Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30709
(469 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 130 5e-31
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 130 6e-31
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 130 6e-31
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 128 2e-30
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 128 2e-30
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 128 2e-30
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 128 2e-30
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 127 3e-30
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 127 3e-30
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 115 2e-26
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 111 2e-25
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 111 2e-25
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 72 2e-13
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 64 6e-11
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 55 2e-08
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 51 4e-07
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 40 6e-04
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 35 0.024
At3g12650.1 68416.m01575 expressed protein 30 0.90
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 30 0.90
At1g78480.1 68414.m09147 prenyltransferase/squalene oxidase repe... 29 1.2
At4g37420.1 68417.m05297 hypothetical protein contains Pfam prof... 29 2.1
At5g49190.1 68418.m06088 sucrose synthase / sucrose-UDP glucosyl... 27 4.8
At2g15550.1 68415.m01781 hypothetical protein similar to zinc fi... 27 6.3
At2g01190.1 68415.m00030 octicosapeptide/Phox/Bem1p (PB1) domain... 27 6.3
At1g29530.1 68414.m03612 expressed protein 27 6.3
At1g16690.2 68414.m01999 transcription factor-related similar to... 27 6.3
At1g16690.1 68414.m01998 transcription factor-related similar to... 27 6.3
At3g48060.1 68416.m05240 bromo-adjacent homology (BAH) domain-co... 27 8.4
At3g48050.2 68416.m05239 bromo-adjacent homology (BAH) domain-co... 27 8.4
At3g48050.1 68416.m05238 bromo-adjacent homology (BAH) domain-co... 27 8.4
At2g04190.1 68415.m00404 meprin and TRAF homology domain-contain... 27 8.4
At1g61070.1 68414.m06876 plant defensin-fusion protein, putative... 27 8.4
At1g08260.1 68414.m00911 DNA-directed DNA polymerase epsilon cat... 27 8.4
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 130 bits (314), Expect = 5e-31
Identities = 58/71 (81%), Positives = 62/71 (87%)
Frame = +3
Query: 255 SKRGILTLKYPIEHGIVTNWDHMGKIWHHTFYNELRVAPEGHPVLLTGAPLKPRANRWKM 434
SKRGILTLKYPIEHGIV+NWD M KIWHHTFYNELRVAPE HPVLLT APL P+ANR KM
Sbjct: 62 SKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 121
Query: 435 AQVMCGTFDTP 467
Q+M TF+TP
Sbjct: 122 TQIMFETFNTP 132
Score = 66.9 bits (156), Expect = 6e-12
Identities = 29/33 (87%), Positives = 32/33 (96%)
Frame = +1
Query: 163 AVFPSIVGRPRHQGVMVGMGQKDSYVGDQAQAK 261
AVFPSIVGRPRH GVMVGMGQKD+YVGD+AQ+K
Sbjct: 31 AVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
Score = 45.6 bits (103), Expect = 2e-05
Identities = 20/30 (66%), Positives = 22/30 (73%)
Frame = +2
Query: 86 EGVAALVVDNGSGMCKAGFAGDDAPRPCSP 175
E + LV DNG+GM KAGFAGDDAPR P
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFP 34
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 130 bits (313), Expect = 6e-31
Identities = 58/71 (81%), Positives = 61/71 (85%)
Frame = +3
Query: 255 SKRGILTLKYPIEHGIVTNWDHMGKIWHHTFYNELRVAPEGHPVLLTGAPLKPRANRWKM 434
SKRGILTLKYPIEHGIV NWD M KIWHHTFYNELRVAPE HPVLLT APL P+ANR KM
Sbjct: 62 SKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 121
Query: 435 AQVMCGTFDTP 467
Q+M TF+TP
Sbjct: 122 TQIMFETFNTP 132
Score = 66.9 bits (156), Expect = 6e-12
Identities = 29/33 (87%), Positives = 32/33 (96%)
Frame = +1
Query: 163 AVFPSIVGRPRHQGVMVGMGQKDSYVGDQAQAK 261
AVFPSIVGRPRH GVMVGMGQKD+YVGD+AQ+K
Sbjct: 31 AVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
Score = 45.6 bits (103), Expect = 2e-05
Identities = 20/30 (66%), Positives = 22/30 (73%)
Frame = +2
Query: 86 EGVAALVVDNGSGMCKAGFAGDDAPRPCSP 175
E + LV DNG+GM KAGFAGDDAPR P
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFP 34
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 130 bits (313), Expect = 6e-31
Identities = 58/71 (81%), Positives = 61/71 (85%)
Frame = +3
Query: 255 SKRGILTLKYPIEHGIVTNWDHMGKIWHHTFYNELRVAPEGHPVLLTGAPLKPRANRWKM 434
SKRGILTLKYPIEHGIV NWD M KIWHHTFYNELRVAPE HPVLLT APL P+ANR KM
Sbjct: 62 SKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 121
Query: 435 AQVMCGTFDTP 467
Q+M TF+TP
Sbjct: 122 TQIMFETFNTP 132
Score = 66.9 bits (156), Expect = 6e-12
Identities = 29/33 (87%), Positives = 32/33 (96%)
Frame = +1
Query: 163 AVFPSIVGRPRHQGVMVGMGQKDSYVGDQAQAK 261
AVFPSIVGRPRH GVMVGMGQKD+YVGD+AQ+K
Sbjct: 31 AVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
Score = 45.6 bits (103), Expect = 2e-05
Identities = 20/30 (66%), Positives = 22/30 (73%)
Frame = +2
Query: 86 EGVAALVVDNGSGMCKAGFAGDDAPRPCSP 175
E + LV DNG+GM KAGFAGDDAPR P
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFP 34
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 128 bits (309), Expect = 2e-30
Identities = 57/71 (80%), Positives = 61/71 (85%)
Frame = +3
Query: 255 SKRGILTLKYPIEHGIVTNWDHMGKIWHHTFYNELRVAPEGHPVLLTGAPLKPRANRWKM 434
SKRGILTLKYPIEHGIV+NWD M KIWHHTFYNELRVAPE HPVLLT APL P+ANR KM
Sbjct: 62 SKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 121
Query: 435 AQVMCGTFDTP 467
Q+M TF+ P
Sbjct: 122 TQIMFETFNVP 132
Score = 66.9 bits (156), Expect = 6e-12
Identities = 29/33 (87%), Positives = 32/33 (96%)
Frame = +1
Query: 163 AVFPSIVGRPRHQGVMVGMGQKDSYVGDQAQAK 261
AVFPSIVGRPRH GVMVGMGQKD+YVGD+AQ+K
Sbjct: 31 AVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
Score = 45.6 bits (103), Expect = 2e-05
Identities = 20/30 (66%), Positives = 22/30 (73%)
Frame = +2
Query: 86 EGVAALVVDNGSGMCKAGFAGDDAPRPCSP 175
E + LV DNG+GM KAGFAGDDAPR P
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFP 34
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 128 bits (308), Expect = 2e-30
Identities = 55/71 (77%), Positives = 62/71 (87%)
Frame = +3
Query: 255 SKRGILTLKYPIEHGIVTNWDHMGKIWHHTFYNELRVAPEGHPVLLTGAPLKPRANRWKM 434
SKRGILTLKYPIEHG+V+NWD M KIWHHTFYNELR+APE HPVLLT APL P+ANR KM
Sbjct: 62 SKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKM 121
Query: 435 AQVMCGTFDTP 467
Q+M TF++P
Sbjct: 122 TQIMFETFNSP 132
Score = 64.5 bits (150), Expect = 3e-11
Identities = 27/33 (81%), Positives = 31/33 (93%)
Frame = +1
Query: 163 AVFPSIVGRPRHQGVMVGMGQKDSYVGDQAQAK 261
AVFPS+VGRPRH GVMVGM QKD+YVGD+AQ+K
Sbjct: 31 AVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63
Score = 43.6 bits (98), Expect = 7e-05
Identities = 18/30 (60%), Positives = 22/30 (73%)
Frame = +2
Query: 86 EGVAALVVDNGSGMCKAGFAGDDAPRPCSP 175
+ + +V DNG+GM KAGFAGDDAPR P
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFP 34
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 128 bits (308), Expect = 2e-30
Identities = 55/71 (77%), Positives = 62/71 (87%)
Frame = +3
Query: 255 SKRGILTLKYPIEHGIVTNWDHMGKIWHHTFYNELRVAPEGHPVLLTGAPLKPRANRWKM 434
SKRGILTLKYPIEHG+V+NWD M KIWHHTFYNELR+APE HPVLLT APL P+ANR KM
Sbjct: 62 SKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKM 121
Query: 435 AQVMCGTFDTP 467
Q+M TF++P
Sbjct: 122 TQIMFETFNSP 132
Score = 64.5 bits (150), Expect = 3e-11
Identities = 27/33 (81%), Positives = 31/33 (93%)
Frame = +1
Query: 163 AVFPSIVGRPRHQGVMVGMGQKDSYVGDQAQAK 261
AVFPS+VGRPRH GVMVGM QKD+YVGD+AQ+K
Sbjct: 31 AVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63
Score = 43.6 bits (98), Expect = 7e-05
Identities = 18/30 (60%), Positives = 22/30 (73%)
Frame = +2
Query: 86 EGVAALVVDNGSGMCKAGFAGDDAPRPCSP 175
+ + +V DNG+GM KAGFAGDDAPR P
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFP 34
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 128 bits (308), Expect = 2e-30
Identities = 55/71 (77%), Positives = 62/71 (87%)
Frame = +3
Query: 255 SKRGILTLKYPIEHGIVTNWDHMGKIWHHTFYNELRVAPEGHPVLLTGAPLKPRANRWKM 434
SKRGILTLKYPIEHG+V+NWD M KIWHHTFYNELR+APE HPVLLT APL P+ANR KM
Sbjct: 62 SKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKM 121
Query: 435 AQVMCGTFDTP 467
Q+M TF++P
Sbjct: 122 TQIMFETFNSP 132
Score = 64.5 bits (150), Expect = 3e-11
Identities = 27/33 (81%), Positives = 31/33 (93%)
Frame = +1
Query: 163 AVFPSIVGRPRHQGVMVGMGQKDSYVGDQAQAK 261
AVFPS+VGRPRH GVMVGM QKD+YVGD+AQ+K
Sbjct: 31 AVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63
Score = 43.6 bits (98), Expect = 7e-05
Identities = 18/30 (60%), Positives = 22/30 (73%)
Frame = +2
Query: 86 EGVAALVVDNGSGMCKAGFAGDDAPRPCSP 175
+ + +V DNG+GM KAGFAGDDAPR P
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFP 34
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 127 bits (307), Expect = 3e-30
Identities = 56/71 (78%), Positives = 60/71 (84%)
Frame = +3
Query: 255 SKRGILTLKYPIEHGIVTNWDHMGKIWHHTFYNELRVAPEGHPVLLTGAPLKPRANRWKM 434
SKRGILTLKYPIEHGIV NWD M KIWHHTFYNELRVAPE HP+LLT APL P+ANR KM
Sbjct: 62 SKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKM 121
Query: 435 AQVMCGTFDTP 467
Q+M TF+ P
Sbjct: 122 TQIMFETFNAP 132
Score = 66.9 bits (156), Expect = 6e-12
Identities = 29/33 (87%), Positives = 32/33 (96%)
Frame = +1
Query: 163 AVFPSIVGRPRHQGVMVGMGQKDSYVGDQAQAK 261
AVFPSIVGRPRH GVMVGMGQKD+YVGD+AQ+K
Sbjct: 31 AVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
Score = 45.6 bits (103), Expect = 2e-05
Identities = 20/30 (66%), Positives = 22/30 (73%)
Frame = +2
Query: 86 EGVAALVVDNGSGMCKAGFAGDDAPRPCSP 175
E + LV DNG+GM KAGFAGDDAPR P
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFP 34
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 127 bits (307), Expect = 3e-30
Identities = 56/71 (78%), Positives = 60/71 (84%)
Frame = +3
Query: 255 SKRGILTLKYPIEHGIVTNWDHMGKIWHHTFYNELRVAPEGHPVLLTGAPLKPRANRWKM 434
SKRGILTLKYPIEHGIV NWD M KIWHHTFYNELRVAPE HP+LLT APL P+ANR KM
Sbjct: 62 SKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKM 121
Query: 435 AQVMCGTFDTP 467
Q+M TF+ P
Sbjct: 122 TQIMFETFNAP 132
Score = 66.9 bits (156), Expect = 6e-12
Identities = 29/33 (87%), Positives = 32/33 (96%)
Frame = +1
Query: 163 AVFPSIVGRPRHQGVMVGMGQKDSYVGDQAQAK 261
AVFPSIVGRPRH GVMVGMGQKD+YVGD+AQ+K
Sbjct: 31 AVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
Score = 45.6 bits (103), Expect = 2e-05
Identities = 20/30 (66%), Positives = 22/30 (73%)
Frame = +2
Query: 86 EGVAALVVDNGSGMCKAGFAGDDAPRPCSP 175
E + LV DNG+GM KAGFAGDDAPR P
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFP 34
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 115 bits (276), Expect = 2e-26
Identities = 48/71 (67%), Positives = 58/71 (81%)
Frame = +3
Query: 255 SKRGILTLKYPIEHGIVTNWDHMGKIWHHTFYNELRVAPEGHPVLLTGAPLKPRANRWKM 434
++RGIL+LKYPIEHG+V+NWD M KIWHHTFYNELR+ PE HP+LLT APL P+ NR KM
Sbjct: 63 ARRGILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEAPLNPKVNREKM 122
Query: 435 AQVMCGTFDTP 467
Q+M +F P
Sbjct: 123 TQIMFESFAFP 133
Score = 61.7 bits (143), Expect = 2e-10
Identities = 25/33 (75%), Positives = 32/33 (96%)
Frame = +1
Query: 163 AVFPSIVGRPRHQGVMVGMGQKDSYVGDQAQAK 261
AVFPS+VGRPRH+GVMVGM +KD++VGD+AQA+
Sbjct: 32 AVFPSVVGRPRHRGVMVGMDEKDTFVGDEAQAR 64
Score = 46.0 bits (104), Expect = 1e-05
Identities = 22/31 (70%), Positives = 24/31 (77%)
Frame = +2
Query: 83 DEGVAALVVDNGSGMCKAGFAGDDAPRPCSP 175
DE VA +V DNG+GM KAGFAGDDAPR P
Sbjct: 6 DESVA-IVCDNGTGMVKAGFAGDDAPRAVFP 35
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 111 bits (268), Expect = 2e-25
Identities = 48/71 (67%), Positives = 58/71 (81%)
Frame = +3
Query: 255 SKRGILTLKYPIEHGIVTNWDHMGKIWHHTFYNELRVAPEGHPVLLTGAPLKPRANRWKM 434
++ GILTL YP+EHG+V+NWD M KIW+HTFY+ELRVAPE HPVLLT APL P+A+R KM
Sbjct: 17 ARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPVLLTEAPLNPKADREKM 76
Query: 435 AQVMCGTFDTP 467
Q+M TF P
Sbjct: 77 TQIMFETFAVP 87
Score = 27.1 bits (57), Expect = 6.3
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +1
Query: 208 MVGMGQKDSYVGDQAQAK 261
MVGM + D +VGD A+A+
Sbjct: 1 MVGMNENDLFVGDDAEAR 18
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 111 bits (268), Expect = 2e-25
Identities = 50/73 (68%), Positives = 56/73 (76%)
Frame = +3
Query: 249 GTSKRGILTLKYPIEHGIVTNWDHMGKIWHHTFYNELRVAPEGHPVLLTGAPLKPRANRW 428
G + R ILTLK P+EHGIV NWD M KIWH+TFYNELRV PE HPVLLT AP P+ANR
Sbjct: 49 GHANRDILTLKDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHPVLLTEAPYNPKANRE 108
Query: 429 KMAQVMCGTFDTP 467
KM Q+M +FD P
Sbjct: 109 KMTQIMFESFDVP 121
Score = 34.7 bits (76), Expect = 0.032
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = +2
Query: 101 LVVDNGSGMCKAGFAGDDAPRPCSP 175
+V D G GM +AGFAGD+AP+ P
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFP 28
Score = 31.1 bits (67), Expect = 0.39
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = +1
Query: 127 VQGRFRRR*CSSAVFPSIVGRPRHQGVMVGMGQKDSYVGDQAQA 258
VQ F VFP +VGRPR G+ +SYVG++ A
Sbjct: 13 VQAGFAGDEAPKVVFPCVVGRPRD-----GLNPNESYVGEEGHA 51
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 71.7 bits (168), Expect = 2e-13
Identities = 29/59 (49%), Positives = 37/59 (62%)
Frame = +3
Query: 270 LTLKYPIEHGIVTNWDHMGKIWHHTFYNELRVAPEGHPVLLTGAPLKPRANRWKMAQVM 446
L + YP+ +GIV NWD M +W H FYNEL++ P +LLT PL P NR KM + M
