VL + L+ YAPWCGHC+
Sbjct: 438 DVKVIVGNNFDEIVLDESKDVLLEIYAPWCGHCQ 471
>At5g60640.2 68418.m07611 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 536
Score = 46.0 bits (104), Expect = 2e-05
Identities = 17/37 (45%), Positives = 26/37 (70%)
Frame = +2
Query: 140 EEDVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRL 250
E+DV+ + + +F+ V+ + LV FYAPWCGHC+ L
Sbjct: 102 EKDVVVIKERNFTDVIENNQYVLVEFYAPWCGHCQSL 138
Score = 44.4 bits (100), Expect = 7e-05
Identities = 24/69 (34%), Positives = 37/69 (53%)
Frame = +3
Query: 312 KVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSSEYNGPRESNGIVKYMRAQVGPSSKELL 491
K+D TE + +++ V G+PTL F GE Y G R IV +++ ++GP L
Sbjct: 158 KIDATEENE-LAQEYRVQGFPTLLFFVDGE-HKPYTGGRTKETIVTWVKKKIGPGVYNLT 215
Query: 492 TVADFELLL 518
T+ D E +L
Sbjct: 216 TLDDAEKVL 224
Score = 36.3 bits (80), Expect = 0.019
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +2
Query: 140 EEDVLDLTDSDFSA-VLSQHDTALVMFYAPWCGHCKRLK 253
+EDV + +F VL L+ YAPWCGHC+ L+
Sbjct: 440 DEDVKIVVGDNFDEIVLDDSKDVLLEVYAPWCGHCQALE 478
>At5g60640.1 68418.m07610 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 597
Score = 46.0 bits (104), Expect = 2e-05
Identities = 17/37 (45%), Positives = 26/37 (70%)
Frame = +2
Query: 140 EEDVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRL 250
E+DV+ + + +F+ V+ + LV FYAPWCGHC+ L
Sbjct: 102 EKDVVVIKERNFTDVIENNQYVLVEFYAPWCGHCQSL 138
Score = 44.4 bits (100), Expect = 7e-05
Identities = 24/69 (34%), Positives = 37/69 (53%)
Frame = +3
Query: 312 KVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSSEYNGPRESNGIVKYMRAQVGPSSKELL 491
K+D TE + +++ V G+PTL F GE Y G R IV +++ ++GP L
Sbjct: 158 KIDATEENE-LAQEYRVQGFPTLLFFVDGE-HKPYTGGRTKETIVTWVKKKIGPGVYNLT 215
Query: 492 TVADFELLL 518
T+ D E +L
Sbjct: 216 TLDDAEKVL 224
Score = 36.3 bits (80), Expect = 0.019
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +2
Query: 140 EEDVLDLTDSDFSA-VLSQHDTALVMFYAPWCGHCKRLK 253
+EDV + +F VL L+ YAPWCGHC+ L+
Sbjct: 440 DEDVKIVVGDNFDEIVLDDSKDVLLEVYAPWCGHCQALE 478
>At2g32920.1 68415.m04036 thioredoxin family protein similar to
SP|Q15084 Protein disulfide isomerase A6 precursor (EC
5.3.4.1) {Homo sapiens}; contains Pfam profile PF00085:
Thioredoxin
Length = 440
Score = 44.8 bits (101), Expect = 5e-05
Identities = 20/35 (57%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Frame = +2
Query: 149 VLDLTDSDF-SAVLSQHDTALVMFYAPWCGHCKRL 250
V+ LT S+F S VL+ + LV F+APWCGHCK L
Sbjct: 32 VVQLTASNFKSKVLNSNGVVLVEFFAPWCGHCKAL 66
Score = 39.1 bits (87), Expect = 0.003
Identities = 15/34 (44%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Frame = +2
Query: 152 LDLTDSDFS-AVLSQHDTALVMFYAPWCGHCKRL 250
++L S+F V+ ++ +V F+APWCGHCK+L
Sbjct: 165 VELNASNFDDLVIESNELWIVEFFAPWCGHCKKL 198
Score = 37.1 bits (82), Expect = 0.011
Identities = 12/44 (27%), Positives = 25/44 (56%)
Frame = +3
Query: 336 KSTCEQFSVSGYPTLKIFRKGELSSEYNGPRESNGIVKYMRAQV 467
+S + + + G+PT+K+F G+ +Y G R++ I + Q+
Sbjct: 92 QSAAQDYGIKGFPTIKVFVPGKAPIDYQGARDAKSIANFAYKQI 135
>At1g04980.1 68414.m00497 thioredoxin family protein similar to
SP|Q63081 Protein disulfide isomerase A6 precursor (EC
5.3.4.1) {Rattus norvegicus}; contains Pfam profile
PF00085: Thioredoxin
Length = 443
Score = 44.8 bits (101), Expect = 5e-05
Identities = 20/35 (57%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Frame = +2
Query: 149 VLDLTDSDF-SAVLSQHDTALVMFYAPWCGHCKRL 250
VL LT S+F S VL+ + LV F+APWCGHC+ L
Sbjct: 30 VLQLTPSNFKSKVLNSNGVVLVEFFAPWCGHCQSL 64
Score = 38.7 bits (86), Expect = 0.004
Identities = 14/34 (41%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Frame = +2
Query: 152 LDLTDSDFSAVLSQH-DTALVMFYAPWCGHCKRL 250
++L S+F ++++ + +V F+APWCGHCK+L
Sbjct: 166 VELNSSNFDELVTESKELWIVEFFAPWCGHCKKL 199
Score = 37.5 bits (83), Expect = 0.008
Identities = 16/52 (30%), Positives = 29/52 (55%)
Frame = +3
Query: 336 KSTCEQFSVSGYPTLKIFRKGELSSEYNGPRESNGIVKYMRAQVGPSSKELL 491
KS + + V G+PT+K+F G+ +Y G R++ I ++ Q+ K+ L
Sbjct: 90 KSVSQDYGVRGFPTIKVFVPGKPPIDYQGARDAKSISQFAIKQIKALLKDRL 141
>At3g20560.1 68416.m02603 thioredoxin family protein contains Pfam
profile PF00085: Thioredoxin
Length = 483
Score = 41.1 bits (92), Expect = 7e-04
Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 9/71 (12%)
Frame = +3
Query: 315 VDCTEGGKSTCEQFSVSGYPTLKIFRKGELSSE---------YNGPRESNGIVKYMRAQV 467
VDCTE + C++ + GYP+++IFRKG E Y G R+++ IVK + V
Sbjct: 204 VDCTEE-PALCKRNHIQGYPSIRIFRKGSDLREDHGHHEHESYYGDRDTDSIVKMVEGLV 262
Query: 468 GPSSKELLTVA 500
P E VA
Sbjct: 263 APIHPETHKVA 273
Score = 30.7 bits (66), Expect = 0.95
Identities = 18/40 (45%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +2
Query: 143 EDVLDLTDSDFSAVLSQHDTALVM-FYAPWCGHCKRLKQS 259
+ + LT + F A LS H LV+ F APWC RLK S
Sbjct: 141 DGAIPLTSASFEA-LSHHFPILVVNFNAPWCYWSNRLKPS 179
>At1g07960.3 68414.m00867 thioredoxin family protein low similarity
to protein disulfide isomerase 4 [Giardia intestinalis]
GI:13489047; contains Pfam profile PF00085: Thioredoxin
Length = 146
Score = 40.7 bits (91), Expect = 9e-04
Identities = 25/52 (48%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Frame = +2
Query: 101 VLLLGI-IYLCKAAEEDVLDLTDSDFSAVLSQHDTA-LVMFYAPWCGHCKRL 250
+LLL I I L KA +V+ LT FS + + DTA V F PWC HCK+L
Sbjct: 13 ILLLFIPIELVKA---EVITLTPETFSDKIKEKDTAWFVKFCVPWCKHCKKL 61
Score = 33.9 bits (74), Expect = 0.10
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = +3
Query: 312 KVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSSEYNGPRESNGIVKYM 455
+VDC ++ C + + YPT +F GE S+Y G R+ + ++
Sbjct: 82 EVDCGTS-RAVCTKVEIHSYPTFMLFYNGEEVSKYKGKRDVESLKAFV 128
>At1g07960.2 68414.m00866 thioredoxin family protein low similarity
to protein disulfide isomerase 4 [Giardia intestinalis]
GI:13489047; contains Pfam profile PF00085: Thioredoxin
Length = 146
Score = 40.7 bits (91), Expect = 9e-04
Identities = 25/52 (48%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Frame = +2
Query: 101 VLLLGI-IYLCKAAEEDVLDLTDSDFSAVLSQHDTA-LVMFYAPWCGHCKRL 250
