Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30712
         (551 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    26   0.19 
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    24   1.0  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    22   4.1  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    22   4.1  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    21   5.4  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   7.2  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 26.2 bits (55), Expect = 0.19
 Identities = 20/56 (35%), Positives = 25/56 (44%)
 Frame = +2

Query: 200 MAAYVGFSKISQGGQFNHGSGVAVLYTNHLEEAS*ELAQTQFQYHQSAGISRTVTQ 367
           M A    + IS  GQF  G   A L  + +   S      Q+ +  SAG S TVTQ
Sbjct: 112 MEALQAGADISMIGQFGVGFYSAYLVADKVTVVSKNNDDEQYVWESSAGGSFTVTQ 167


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 23.8 bits (49), Expect = 1.0
 Identities = 14/37 (37%), Positives = 18/37 (48%)
 Frame = +1

Query: 424 PLTSSNLVKQAT*PRGNNASKCGSLANFLGLALSTTP 534
           P+     VKQ T P G   +   SL++ LG  LS  P
Sbjct: 59  PMNMQGFVKQQTAPHGPPYAPHPSLSSGLGGGLSGMP 95


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +2

Query: 479 PPNVEVWRTFLAWHF 523
           PPN E+   F  W+F
Sbjct: 408 PPNYEIRHKFKLWNF 422


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = +1

Query: 301 LGTGADTIPVPPVGRNQPDC 360
           +GT AD  PVPP   N P C
Sbjct: 687 VGTHADLPPVPP---NFPTC 703


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +2

Query: 458 LSQGVITPPNVEVWRTFLAWH 520
           LS G+I      +W+T +AW+
Sbjct: 71  LSVGLINVLTDIIWKTTVAWY 91


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 10/36 (27%), Positives = 16/36 (44%)
 Frame = -2

Query: 316 LRQFLRSFFQMVGVQDCYT*AVVKLATLGNFAKAHI 209
           L  +LR FF +  V  CY  + + L     F   ++
Sbjct: 522 LAHYLRVFFTVFNVVHCYLASELVLMLKNRFVTLNV 557


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,523
Number of Sequences: 336
Number of extensions: 3327
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13621010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)