Sbjct: 66 LDINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPPLNPSKNREKMIETM 124
Score = 31.5 bits (68), Expect = 0.29
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +2
Query: 101 LVVDNGSGMCKAGFAGDDAPRPCSPRSWEGPAIRASWSVWDRR 229
+V DNG+G K GFAG++ P P P +R S+ +++
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQ 49
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 63.7 bits (148), Expect = 6e-11
Identities = 33/83 (39%), Positives = 44/83 (53%)
Frame = +3
Query: 219 GTEGLLCRRSGTSKRGILTLKYPIEHGIVTNWDHMGKIWHHTFYNELRVAPEGHPVLLTG 398
G E L RS ++ L YPIEHG V +WD M + W +N LR PE H LLT
Sbjct: 71 GDEALAKSRSSSTHN----LHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLLTE 126
Query: 399 APLKPRANRWKMAQVMCGTFDTP 467
+PL P +R +++ TF+ P
Sbjct: 127 SPLTPPESREYTGEILFETFNVP 149
Score = 30.7 bits (66), Expect = 0.51
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +2
Query: 98 ALVVDNGSGMCKAGFAGDDAP 160
A+V+DNG+G K GFAG+ P
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEP 28
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 55.2 bits (127), Expect = 2e-08
Identities = 25/70 (35%), Positives = 39/70 (55%)
Frame = +3
Query: 258 KRGILTLKYPIEHGIVTNWDHMGKIWHHTFYNELRVAPEGHPVLLTGAPLKPRANRWKMA 437
+R + + PI+ GIV++WD + IW H F + L + P HP+LL PL + R K A
Sbjct: 85 RRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTEHPMLLAEPPLNTQQQREKAA 144
Query: 438 QVMCGTFDTP 467
++M + P
Sbjct: 145 ELMFEKYKVP 154
Score = 40.3 bits (90), Expect = 6e-04
Identities = 17/28 (60%), Positives = 22/28 (78%)
Frame = +2
Query: 92 VAALVVDNGSGMCKAGFAGDDAPRPCSP 175
V+A+VVD GS CKAG+AG+DAP+ P
Sbjct: 7 VSAIVVDLGSHTCKAGYAGEDAPKAVFP 34
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 50.8 bits (116), Expect = 4e-07
Identities = 22/58 (37%), Positives = 32/58 (55%)
Frame = +3
Query: 258 KRGILTLKYPIEHGIVTNWDHMGKIWHHTFYNELRVAPEGHPVLLTGAPLKPRANRWK 431
+R + + P + GIVT+WD + +W H F N L + P HP+LL PL + R K
Sbjct: 79 RRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHPMLLAEPPLNSQQQREK 136
Score = 40.3 bits (90), Expect = 6e-04
Identities = 17/28 (60%), Positives = 22/28 (78%)
Frame = +2
Query: 92 VAALVVDNGSGMCKAGFAGDDAPRPCSP 175
V+A+VVD GS CKAG+AG+DAP+ P
Sbjct: 7 VSAIVVDLGSHTCKAGYAGEDAPKAVFP 34
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 40.3 bits (90), Expect = 6e-04
Identities = 18/44 (40%), Positives = 26/44 (59%)
Frame = +3
Query: 276 LKYPIEHGIVTNWDHMGKIWHHTFYNELRVAPEGHPVLLTGAPL 407
++ PI+ G + N D +IW H F + L +AP +LLT APL
Sbjct: 61 VRRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPL 104
Score = 26.6 bits (56), Expect = 8.4
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +2
Query: 101 LVVDNGSGMCKAGFAGDDAPRPCSP 175
+V+DNG G+ KAG G+ P P
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIP 29
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 35.1 bits (77), Expect = 0.024
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Frame = +3
Query: 285 PIEHGIVTNWDHMGKIWHHTFYNEL--RVAPEGHPVLLTGAPLKPRANRWKMAQVMCGTF 458
PIE G++ +WD M + + Y L EG+ +L T P+A R ++ Q+M TF
Sbjct: 57 PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGN-ILFTDPLCTPKAIREQLVQLMFETF 115
Query: 459 D 461
+
Sbjct: 116 N 116
>At3g12650.1 68416.m01575 expressed protein
Length = 238
Score = 29.9 bits (64), Expect = 0.90
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = -3
Query: 410 LEGSPSEQDWVPLGGDTQLIVEGMMPNL 327
+EG E+D LG +T+ ++EGMM N+
Sbjct: 99 IEGPTVERDLSALGNETRQVLEGMMKNM 126
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 29.9 bits (64), Expect = 0.90
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Frame = +3
Query: 285 PIEHGIVTNWDHMGKIWHHTFYNELRVAPEG--HPVLLTGAPLKPRANRWKMAQVMCGTF 458
P + +V ++ M I + F + L G HP+L+T P +R KMA+++ T+
Sbjct: 85 PFDSNVVYQFEIMEYILDYAF-DRLGANGSGIDHPILITECACNPVQSRSKMAELLFETY 143
Query: 459 DTP 467
P
Sbjct: 144 GVP 146
>At1g78480.1 68414.m09147 prenyltransferase/squalene oxidase
repeat-containing protein similar to beta-Amyrin
Synthase GI:3688600 from [Panax ginseng]
Length = 202
Score = 29.5 bits (63), Expect = 1.2
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = -1
Query: 196 GGAFPRSRGTRPRSIISCETGLAHTGAIVYYQRGNSFVAHLELVFN 59
G F SR RP + E L + + +++ +SF+ HLE +F+
Sbjct: 76 GEEFLSSRLCRPPMVTGLEKSLDLSSSFLHWYVSSSFIGHLEEIFD 121
>At4g37420.1 68417.m05297 hypothetical protein contains Pfam profile
PF01697: Domain of unknown function
Length = 588
Score = 28.7 bits (61), Expect = 2.1
Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 3/63 (4%)
Frame = +3
Query: 147 EMMLLGRVPLDRGKAPPSG--RHGRYG-TEGLLCRRSGTSKRGILTLKYPIEHGIVTNWD 317
+ ++G+V + PS +H R G T+G CRR + + +EH + T
Sbjct: 424 DQSMIGQVSFKSHEFGPSNQTKHPRGGVTQGYTCRREEDQRHKSIVRLSAVEHSLYTAIH 483
Query: 318 HMG 326
H G
Sbjct: 484 HFG 486
>At5g49190.1 68418.m06088 sucrose synthase / sucrose-UDP
glucosyltransferase (SUS2) nearly identical to SP|Q00917
Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP
glucosyltransferase) {Arabidopsis thaliana} (SUS2);
contains Pfam profile: PF00862 sucrose synthase
Length = 807
Score = 27.5 bits (58), Expect = 4.8
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 6/59 (10%)
Frame = +3
Query: 240 RRSGTSKRGILTLKYPIEHGIVTNWDHMGKIWHH--TF----YNELRVAPEGHPVLLTG 398
R SGT IL + + E GI+ W +W + TF NE+ +G P L+ G
Sbjct: 352 RVSGTEHAHILRIPFRTEKGILRKWISRFDVWPYLETFAEDASNEISAELQGVPNLIIG 410
>At2g15550.1 68415.m01781 hypothetical protein similar to zinc
finger protein [Arabidopsis thaliana] GI:976277
Length = 589
Score = 27.1 bits (57), Expect = 6.3
Identities = 17/50 (34%), Positives = 22/50 (44%)
Frame = -2
Query: 222 SHTDHDALMAGPSHDRGEHGRGASSPAKPALHIPEPLSTTNAATPSSHIL 73
S +H L+ GP R H RG S A P PL + + T S +L
Sbjct: 269 SERNHLPLLNGPPSSRPYHSRGEKSSAPPNKQ-SSPLLSDSQLTLSDTVL 317
>At2g01190.1 68415.m00030 octicosapeptide/Phox/Bem1p (PB1)
domain-containing protein Pfam profile PF00564: PB1
domain
Length = 720
Score = 27.1 bits (57), Expect = 6.3
Identities = 13/47 (27%), Positives = 25/47 (53%)
Frame = -3
Query: 425 SVGPGLEGSPSEQDWVPLGGDTQLIVEGMMPNLPHVIPVSDDSVFDG 285
S G + P ++ +GGDT+++V +LP +I +++ DG
Sbjct: 80 SYGGHILPRPHDKSLCYMGGDTRIVVVDRNSSLPSLIARLSNTLLDG 126
>At1g29530.1 68414.m03612 expressed protein
Length = 236
Score = 27.1 bits (57), Expect = 6.3
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +3
Query: 351 NELRVAPEGHPVLLTGAPLKPRANRWKMAQVMCGTFD 461
+E+ V+PE P+LL G P+ R + W CG FD
Sbjct: 197 SEVPVSPEEKPLLLPGPPVVRRTS-WLSC---CGLFD 229
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 27.1 bits (57), Expect = 6.3
Identities = 10/34 (29%), Positives = 17/34 (50%)
Frame = +3
Query: 270 LTLKYPIEHGIVTNWDHMGKIWHHTFYNELRVAP 371
L++KY + H I + W + +IW L+ P
Sbjct: 178 LSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP 211
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 27.1 bits (57), Expect = 6.3
Identities = 10/34 (29%), Positives = 17/34 (50%)
Frame = +3
Query: 270 LTLKYPIEHGIVTNWDHMGKIWHHTFYNELRVAP 371
L++KY + H I + W + +IW L+ P
Sbjct: 178 LSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP 211
>At3g48060.1 68416.m05240 bromo-adjacent homology (BAH)
domain-containing protein contains Pfam profile PF01426:
BAH domain
Length = 1611
Score = 26.6 bits (56), Expect = 8.4
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +2
Query: 371 RGAPSPAHWGSPQAQGQQMEDGPGHVRNI 457
R APSP G+ GQQ G G V +
Sbjct: 477 RSAPSPGSGGNVSKDGQQRNAGAGGVSEV 505
>At3g48050.2 68416.m05239 bromo-adjacent homology (BAH)
domain-containing protein contains Pfam profile PF01426:
BAH domain
Length = 1613
Score = 26.6 bits (56), Expect = 8.4
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +2
Query: 371 RGAPSPAHWGSPQAQGQQMEDGPGHVRNI 457
R APSP G+ GQQ G G V +
Sbjct: 477 RSAPSPGSGGNVSKDGQQRNAGAGGVSEV 505
>At3g48050.1 68416.m05238 bromo-adjacent homology (BAH)
domain-containing protein contains Pfam profile PF01426:
BAH domain
Length = 1613
Score = 26.6 bits (56), Expect = 8.4
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +2
Query: 371 RGAPSPAHWGSPQAQGQQMEDGPGHVRNI 457
R APSP G+ GQQ G G V +
Sbjct: 477 RSAPSPGSGGNVSKDGQQRNAGAGGVSEV 505
>At2g04190.1 68415.m00404 meprin and TRAF homology domain-containing
protein / MATH domain-containing protein similar to
ubiquitin-specific protease 12 [Arabidopsis thaliana]
GI:11993471; contains Pfam profile PF00917: MATH domain
Length = 411
Score = 26.6 bits (56), Expect = 8.4
Identities = 15/40 (37%), Positives = 16/40 (40%)
Frame = -2
Query: 192 GPSHDRGEHGRGASSPAKPALHIPEPLSTTNAATPSSHIL 73
GP + G GRG S H PE T PS IL
Sbjct: 85 GPGYGGGGDGRGYGSETGGGNHGPEVTRTLRDEPPSHRIL 124
>At1g61070.1 68414.m06876 plant defensin-fusion protein, putative
(PDF2.4) plant defensin protein family member, personal
communication, Bart Thomma
(Bart.Thomma@agr.kuleuven.ac.be); contains gamma-thionin
domain
Length = 76
Score = 26.6 bits (56), Expect = 8.4
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -3
Query: 191 GLPTIEGNTAEEHHLLRNRPCTYRSHC 111
GL T+E T E L N PC S+C
Sbjct: 23 GLVTVEARTCETSSNLFNGPCLSSSNC 49
>At1g08260.1 68414.m00911 DNA-directed DNA polymerase epsilon
catalytic subunit, putative similar to SP|Q07864 DNA
polymerase epsilon, catalytic subunit A (EC 2.7.7.7) (DNA
polymerase II subunit A) {Homo sapiens}; contains Pfam
profiles: PF03175 DNA polymerase type B, organellar and
viral, PF00136 DNA polymerase family B, PF03104 DNA
polymerase family B, exonuclease domain
Length = 2271
Score = 26.6 bits (56), Expect = 8.4
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -1
Query: 313 QLVTIPCSMGYLRVRIPLLLVPDLLHK 233
+++TIP +M + +P +L PD LHK
Sbjct: 1133 KVITIPAAMQKVANPVPRVLHPDWLHK 1159
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,015,262
Number of Sequences: 28952
Number of extensions: 289553
Number of successful extensions: 777
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 723
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 776
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 791932800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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