Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30711
(510 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_33021| Best HMM Match : No HMM Matches (HMM E-Value=.) 154 5e-38
SB_57838| Best HMM Match : No HMM Matches (HMM E-Value=.) 154 5e-38
SB_46051| Best HMM Match : ubiquitin (HMM E-Value=0) 154 5e-38
SB_25984| Best HMM Match : ubiquitin (HMM E-Value=0) 154 5e-38
SB_28758| Best HMM Match : ubiquitin (HMM E-Value=1.5e-29) 131 4e-31
SB_23330| Best HMM Match : Ribosomal_L40e (HMM E-Value=1.8e-32) 99 1e-21
SB_20850| Best HMM Match : ubiquitin (HMM E-Value=0.00037) 89 3e-18
SB_41074| Best HMM Match : ubiquitin (HMM E-Value=2.3e-10) 58 3e-09
SB_59029| Best HMM Match : Pkinase (HMM E-Value=0) 46 1e-05
SB_30857| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 3e-04
SB_25220| Best HMM Match : Ank (HMM E-Value=6.2e-11) 42 4e-04
SB_1967| Best HMM Match : ubiquitin (HMM E-Value=4.7e-12) 40 0.002
SB_10325| Best HMM Match : ubiquitin (HMM E-Value=3.4e-05) 36 0.015
SB_56543| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.026
SB_49791| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.059
SB_32865| Best HMM Match : AA_permease (HMM E-Value=7.7e-07) 34 0.078
SB_1375| Best HMM Match : Extensin_2 (HMM E-Value=0.18) 33 0.14
SB_22742| Best HMM Match : ubiquitin (HMM E-Value=0.01) 32 0.32
SB_42868| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.55
SB_19996| Best HMM Match : PKD_channel (HMM E-Value=0) 31 0.55
SB_54258| Best HMM Match : ubiquitin (HMM E-Value=0.00055) 31 0.73
SB_11774| Best HMM Match : M (HMM E-Value=8.5e-09) 29 2.2
SB_11656| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_39225| Best HMM Match : NIF (HMM E-Value=0) 29 2.9
SB_49939| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_30503| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.9
SB_19705| Best HMM Match : zf-C2H2 (HMM E-Value=6e-07) 28 3.9
SB_45986| Best HMM Match : Extensin_2 (HMM E-Value=0.12) 28 5.1
SB_40252| Best HMM Match : LRR_1 (HMM E-Value=8.2e-12) 28 5.1
SB_35206| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=0.012) 28 5.1
SB_14271| Best HMM Match : Pkinase (HMM E-Value=2.1e-27) 28 5.1
SB_4877| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_9274| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.8
SB_23848| Best HMM Match : H-kinase_dim (HMM E-Value=1.5) 27 6.8
SB_6950| Best HMM Match : Extensin_2 (HMM E-Value=0.1) 27 9.0
>SB_33021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 157
Score = 154 bits (373), Expect = 5e-38
Identities = 75/76 (98%), Positives = 75/76 (98%)
Frame = +2
Query: 23 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 202
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 203 IQKESTLHLVLRLRGG 250
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
>SB_57838| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 533
Score = 154 bits (373), Expect = 5e-38
Identities = 75/76 (98%), Positives = 75/76 (98%)
Frame = +2
Query: 23 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 202
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 203 IQKESTLHLVLRLRGG 250
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 154 bits (373), Expect = 5e-38
Identities = 75/76 (98%), Positives = 75/76 (98%)
Frame = +2
Query: 23 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 202
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 203 IQKESTLHLVLRLRGG 250
IQKESTLHLVLRLRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 154 bits (373), Expect = 5e-38
Identities = 75/76 (98%), Positives = 75/76 (98%)
Frame = +2
Query: 23 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 202
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 203 IQKESTLHLVLRLRGG 250
IQKESTLHLVLRLRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
Score = 154 bits (373), Expect = 5e-38
Identities = 75/76 (98%), Positives = 75/76 (98%)
Frame = +2
Query: 23 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 202
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 203 IQKESTLHLVLRLRGG 250
IQKESTLHLVLRLRGG
Sbjct: 289 IQKESTLHLVLRLRGG 304
Score = 154 bits (373), Expect = 5e-38
Identities = 75/76 (98%), Positives = 75/76 (98%)
Frame = +2
Query: 23 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 202
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 203 IQKESTLHLVLRLRGG 250
IQKESTLHLVLRLRGG
Sbjct: 365 IQKESTLHLVLRLRGG 380
Score = 154 bits (373), Expect = 5e-38
Identities = 75/76 (98%), Positives = 75/76 (98%)
Frame = +2
Query: 23 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 202
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 381 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 203 IQKESTLHLVLRLRGG 250
IQKESTLHLVLRLRGG
Sbjct: 441 IQKESTLHLVLRLRGG 456
Score = 154 bits (373), Expect = 5e-38
Identities = 75/76 (98%), Positives = 75/76 (98%)
Frame = +2
Query: 23 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 202
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 203 IQKESTLHLVLRLRGG 250
IQKESTLHLVLRLRGG
Sbjct: 517 IQKESTLHLVLRLRGG 532
>SB_46051| Best HMM Match : ubiquitin (HMM E-Value=0)
Length = 381
Score = 154 bits (373), Expect = 5e-38
Identities = 75/76 (98%), Positives = 75/76 (98%)
Frame = +2
Query: 23 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 202
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 203 IQKESTLHLVLRLRGG 250
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 154 bits (373), Expect = 5e-38
Identities = 75/76 (98%), Positives = 75/76 (98%)
Frame = +2
Query: 23 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 202
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 203 IQKESTLHLVLRLRGG 250
IQKESTLHLVLRLRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 154 bits (373), Expect = 5e-38
Identities = 75/76 (98%), Positives = 75/76 (98%)
Frame = +2
Query: 23 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 202
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 203 IQKESTLHLVLRLRGG 250
IQKESTLHLVLRLRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
Score = 154 bits (373), Expect = 5e-38
Identities = 75/76 (98%), Positives = 75/76 (98%)
Frame = +2
Query: 23 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 202
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 203 IQKESTLHLVLRLRGG 250
IQKESTLHLVLRLRGG
Sbjct: 289 IQKESTLHLVLRLRGG 304
Score = 154 bits (373), Expect = 5e-38
Identities = 75/76 (98%), Positives = 75/76 (98%)
Frame = +2
Query: 23 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 202
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 203 IQKESTLHLVLRLRGG 250
IQKESTLHLVLRLRGG
Sbjct: 365 IQKESTLHLVLRLRGG 380
>SB_25984| Best HMM Match : ubiquitin (HMM E-Value=0)
Length = 147
Score = 154 bits (373), Expect = 5e-38
Identities = 75/76 (98%), Positives = 75/76 (98%)
Frame = +2
Query: 23 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 202
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 203 IQKESTLHLVLRLRGG 250
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 83.8 bits (198), Expect = 7e-17
Identities = 42/71 (59%), Positives = 55/71 (77%)
Frame = +2
Query: 23 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 202
MQI VK KT TL+VEASDT+E+VK KIQ++EGIPP QRL++ ++L D R+L+DYN
Sbjct: 77 MQISVKA-HWKTFTLDVEASDTVESVKEKIQNREGIPPKVQRLLYEEEELVDNRSLADYN 135
Query: 203 IQKESTLHLVL 235
I++ S LHL L
Sbjct: 136 IKQGSILHLFL 146
>SB_28758| Best HMM Match : ubiquitin (HMM E-Value=1.5e-29)
Length = 142
Score = 131 bits (316), Expect = 4e-31
Identities = 63/66 (95%), Positives = 65/66 (98%)
Frame = +2
Query: 14 SNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 193
++TMQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS
Sbjct: 76 TSTMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 135
Query: 194 DYNIQK 211
DYNIQK
Sbjct: 136 DYNIQK 141
>SB_23330| Best HMM Match : Ribosomal_L40e (HMM E-Value=1.8e-32)
Length = 78
Score = 99 bits (238), Expect = 1e-21
Identities = 41/45 (91%), Positives = 43/45 (95%)
Frame = +1
Query: 256 EPSLRILAMKYNCEKMICRKCYARLHPRATNCRKTKCGHTNNLRP 390
EPSLRILA KYNC+KMICRKCYARLHPRATNCRK KCGH+NNLRP
Sbjct: 29 EPSLRILAQKYNCDKMICRKCYARLHPRATNCRKKKCGHSNNLRP 73
Score = 30.3 bits (65), Expect = 0.96
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = +2
Query: 212 ESTLHLVLRLRGGTM 256
ESTLHLVLRLRGG +
Sbjct: 14 ESTLHLVLRLRGGVI 28
>SB_20850| Best HMM Match : ubiquitin (HMM E-Value=0.00037)
Length = 150
Score = 88.6 bits (210), Expect = 3e-18
Identities = 41/43 (95%), Positives = 42/43 (97%)
Frame = +2
Query: 128 IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGTM 256
IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG +
Sbjct: 2 IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGVI 44
Score = 41.9 bits (94), Expect = 3e-04
Identities = 17/19 (89%), Positives = 18/19 (94%)
Frame = +1
Query: 256 EPSLRILAMKYNCEKMICR 312
EPSLRILA KYNC+KMICR
Sbjct: 45 EPSLRILAQKYNCDKMICR 63
>SB_41074| Best HMM Match : ubiquitin (HMM E-Value=2.3e-10)
Length = 333
Score = 58.4 bits (135), Expect = 3e-09
Identities = 34/75 (45%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Frame = +2
Query: 29 IFVKTLTGKTITLEVEA-SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 205
I V TLTG+ I + ++ TI VK I+ K G P DQQRL+F G+ L D T I
Sbjct: 73 IAVLTLTGERILIPFKSPKHTIIEVKYLIEAKGGYPKDQQRLVFNGQVLSDEDTFEKVGI 132
Query: 206 QKESTLHLVLRLRGG 250
+TLHL++RL GG
Sbjct: 133 FAGATLHLIVRLLGG 147
>SB_59029| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 1023
Score = 46.4 bits (105), Expect = 1e-05
Identities = 34/108 (31%), Positives = 52/108 (48%), Gaps = 3/108 (2%)
Frame = +2
Query: 11 RSNTMQIFVKTLTGKTITLEVEASDTIENVKAKIQ---DKEGIPPDQQRLIFAGKQLEDG 181
+S M I KTL +T +E+ +T+ +K KI+ K+ P +LI+AGK L D
Sbjct: 63 KSVNMIITFKTLQQQTFKVEIGEDETVLKLKQKIEADKGKDAYPHGNIKLIYAGKILNDD 122
Query: 182 RTLSDYNIQKESTLHLVLRLRGGTMNLPFAFSP*SITVRK*FAVNAMP 325
L +YNI ++S V+ + P A +P +T A A P
Sbjct: 123 NPLKEYNIDEKS---FVVIMVAKPKPAPAAVAPAPVTTTIPQAATASP 167
>SB_30857| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 48
Score = 41.9 bits (94), Expect = 3e-04
Identities = 17/19 (89%), Positives = 18/19 (94%)
Frame = +1
Query: 256 EPSLRILAMKYNCEKMICR 312
EPSLRILA KYNC+KMICR
Sbjct: 29 EPSLRILAQKYNCDKMICR 47
Score = 30.3 bits (65), Expect = 0.96
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = +2
Query: 212 ESTLHLVLRLRGGTM 256
ESTLHLVLRLRGG +
Sbjct: 14 ESTLHLVLRLRGGVI 28
>SB_25220| Best HMM Match : Ank (HMM E-Value=6.2e-11)
Length = 744
Score = 41.5 bits (93), Expect = 4e-04
Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Frame = +2
Query: 20 TMQIFVKTLTGKTITLEVEASDT-IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 196
T Q+F T TL +D + +K++I+ K GIP D QRL F K+L D TL+
Sbjct: 5 TFQVFAALPTEDVCTLRDLTTDMHVFQLKSRIELKTGIPGDIQRLHFMNKELYDDATLAK 64
Query: 197 YNIQK 211
N+++
Sbjct: 65 VNLKQ 69
>SB_1967| Best HMM Match : ubiquitin (HMM E-Value=4.7e-12)
Length = 348
Score = 39.5 bits (88), Expect = 0.002
Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Frame = +2
Query: 23 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED-GRTLSDY 199
M++ V G TL+V +EN +A ++ + G+P + L G QL D +TL+ Y
Sbjct: 1 MKVTVTGEDGSIFTLDVSVDLEVENFRALLEFESGVPASEISLYHDGVQLSDLKKTLTAY 60
Query: 200 NIQKESTLHLVLR 238
++++ + +V R
Sbjct: 61 SVKENDVILMVRR 73
>SB_10325| Best HMM Match : ubiquitin (HMM E-Value=3.4e-05)
Length = 198
Score = 36.3 bits (80), Expect = 0.015
Identities = 23/60 (38%), Positives = 33/60 (55%)
Frame = +2
Query: 23 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 202
MQ+ VKTL +T T V +EGIP ++QRLIF GK L+D + L +++
Sbjct: 1 MQVTVKTLDSETRTFTVS--------------EEGIPAERQRLIFKGKVLQDEKKLKEFD 46
>SB_56543| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1076
Score = 35.5 bits (78), Expect = 0.026
Identities = 18/72 (25%), Positives = 33/72 (45%)
Frame = +2
Query: 47 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 226
+G L++ + TIE ++ ++ DK G PP QR I K + +L +++
Sbjct: 44 SGGAFNLQIPLNTTIEKLQNEVADKYGFPPKVQRWIIGKKMAKPNESLLQCKVRETGFTA 103
Query: 227 LVLRLRGGTMNL 262
+ L G + L
Sbjct: 104 YLYLLSGRNVEL 115
>SB_49791| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 35
Score = 34.3 bits (75), Expect = 0.059
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = +2
Query: 23 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 124
M ++++TLTG L V +TI +VKAKIQ E
Sbjct: 1 MDLYIQTLTGTAFELRVSPFETIMSVKAKIQRLE 34
>SB_32865| Best HMM Match : AA_permease (HMM E-Value=7.7e-07)
Length = 642
Score = 33.9 bits (74), Expect = 0.078
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = -1
Query: 420 GYYLILDLLFGSQIVSVSALCLATVGSTRMKTGIAFTANHF 298
G +++ LL G+ V +S+LC A GS KTG ++T +F
Sbjct: 19 GPAIVISLLIGAIPVCLSSLCYAEFGSRISKTGSSYTYTYF 59
>SB_1375| Best HMM Match : Extensin_2 (HMM E-Value=0.18)
Length = 796
Score = 33.1 bits (72), Expect = 0.14
Identities = 13/26 (50%), Positives = 20/26 (76%)
Frame = +2
Query: 125 GIPPDQQRLIFAGKQLEDGRTLSDYN 202
GIP ++QRLIF GK L+D + L +++
Sbjct: 1 GIPAERQRLIFKGKVLQDEKKLKEFD 26
>SB_22742| Best HMM Match : ubiquitin (HMM E-Value=0.01)
Length = 792
Score = 31.9 bits (69), Expect = 0.32
Identities = 16/64 (25%), Positives = 35/64 (54%)
Frame = +2
Query: 29 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 208
+ ++T G T+ +E+ ++E++KA+ + + GIP + RL LED + +
Sbjct: 185 MLLQTRGGSTLEIEITERTSVEDLKAEAELRVGIPVELIRLQVNKVNLEDSEKICERGHL 244
Query: 209 KEST 220
+++T
Sbjct: 245 QKAT 248
>SB_42868| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1353
Score = 31.1 bits (67), Expect = 0.55
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +2
Query: 86 TIENVKAKIQDKEGIPPDQQRLIFA-GKQLEDGRTLSDYNIQKESTLHL 229
T+ ++K + +K G+ RL+ GK++ D L DYNI T+ L
Sbjct: 86 TVGDLKTMVTNKTGLHVSVFRLVIPEGKEMFDCNLLKDYNISTGDTIRL 134
>SB_19996| Best HMM Match : PKD_channel (HMM E-Value=0)
Length = 746
Score = 31.1 bits (67), Expect = 0.55
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = -1
Query: 387 SQIVSVSALCLATVGSTRMKTGIAFTANHFLTVILHGENAKGRFIVP 247
S + LC+ +G+ + GIAF A L ++ G+NA+G +P
Sbjct: 252 SLLAQTLKLCIPKIGAFVIVYGIAFFAYAQLACLVFGQNAEGFMTIP 298
>SB_54258| Best HMM Match : ubiquitin (HMM E-Value=0.00055)
Length = 411
Score = 30.7 bits (66), Expect = 0.73
Identities = 18/69 (26%), Positives = 32/69 (46%)
Frame = +2
Query: 32 FVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 211
FV G+ ITL + ++ + G P + ++ K LED T++D + Q
Sbjct: 169 FVVMPEGQVITLHCNPRQSFSELRNHFSSEFGQPAEAILMLHEDKILEDQGTIADLSHQP 228
Query: 212 ESTLHLVLR 238
+TL + L+
Sbjct: 229 GATLQIELQ 237
>SB_11774| Best HMM Match : M (HMM E-Value=8.5e-09)
Length = 1998
Score = 29.1 bits (62), Expect = 2.2
Identities = 20/77 (25%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Frame = +2
Query: 35 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--NIQ 208
+K G+ ++ + +D ENV I+ PD ++ I G L+DG+T+ D + +
Sbjct: 510 LKGKLGRNLSRCILGNDETENV-GNIESS----PDSKKNILEGLDLQDGKTVEDLLSDYR 564
Query: 209 KESTLHLVLRLRGGTMN 259
+E L+ ++ GT++
Sbjct: 565 RELELYRQIKDENGTVS 581
>SB_11656| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 66
Score = 29.1 bits (62), Expect = 2.2
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +2
Query: 50 GKTITLEVE-ASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 178
G T E+E A +++E + I GIP D+Q L+ G + D
Sbjct: 10 GAMYTFEMEMAMESVETLMGSIASSTGIPVDKQVLLICGGEALD 53
>SB_39225| Best HMM Match : NIF (HMM E-Value=0)
Length = 1772
Score = 28.7 bits (61), Expect = 2.9
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -3
Query: 337 EDEDGHSIYGKSFSHSYTSWRECEGKV 257
++E I SFS T WR CEG++
Sbjct: 775 DEEMNQVIISSSFSAKLTKWRVCEGQI 801
>SB_49939| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 262
Score = 28.7 bits (61), Expect = 2.9
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +3
Query: 147 VSSLPGNN*KMAALFQTITSRKNPHFTWF 233
+ ++ N K+AA+ I+S NP FTWF
Sbjct: 8 IGAIASNAEKVAAVAGAISSLDNPGFTWF 36
>SB_30503| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1402
Score = 28.3 bits (60), Expect = 3.9
Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = +1
Query: 250 YNEPSLRILAMKYNCEKMICRKCYARLHPRATNCRK-TKCG 369
YN R KY + + + CY R+ P C K +KCG
Sbjct: 475 YNSMKYRCAHNKYIYDPKMYKHCYGRIIPVTKKCVKLSKCG 515
Score = 27.9 bits (59), Expect = 5.1
Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Frame = +1
Query: 244 RRYNEPSLRILAMKYNCEKMICRKCYARLHPRATNCRK-TKCG 369
R YN R KY + CY R+ P+ +C K KCG
Sbjct: 859 RFYNPMKYRCAHNKYIYNPKTHKYCYGRIIPKGKHCVKLPKCG 901
Score = 27.5 bits (58), Expect = 6.8
Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Frame = +1
Query: 244 RRYNEPSLRILAMKYNCEKMICRKCYARLHPRATNCRK-TKCG 369
R YN R KY R CY R+ P+ +C K +CG
Sbjct: 693 RFYNPMKYRCAHNKYIYNPKTHRYCYGRIIPKRKHCVKLPRCG 735
>SB_19705| Best HMM Match : zf-C2H2 (HMM E-Value=6e-07)
Length = 503
Score = 28.3 bits (60), Expect = 3.9
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +1
Query: 289 NCEKMICRKCYARLHPRATNCRKTKCGHTNNLRP 390
N + ++CR C R +P KC +T N RP
Sbjct: 347 NADYVLCRYCQRRFNPTVAERHIPKCANTTN-RP 379
Score = 27.1 bits (57), Expect = 9.0
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +1
Query: 289 NCEKMICRKCYARLHPRATNCRKTKCGHTNNLRP 390
N + ++CR C R +P KC +T N RP
Sbjct: 435 NPDYVLCRYCQRRFNPTVAERHIPKCANTTN-RP 467
>SB_45986| Best HMM Match : Extensin_2 (HMM E-Value=0.12)
Length = 1243
Score = 27.9 bits (59), Expect = 5.1
Identities = 13/41 (31%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = +1
Query: 250 YNEPSLRILAMKYNCEKMICRKCYARLHPRATNCRK-TKCG 369
YN + KY + + + CY R+ P C K +KCG
Sbjct: 563 YNPKKYKCAHNKYIYDPKMYKNCYGRIIPVTNKCVKLSKCG 603
Score = 27.9 bits (59), Expect = 5.1
Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Frame = +1
Query: 244 RRYNEPSLRILAMKYNCEKMICRKCYARLHPRATNCRK-TKCG 369
R YN R KY + CY R+ P+ +C K KCG
Sbjct: 1089 RFYNPMKYRCAHNKYIYNPKTHKYCYGRIIPKGKHCVKLPKCG 1131
>SB_40252| Best HMM Match : LRR_1 (HMM E-Value=8.2e-12)
Length = 481
Score = 27.9 bits (59), Expect = 5.1
Identities = 14/44 (31%), Positives = 28/44 (63%)
Frame = +2
Query: 44 LTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE 175
L G +IT+ +E D +EN++ +K+ +PP ++L+F + L+
Sbjct: 102 LGGNSITV-IEGLDKLENLRELHMEKQHLPPG-EKLLFDPRTLQ 143
>SB_35206| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=0.012)
Length = 1148
Score = 27.9 bits (59), Expect = 5.1
Identities = 14/62 (22%), Positives = 35/62 (56%)
Frame = +2
Query: 23 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 202
+Q ++T GKTI L E + ++ + ++K+G+ + ++L + ++L+ T ++
Sbjct: 714 LQDSLETAEGKTIKLTQELDEKMKLIAGIKEEKQGLAAEVKQLQKSSEELQQQLTDTEEK 773
Query: 203 IQ 208
+Q
Sbjct: 774 LQ 775
>SB_14271| Best HMM Match : Pkinase (HMM E-Value=2.1e-27)
Length = 2056
Score = 27.9 bits (59), Expect = 5.1
Identities = 10/35 (28%), Positives = 20/35 (57%)
Frame = -3
Query: 106 SFDIFDSVGSFHLQCNGLPRKGFDEYLHCVAPMKN 2
S DIF+++ +FH Q D+ + C+ P+++
Sbjct: 476 STDIFETLSNFHSQIGPKKTSNADDGITCIVPLQS 510
>SB_4877| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 517
Score = 27.9 bits (59), Expect = 5.1
Identities = 10/35 (28%), Positives = 20/35 (57%)
Frame = -3
Query: 106 SFDIFDSVGSFHLQCNGLPRKGFDEYLHCVAPMKN 2
S DIF+++ +FH Q D+ + C+ P+++
Sbjct: 457 STDIFETLSNFHSQIGPKKTSNADDGITCIVPLQS 491
>SB_9274| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1230
Score = 27.5 bits (58), Expect = 6.8
Identities = 12/26 (46%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
Frame = +1
Query: 19 HNANIRQNPYGEDHYI--GGGSFRHY 90
HNA I++N G D+Y+ GGG + Y
Sbjct: 187 HNAPIKRNCSGNDYYVKAGGGVYFEY 212
>SB_23848| Best HMM Match : H-kinase_dim (HMM E-Value=1.5)
Length = 106
Score = 27.5 bits (58), Expect = 6.8
Identities = 14/62 (22%), Positives = 34/62 (54%)
Frame = +2
Query: 23 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 202
+Q ++T GKTI L E + ++ + ++K+G+ + + L + ++L+ T ++
Sbjct: 10 LQDSLETAEGKTIKLTQELDEKMKLIAGIKEEKQGLVAEVEHLQKSSEELQQQLTDTEEK 69
Query: 203 IQ 208
+Q
Sbjct: 70 LQ 71
>SB_6950| Best HMM Match : Extensin_2 (HMM E-Value=0.1)
Length = 625
Score = 27.1 bits (57), Expect = 9.0
Identities = 14/43 (32%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Frame = +1
Query: 244 RRYNEPSLRILAMKYNCEKMICRKCYARLHPRATNCRK-TKCG 369
R YN R KY + CY R+ P+ +C K +CG
Sbjct: 84 RFYNPMKYRCAHNKYIFNPKTHKHCYGRIIPKGKHCVKLLRCG 126
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,753,915
Number of Sequences: 59808
Number of extensions: 351517
Number of successful extensions: 990
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 862
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 990
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1123894172
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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