+LLL I I L KA +V+ LT FS + + DTA V F PWC HCK+L
Sbjct: 13 ILLLFIPIELVKA---EVITLTPETFSDKIKEKDTAWFVKFCVPWCKHCKKL 61
Score = 33.9 bits (74), Expect = 0.10
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = +3
Query: 312 KVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSSEYNGPRESNGIVKYM 455
+VDC ++ C + + YPT +F GE S+Y G R+ + ++
Sbjct: 82 EVDCGTS-RAVCTKVEIHSYPTFMLFYNGEEVSKYKGKRDVESLKAFV 128
>At1g07960.1 68414.m00865 thioredoxin family protein low similarity
to protein disulfide isomerase 4 [Giardia intestinalis]
GI:13489047; contains Pfam profile PF00085: Thioredoxin
Length = 146
Score = 40.7 bits (91), Expect = 9e-04
Identities = 25/52 (48%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Frame = +2
Query: 101 VLLLGI-IYLCKAAEEDVLDLTDSDFSAVLSQHDTA-LVMFYAPWCGHCKRL 250
+LLL I I L KA +V+ LT FS + + DTA V F PWC HCK+L
Sbjct: 13 ILLLFIPIELVKA---EVITLTPETFSDKIKEKDTAWFVKFCVPWCKHCKKL 61
Score = 33.9 bits (74), Expect = 0.10
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = +3
Query: 312 KVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSSEYNGPRESNGIVKYM 455
+VDC ++ C + + YPT +F GE S+Y G R+ + ++
Sbjct: 82 EVDCGTS-RAVCTKVEIHSYPTFMLFYNGEEVSKYKGKRDVESLKAFV 128
>At4g27080.1 68417.m03893 thioredoxin family protein contains Pfam
PF00085: Thioredoxin
Length = 480
Score = 39.9 bits (89), Expect = 0.002
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 9/63 (14%)
Frame = +3
Query: 312 KVDCTEGGKSTCEQFSVSGYPTLKIFRKG-ELSSE--------YNGPRESNGIVKYMRAQ 464
KVDCT+ G C + + GYP+++IFRKG +L + Y G R++ +VK + +
Sbjct: 203 KVDCTQEG-DLCRRNHIQGYPSIRIFRKGSDLKDDNAHHDHESYYGDRDTESLVKMVVSL 261
Query: 465 VGP 473
V P
Sbjct: 262 VEP 264
Score = 37.1 bits (82), Expect = 0.011
Identities = 17/39 (43%), Positives = 20/39 (51%)
Frame = +2
Query: 143 EDVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKQS 259
ED + LT +F Q +V FYAPWC C LK S
Sbjct: 141 EDSVPLTGRNFDTFTHQFPILVVNFYAPWCYWCNLLKPS 179
>At1g50950.1 68414.m05728 thioredoxin-related contains weak hit to
Pfam PF00085: Thioredoxin; contains 2 predicted
transmembrane domains
Length = 484
Score = 37.9 bits (84), Expect = 0.006
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 9/66 (13%)
Frame = +3
Query: 315 VDCTEGGKSTCEQFSVSGYPTLKIFRKGELSSE---------YNGPRESNGIVKYMRAQV 467
VDCTE + C+ + GYP+++IFR+G E Y G R+++ +VK + +
Sbjct: 205 VDCTEE-PTLCKSNHIQGYPSIRIFRRGSGLREDHGNHEHESYYGDRDTDSLVKMVEELL 263
Query: 468 GPSSKE 485
P KE
Sbjct: 264 KPIKKE 269
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = +2
Query: 152 LDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKQS 259
+ LT + F +V FYAPWC RLK S
Sbjct: 145 IPLTGAAFEKFTHHFQILVVNFYAPWCYWSNRLKPS 180
>At3g15360.1 68416.m01948 thioredoxin M-type 4, chloroplast (TRX-M4)
nearly identical to SP|Q9SEU6 Thioredoxin M-type 4,
chloroplast precursor (TRX-M4) {Arabidopsis thaliana}
Length = 193
Score = 36.7 bits (81), Expect = 0.014
Identities = 16/40 (40%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Frame = +2
Query: 134 AAEEDVLDLTDSDFSAVLSQHDT-ALVMFYAPWCGHCKRL 250
AA +V +L+DS++ + + D LV F+APWCG C+ +
Sbjct: 83 AAAVEVPNLSDSEWQTKVLESDVPVLVEFWAPWCGPCRMI 122
>At4g03520.1 68417.m00480 thioredoxin M-type 2, chloroplast (TRX-M2)
nearly identical to SP|Q9SEU8 Thioredoxin M-type 2,
chloroplast precursor (TRX-M2) {Arabidopsis thaliana}
Length = 186
Score = 34.3 bits (75), Expect = 0.077
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
Frame = +2
Query: 125 LCKAAEE--DVLDLTDSDF-SAVLSQHDTALVMFYAPWCGHCKRL 250
+C+A E D+ + DS + S VL +V F+APWCG CK +
Sbjct: 72 VCEAQETTTDIQVVNDSTWDSLVLKATGPVVVDFWAPWCGPCKMI 116
>At3g19780.1 68416.m02504 expressed protein
Length = 1014
Score = 32.7 bits (71), Expect = 0.23
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = +2
Query: 92 LKFVLLLGIIYLCKAAEEDVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRLK 253
L F++ + II L + + LT+ +FS+ + H L+ PWCG + LK
Sbjct: 9 LPFLVFVSII-LPSSCHGEWEILTEQNFSSQIRLHPHVLLFVTTPWCGESRSLK 61
>At1g03680.1 68414.m00347 thioredoxin M-type 1, chloroplast (TRX-M1)
nearly identical to SP|O48737 Thioredoxin M-type 1,
chloroplast precursor (TRX-M1) {Arabidopsis thaliana};
similar to ESTs gb|T13714, gb|H76398, gb|N37762,
gb|AA042639, gb|T21104, emb|Z30901
Length = 179
Score = 32.3 bits (70), Expect = 0.31
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +2
Query: 113 GIIYLCKAAEEDVLDLTDSDF-SAVLSQHDTALVMFYAPWCGHCKRL 250
G+I + + + DS + S VL + V F+APWCG CK +
Sbjct: 64 GVICEAQDTATGIPVVNDSTWDSLVLKADEPVFVDFWAPWCGPCKMI 110
>At1g50320.1 68414.m05641 thioredoxin x nearly identical to
thioredoxin x GB:AAF15952 GI:6539616 from [Arabidopsis
thaliana]
Length = 182
Score = 31.5 bits (68), Expect = 0.54
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +2
Query: 149 VLDLTDSDFSA-VLSQHDTALVMFYAPWCGHCK 244
+ ++ +S+FS+ VL LV F A WCG CK
Sbjct: 71 IKEIGESEFSSTVLESAQPVLVEFVATWCGPCK 103
>At1g08430.1 68414.m00932 expressed protein contains Pfam profile
PF01027: Uncharacterized protein family UPF0005
Length = 493
Score = 31.1 bits (67), Expect = 0.72
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Frame = +2
Query: 44 VRFC*KAPAKFEMFGSLKFVLLLGIIYLCKAAEEDVLDLTDSDFSAVLSQHDTALV--MF 217
VRF KF+ +G L F+L +I L +E+++DL +S S V+ + ++ +F
Sbjct: 124 VRFFPWVKTKFD-YGILIFILTFALISLSGFRDEEIMDLAESRLSTVVIGGVSCILISIF 182
Query: 218 YAP-WCG 235
P W G
Sbjct: 183 VCPVWAG 189
>At4g25880.2 68417.m03722 pumilio/Puf RNA-binding domain-containing
protein contains Pfam profile:PF00806 Pumilio-family RNA
binding domains
Length = 852
Score = 29.9 bits (64), Expect = 1.7
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
Frame = -2
Query: 473 GSNLGTHVLDNAIRLPWSIVFGRKFSFSEDFQ--CRISGHRE--LFTSTLATFRTVYFSS 306
GSN+G+H +++A+ +G+ + FS D Q + SG L+T+T +T Y +S
Sbjct: 270 GSNMGSHGVNDAVIGAGQFHYGQPYKFSGDGQPVLQSSGFTPPLLYTAT----QTAYMTS 325
Query: 305 ATGGSSVFNRPAATAYSALVSYNDRT 228
+ V+N + YS Y T
Sbjct: 326 P---AHVYNMQSPAVYSPQYGYGPYT 348
>At4g25880.1 68417.m03721 pumilio/Puf RNA-binding domain-containing
protein contains Pfam profile:PF00806 Pumilio-family RNA
binding domains
Length = 861
Score = 29.9 bits (64), Expect = 1.7
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
Frame = -2
Query: 473 GSNLGTHVLDNAIRLPWSIVFGRKFSFSEDFQ--CRISGHRE--LFTSTLATFRTVYFSS 306
GSN+G+H +++A+ +G+ + FS D Q + SG L+T+T +T Y +S
Sbjct: 270 GSNMGSHGVNDAVIGAGQFHYGQPYKFSGDGQPVLQSSGFTPPLLYTAT----QTAYMTS 325
Query: 305 ATGGSSVFNRPAATAYSALVSYNDRT 228
+ V+N + YS Y T
Sbjct: 326 P---AHVYNMQSPAVYSPQYGYGPYT 348
>At1g08440.1 68414.m00933 hypothetical protein contains Pfam profile
PF01027: Uncharacterized protein family UPF0005
Length = 501
Score = 29.5 bits (63), Expect = 2.2
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Frame = +2
Query: 44 VRFC*KAPAKFEMFGSLKFVLLLGIIYLCKAAEEDVLDLTDSDFSAVLSQHDTALV--MF 217
VRF + A+++ +G L F+L +I + E+++LDL S V+ + ++ +F
Sbjct: 121 VRFFPRVKARYD-YGVLIFILTFALISVSGFREDEILDLAHKRLSTVIMGGVSCVLISIF 179
Query: 218 YAP-WCG 235
P W G
Sbjct: 180 VCPVWAG 186
>At2g42070.1 68415.m05202 MutT/nudix family protein similar to
SP|Q58549 ADP-ribose pyrophosphatase (EC 3.6.1.13)
{Methanococcus jannaschii}; contains Pfam profile
PF00293: NUDIX domain
Length = 280
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/32 (53%), Positives = 22/32 (68%)
Frame = -1
Query: 615 VTSSLNLSAVLRNSPFRSDSFSKNPTTTTSSL 520
++SSLNLS+V +SP R FS PT +SSL
Sbjct: 32 ISSSLNLSSVTSSSPRR--IFSFKPTRMSSSL 61
>At5g16400.1 68418.m01917 thioredoxin, putative similar to SP|P29450
Thioredoxin F-type, chloroplast precursor (TRX-F) {Pisum
sativum}; contains Pfam profile: PF00085 Thioredoxin
Length = 185
Score = 28.3 bits (60), Expect = 5.0
Identities = 12/53 (22%), Positives = 24/53 (45%)
Frame = +3
Query: 312 KVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSSEYNGPRESNGIVKYMRAQVG 470
K+DC + K ++ + PT KI + ++ E G + + + A+ G
Sbjct: 133 KLDCNQDNKPLAKELGIRVVPTFKILKDNKVVKEVTGAKYEDLLAAIEAARSG 185
>At2g15570.1 68415.m01783 thioredoxin M-type 3, chloroplast (TRX-M3)
identical to SP|Q9SEU7 Thioredoxin M-type 3, chloroplast
precursor (TRX-M3) {Arabidopsis thaliana}
Length = 173
Score = 28.3 bits (60), Expect = 5.0
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +2
Query: 179 AVLSQHDTALVMFYAPWCGHCK 244
+VL LV FY WCG C+
Sbjct: 79 SVLKSETPVLVEFYTSWCGPCR 100
>At1g52260.1 68414.m05897 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 537
Score = 28.3 bits (60), Expect = 5.0
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +2
Query: 137 AEEDVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRL 250
A+ VL+L V+ ++ +V+ YAPWC L
Sbjct: 75 AQRIVLELNGDYTKRVIDGNEFVMVLGYAPWCARSAEL 112
>At1g43560.1 68414.m05000 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin; similar to thioredoxin
GI:142153 from [Synechococcus PCC6301]
Length = 167
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = +2
Query: 161 TDSDFSAVLSQHDT-ALVMFYAPWCGHCK 244
T + F +L D LV FYA WCG C+
Sbjct: 64 TFNSFDDLLQNSDKPVLVDFYATWCGPCQ 92
>At1g76760.1 68414.m08933 thioredoxin family protein similar to
thioredoxin CH2, M-type, chloroplast precursor GB:P23400
SP|P23400 [Chlamydomonas reinhardtii]; contains Pfam
profile: PF00085 Thioredoxin
Length = 172
Score = 27.9 bits (59), Expect = 6.7
Identities = 17/60 (28%), Positives = 23/60 (38%)
Frame = +2
Query: 65 PAKFEMFGSLKFVLLLGIIYLCKAAEEDVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCK 244
P + G LKF L E DS +++ LV +YA WCG C+
Sbjct: 38 PVRRVRTGDLKFPSLSSTTRCTPRRIEAKKQTFDSFEDLLVNSDKPVLVDYYATWCGPCQ 97
>At1g62180.1 68414.m07014 5'-adenylylsulfate reductase 2,
chloroplast (APR2) (APSR) / adenosine 5'-phosphosulfate
5'-adenylylsulfate (APS) sulfotransferase 2 /
3'-phosphoadenosine-5'-phosphosulfate (PAPS) reductase
homolog 43 (PRH-43) identical to SP|P92981
5'-adenylylsulfate reductase 2, chloroplast precursor
(EC 1.8.4.9) (Adenosine 5'-phosphosulfate
5'-adenylylsulfate sulfotransferase 2) (APS
sulfotransferase 2) (Thioredoxin independent APS
reductase 2) (3'-phosphoadenosine-5'-phosphosulfate
reductase homolog 43) (PAPS reductase homolog 43)
(Prh-43) {Arabidopsis thaliana}; identical to cDNA PAPS
reductase homolog (PRH43) GI:1710115
Length = 454
Score = 27.9 bits (59), Expect = 6.7
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +2
Query: 206 LVMFYAPWCGHCKRLKQS 259
LV+ YAPWC C+ ++ S
Sbjct: 366 LVVLYAPWCPFCQAMEAS 383
>At4g37200.1 68417.m05266 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin; identical to cDNA
thioredoxin-like protein (hcf164 gene) GI;12049652
Length = 261
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Frame = +2
Query: 155 DLTDS--DFSAVLSQHDTALVMFYAPWCGHCKRL 250
DLT S + LS +V FYA WC C+ L
Sbjct: 123 DLTASALPYEEALSNGKPTVVEFYADWCEVCREL 156
>At3g16110.1 68416.m02035 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 534
Score = 27.5 bits (58), Expect = 8.8
Identities = 10/38 (26%), Positives = 20/38 (52%)
Frame = +2
Query: 137 AEEDVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRL 250
A+ V++L + ++ ++ +V+ YAPWC L
Sbjct: 73 AQRIVVELNGDNTKRLIDGNEYVMVLGYAPWCARSAEL 110
>At2g01270.1 68415.m00040 thioredoxin family protein low similarity
to quiescin [Homo sapiens] GI:13257405; contains Pfam
profiles PF00085: Thioredoxin, PF04777: Erv1 / Alr
family
Length = 495
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/40 (30%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = +2
Query: 140 EEDVLDLTDSDFSAVLSQHDT--ALVMFYAPWCGHCKRLK 253
++ ++L ++F +VL A+V F+A WC C+ K
Sbjct: 34 KDKAVELNTTNFDSVLKDTPAKYAVVEFFAHWCPACRNYK 73
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,528,675
Number of Sequences: 28952
Number of extensions: 289552
Number of successful extensions: 845
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 782
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 840
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1457719448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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