Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30711
(510 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF506023-1|AAM46899.1| 76|Tribolium castaneum polyubiquitin pr... 154 5e-40
AF506022-1|AAM46898.1| 685|Tribolium castaneum polyubiquitin pr... 154 5e-40
AF506021-1|AAM46897.1| 64|Tribolium castaneum polyubiquitin pr... 130 7e-33
AF506020-1|AAM46896.1| 112|Tribolium castaneum polyubiquitin pr... 128 4e-32
AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor ... 25 0.52
EF592537-1|ABQ95983.1| 593|Tribolium castaneum beta-N-acetylglu... 24 0.91
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept... 23 2.1
DQ414246-1|ABD63008.1| 126|Tribolium castaneum odd-skipped prot... 21 6.4
DQ372925-1|ABD17350.1| 596|Tribolium castaneum telomerase rever... 21 6.4
>AF506023-1|AAM46899.1| 76|Tribolium castaneum polyubiquitin
protein.
Length = 76
Score = 154 bits (373), Expect = 5e-40
Identities = 75/76 (98%), Positives = 75/76 (98%)
Frame = +2
Query: 23 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 202
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 203 IQKESTLHLVLRLRGG 250
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
>AF506022-1|AAM46898.1| 685|Tribolium castaneum polyubiquitin
protein.
Length = 685
Score = 154 bits (373), Expect = 5e-40
Identities = 75/76 (98%), Positives = 75/76 (98%)
Frame = +2
Query: 23 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 202
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 203 IQKESTLHLVLRLRGG 250
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 154 bits (373), Expect = 5e-40
Identities = 75/76 (98%), Positives = 75/76 (98%)
Frame = +2
Query: 23 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 202
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 203 IQKESTLHLVLRLRGG 250
IQKESTLHLVLRLRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 154 bits (373), Expect = 5e-40
Identities = 75/76 (98%), Positives = 75/76 (98%)
Frame = +2
Query: 23 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 202
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 203 IQKESTLHLVLRLRGG 250
IQKESTLHLVLRLRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
Score = 154 bits (373), Expect = 5e-40
Identities = 75/76 (98%), Positives = 75/76 (98%)
Frame = +2
Query: 23 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 202
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 203 IQKESTLHLVLRLRGG 250
IQKESTLHLVLRLRGG
Sbjct: 289 IQKESTLHLVLRLRGG 304
Score = 154 bits (373), Expect = 5e-40
Identities = 75/76 (98%), Positives = 75/76 (98%)
Frame = +2
Query: 23 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 202
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 203 IQKESTLHLVLRLRGG 250
IQKESTLHLVLRLRGG
Sbjct: 365 IQKESTLHLVLRLRGG 380
Score = 154 bits (373), Expect = 5e-40
Identities = 75/76 (98%), Positives = 75/76 (98%)
Frame = +2
Query: 23 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 202
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 203 IQKESTLHLVLRLRGG 250
IQKESTLHLVLRLRGG
Sbjct: 517 IQKESTLHLVLRLRGG 532
Score = 154 bits (373), Expect = 5e-40
Identities = 75/76 (98%), Positives = 75/76 (98%)
Frame = +2
Query: 23 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 202
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 533 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 592
Query: 203 IQKESTLHLVLRLRGG 250
IQKESTLHLVLRLRGG
Sbjct: 593 IQKESTLHLVLRLRGG 608
Score = 154 bits (373), Expect = 5e-40
Identities = 75/76 (98%), Positives = 75/76 (98%)
Frame = +2
Query: 23 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 202
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 609 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 668
Query: 203 IQKESTLHLVLRLRGG 250
IQKESTLHLVLRLRGG
Sbjct: 669 IQKESTLHLVLRLRGG 684
Score = 151 bits (367), Expect = 3e-39
Identities = 74/76 (97%), Positives = 74/76 (97%)
Frame = +2
Query: 23 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 202
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQR IFAGKQLEDGRTLSDYN
Sbjct: 381 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRSIFAGKQLEDGRTLSDYN 440
Query: 203 IQKESTLHLVLRLRGG 250
IQKESTLHLVLRLRGG
Sbjct: 441 IQKESTLHLVLRLRGG 456
>AF506021-1|AAM46897.1| 64|Tribolium castaneum polyubiquitin
protein.
Length = 64
Score = 130 bits (314), Expect = 7e-33
Identities = 63/64 (98%), Positives = 63/64 (98%)
Frame = +2
Query: 23 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 202
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 203 IQKE 214
IQKE
Sbjct: 61 IQKE 64
>AF506020-1|AAM46896.1| 112|Tribolium castaneum polyubiquitin
protein.
Length = 112
Score = 128 bits (308), Expect = 4e-32
Identities = 62/64 (96%), Positives = 62/64 (96%)
Frame = +2
Query: 23 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 202
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQR IFAGKQLEDGRTLSDYN
Sbjct: 49 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRSIFAGKQLEDGRTLSDYN 108
Query: 203 IQKE 214
IQKE
Sbjct: 109 IQKE 112
Score = 102 bits (245), Expect = 2e-24
Identities = 48/48 (100%), Positives = 48/48 (100%)
Frame = +2
Query: 107 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 250
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 1 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 48
>AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor
protein protein.
Length = 585
Score = 24.6 bits (51), Expect = 0.52
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = -3
Query: 289 YTSWRECEGKVHCTSSKSQNQVKCG 215
+ S CE + C +K+Q Q CG
Sbjct: 102 WCSTNPCENQATCVQNKNQYQCLCG 126
>EF592537-1|ABQ95983.1| 593|Tribolium castaneum
beta-N-acetylglucosaminidase NAG2 protein.
Length = 593
Score = 23.8 bits (49), Expect = 0.91
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Frame = +1
Query: 172 RRWPHSFRL*HPERIHTSPGF---ET*RRYNEPSLRILAMKYNCEKMICRKCY 321
R WP + ER+ T+P +T RR+ R++A + E ++ R CY
Sbjct: 536 RVWPRAAAA--AERLWTNPSDYVKQTERRFYRHRERLVARGIHAEALVPRWCY 586
>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
candidate 46 protein.
Length = 1451
Score = 22.6 bits (46), Expect = 2.1
Identities = 8/15 (53%), Positives = 12/15 (80%), Gaps = 1/15 (6%)
Frame = -1
Query: 177 SSNCF-PAKMRRCWS 136
S+ CF P+K+R CW+
Sbjct: 1112 SNRCFFPSKIRICWN 1126
>DQ414246-1|ABD63008.1| 126|Tribolium castaneum odd-skipped
protein.
Length = 126
Score = 21.0 bits (42), Expect = 6.4
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = +1
Query: 136 RPTTSHLCRETIRRWPHSFRL*HPERIHT 222
+P +C+ R++ S+ L ER HT
Sbjct: 75 KPKRQFICKYCNRQFTKSYNLLIHERTHT 103
>DQ372925-1|ABD17350.1| 596|Tribolium castaneum telomerase reverse
transcriptase protein.
Length = 596
Score = 21.0 bits (42), Expect = 6.4
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -3
Query: 154 DETLLVWRNTFLVLDFSF 101
D ++ R +FLV DF F
Sbjct: 479 DAAMMALRTSFLVNDFGF 496
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,469
Number of Sequences: 336
Number of extensions: 2740
Number of successful extensions: 18
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12154132
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -