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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30708
         (687 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z54216-9|CAN86906.1|  155|Caenorhabditis elegans Hypothetical pr...    47   1e-05
Z54216-8|CAA90948.1|  101|Caenorhabditis elegans Hypothetical pr...    44   1e-04
Z54216-7|CAI46586.1|  299|Caenorhabditis elegans Hypothetical pr...    44   1e-04
Z54216-6|CAB76416.2|  319|Caenorhabditis elegans Hypothetical pr...    44   1e-04
AY835433-1|AAX37360.1|  331|Caenorhabditis elegans bZIP transcri...    33   0.14 
AY835432-1|AAX37359.1|  467|Caenorhabditis elegans bZIP transcri...    33   0.14 
AF016440-2|AAB65905.2|  331|Caenorhabditis elegans Abnormal ever...    33   0.14 
AF016440-1|ABA54419.1|  467|Caenorhabditis elegans Abnormal ever...    33   0.14 
U10402-8|AAA19070.2| 1024|Caenorhabditis elegans Hypothetical pr...    31   0.77 
AY551965-1|AAS65429.1| 2395|Caenorhabditis elegans Swi/Snf famil...    30   1.8  
AL132904-26|CAC35851.3| 2395|Caenorhabditis elegans Hypothetical...    30   1.8  
AL132862-27|CAB60564.1|  682|Caenorhabditis elegans Hypothetical...    30   1.8  
Z82268-9|CAD89738.1|  509|Caenorhabditis elegans Hypothetical pr...    29   2.4  
Z82268-8|CAB05201.1| 1222|Caenorhabditis elegans Hypothetical pr...    29   2.4  
AL023835-17|CAD89760.1|  509|Caenorhabditis elegans Hypothetical...    29   2.4  
AL023835-16|CAA19496.1| 1222|Caenorhabditis elegans Hypothetical...    29   2.4  
Z34799-2|CAA84318.1|  692|Caenorhabditis elegans Hypothetical pr...    29   3.1  
Z82083-9|CAB04975.1|  635|Caenorhabditis elegans Hypothetical pr...    28   5.4  
Z81503-6|CAB04115.1|  635|Caenorhabditis elegans Hypothetical pr...    28   5.4  
Z50006-7|CAA90302.2| 1461|Caenorhabditis elegans Hypothetical pr...    28   5.4  
Z50004-4|CAA90293.2| 1461|Caenorhabditis elegans Hypothetical pr...    28   5.4  
U97194-8|AAB52447.3| 1254|Caenorhabditis elegans Prion-like-(q/n...    28   5.4  
U29612-3|AAA68802.2|  289|Caenorhabditis elegans Hypothetical pr...    28   5.4  
AB066246-1|BAC05514.1| 1461|Caenorhabditis elegans ADT-1 protein.      28   5.4  
Z66511-5|CAA91317.1| 1095|Caenorhabditis elegans Hypothetical pr...    28   7.2  
U41015-1|AAA82317.2| 1396|Caenorhabditis elegans Multidrug resis...    28   7.2  
AL033514-34|CAA22113.1|  463|Caenorhabditis elegans Hypothetical...    28   7.2  
AL033514-33|CAB54500.1|  480|Caenorhabditis elegans Hypothetical...    28   7.2  
AF160493-1|AAD43348.1|  465|Caenorhabditis elegans DNA-binding p...    28   7.2  
AF160492-1|AAD43347.1|  463|Caenorhabditis elegans DNA-binding p...    28   7.2  
AF025467-1|AAB71039.2|  528|Caenorhabditis elegans Hypothetical ...    28   7.2  
AL132943-3|CAB81974.1|  345|Caenorhabditis elegans Hypothetical ...    27   9.5  
AL034393-6|CAA22321.1|  507|Caenorhabditis elegans Hypothetical ...    27   9.5  

>Z54216-9|CAN86906.1|  155|Caenorhabditis elegans Hypothetical
           protein T24H10.7d protein.
          Length = 155

 Score = 46.8 bits (106), Expect = 1e-05
 Identities = 20/34 (58%), Positives = 28/34 (82%)
 Frame = +2

Query: 554 PLSPIDMDTQEKIKLERKRQRNRVAASKCRRRKL 655
           P++ + +D QEK KLERKR RNR AA+KCR++K+
Sbjct: 69  PINMMALDDQEKKKLERKRARNRQAATKCRQKKM 102


>Z54216-8|CAA90948.1|  101|Caenorhabditis elegans Hypothetical
           protein T24H10.7c protein.
          Length = 101

 Score = 44.0 bits (99), Expect = 1e-04
 Identities = 19/28 (67%), Positives = 24/28 (85%)
 Frame = +2

Query: 572 MDTQEKIKLERKRQRNRVAASKCRRRKL 655
           +D QEK KLERKR RNR AA+KCR++K+
Sbjct: 21  LDDQEKKKLERKRARNRQAATKCRQKKM 48


>Z54216-7|CAI46586.1|  299|Caenorhabditis elegans Hypothetical
           protein T24H10.7b protein.
          Length = 299

 Score = 44.0 bits (99), Expect = 1e-04
 Identities = 19/28 (67%), Positives = 24/28 (85%)
 Frame = +2

Query: 572 MDTQEKIKLERKRQRNRVAASKCRRRKL 655
           +D QEK KLERKR RNR AA+KCR++K+
Sbjct: 219 LDDQEKKKLERKRARNRQAATKCRQKKM 246


>Z54216-6|CAB76416.2|  319|Caenorhabditis elegans Hypothetical
           protein T24H10.7a protein.
          Length = 319

 Score = 44.0 bits (99), Expect = 1e-04
 Identities = 19/28 (67%), Positives = 24/28 (85%)
 Frame = +2

Query: 572 MDTQEKIKLERKRQRNRVAASKCRRRKL 655
           +D QEK KLERKR RNR AA+KCR++K+
Sbjct: 239 LDDQEKKKLERKRARNRQAATKCRQKKM 266


>AY835433-1|AAX37360.1|  331|Caenorhabditis elegans bZIP
           transcription factor FOS-1b protein.
          Length = 331

 Score = 33.5 bits (73), Expect = 0.14
 Identities = 14/40 (35%), Positives = 26/40 (65%)
 Frame = +2

Query: 536 SAASTPPLSPIDMDTQEKIKLERKRQRNRVAASKCRRRKL 655
           S+A   P    +M+  +  K  ++RQRN+ AA++CR+R++
Sbjct: 10  SSAGRKPKEEDNMEDDDDDKRLKRRQRNKEAAARCRQRRI 49


>AY835432-1|AAX37359.1|  467|Caenorhabditis elegans bZIP
           transcription factor FOS-1a protein.
          Length = 467

 Score = 33.5 bits (73), Expect = 0.14
 Identities = 14/40 (35%), Positives = 26/40 (65%)
 Frame = +2

Query: 536 SAASTPPLSPIDMDTQEKIKLERKRQRNRVAASKCRRRKL 655
           S+A   P    +M+  +  K  ++RQRN+ AA++CR+R++
Sbjct: 146 SSAGRKPKEEDNMEDDDDDKRLKRRQRNKEAAARCRQRRI 185


>AF016440-2|AAB65905.2|  331|Caenorhabditis elegans Abnormal
           eversion of vulva protein5, isoform a protein.
          Length = 331

 Score = 33.5 bits (73), Expect = 0.14
 Identities = 14/40 (35%), Positives = 26/40 (65%)
 Frame = +2

Query: 536 SAASTPPLSPIDMDTQEKIKLERKRQRNRVAASKCRRRKL 655
           S+A   P    +M+  +  K  ++RQRN+ AA++CR+R++
Sbjct: 10  SSAGRKPKEEDNMEDDDDDKRLKRRQRNKEAAARCRQRRI 49


>AF016440-1|ABA54419.1|  467|Caenorhabditis elegans Abnormal
           eversion of vulva protein5, isoform b protein.
          Length = 467

 Score = 33.5 bits (73), Expect = 0.14
 Identities = 14/40 (35%), Positives = 26/40 (65%)
 Frame = +2

Query: 536 SAASTPPLSPIDMDTQEKIKLERKRQRNRVAASKCRRRKL 655
           S+A   P    +M+  +  K  ++RQRN+ AA++CR+R++
Sbjct: 146 SSAGRKPKEEDNMEDDDDDKRLKRRQRNKEAAARCRQRRI 185


>U10402-8|AAA19070.2| 1024|Caenorhabditis elegans Hypothetical
           protein C34E10.8 protein.
          Length = 1024

 Score = 31.1 bits (67), Expect = 0.77
 Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
 Frame = +2

Query: 533 PSAASTPPLSPIDMDTQEKIKLERKRQRNRVAASKCRRRKL-GTYFQSWKRK 685
           P A  TPP++   +  Q+K+K++ +   ++  AS  R R +  + F   K+K
Sbjct: 406 PKANRTPPMTSQQLHEQQKLKMQEEEMMSQTCASDFRVRPIDASQFGGGKKK 457


>AY551965-1|AAS65429.1| 2395|Caenorhabditis elegans Swi/Snf family
           ATPase protein.
          Length = 2395

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 15/47 (31%), Positives = 26/47 (55%)
 Frame = +2

Query: 488 RAIPHSHVKDEPQTVPSAASTPPLSPIDMDTQEKIKLERKRQRNRVA 628
           R    S   D+P T  S+A  PP SPI ++T E   +E ++++ + +
Sbjct: 16  RTSSRSVADDQPST--SSAVAPPPSPIAIETDEDAVVEEEKKKKKTS 60


>AL132904-26|CAC35851.3| 2395|Caenorhabditis elegans Hypothetical
           protein Y111B2A.22 protein.
          Length = 2395

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 15/47 (31%), Positives = 26/47 (55%)
 Frame = +2

Query: 488 RAIPHSHVKDEPQTVPSAASTPPLSPIDMDTQEKIKLERKRQRNRVA 628
           R    S   D+P T  S+A  PP SPI ++T E   +E ++++ + +
Sbjct: 16  RTSSRSVADDQPST--SSAVAPPPSPIAIETDEDAVVEEEKKKKKTS 60


>AL132862-27|CAB60564.1|  682|Caenorhabditis elegans Hypothetical
           protein Y73F8A.35 protein.
          Length = 682

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = +3

Query: 390 YARPFVEALDKLHHGEAVT 446
           Y RPF  AL++ HHGE +T
Sbjct: 314 YMRPFQNALERPHHGEFIT 332


>Z82268-9|CAD89738.1|  509|Caenorhabditis elegans Hypothetical
           protein Y37A1B.1b protein.
          Length = 509

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 40/114 (35%), Positives = 54/114 (47%), Gaps = 8/114 (7%)
 Frame = +2

Query: 302 SERYGDNRYPYSGSACLISRSSTYGGTRNVCATFRRS--ARQAAP--RRGSDAARTSSIC 469
           S+R+G    P SG++    R+   GG R   +   RS  AR+ +P  RR S   RTSS  
Sbjct: 190 SQRWG--AAPASGTS---DRADRNGGARGNDSPLHRSSAARRHSPPPRRASPPRRTSSPK 244

Query: 470 RFGQAARAIPHSHVKDEPQTVPSAASTPP---LSPIDMDT-QEKIKLERKRQRN 619
           R  + AR I  S    EP+ V    S PP    SP    +     K +RKR+R+
Sbjct: 245 RDARPAREIRDSR---EPREV--RRSPPPRRAASPRKASSPSAPAKNDRKRERS 293


>Z82268-8|CAB05201.1| 1222|Caenorhabditis elegans Hypothetical
           protein Y37A1B.1a protein.
          Length = 1222

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 40/114 (35%), Positives = 54/114 (47%), Gaps = 8/114 (7%)
 Frame = +2

Query: 302 SERYGDNRYPYSGSACLISRSSTYGGTRNVCATFRRS--ARQAAP--RRGSDAARTSSIC 469
           S+R+G    P SG++    R+   GG R   +   RS  AR+ +P  RR S   RTSS  
Sbjct: 190 SQRWG--AAPASGTS---DRADRNGGARGNDSPLHRSSAARRHSPPPRRASPPRRTSSPK 244

Query: 470 RFGQAARAIPHSHVKDEPQTVPSAASTPP---LSPIDMDT-QEKIKLERKRQRN 619
           R  + AR I  S    EP+ V    S PP    SP    +     K +RKR+R+
Sbjct: 245 RDARPAREIRDSR---EPREV--RRSPPPRRAASPRKASSPSAPAKNDRKRERS 293


>AL023835-17|CAD89760.1|  509|Caenorhabditis elegans Hypothetical
           protein Y37A1B.1b protein.
          Length = 509

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 40/114 (35%), Positives = 54/114 (47%), Gaps = 8/114 (7%)
 Frame = +2

Query: 302 SERYGDNRYPYSGSACLISRSSTYGGTRNVCATFRRS--ARQAAP--RRGSDAARTSSIC 469
           S+R+G    P SG++    R+   GG R   +   RS  AR+ +P  RR S   RTSS  
Sbjct: 190 SQRWG--AAPASGTS---DRADRNGGARGNDSPLHRSSAARRHSPPPRRASPPRRTSSPK 244

Query: 470 RFGQAARAIPHSHVKDEPQTVPSAASTPP---LSPIDMDT-QEKIKLERKRQRN 619
           R  + AR I  S    EP+ V    S PP    SP    +     K +RKR+R+
Sbjct: 245 RDARPAREIRDSR---EPREV--RRSPPPRRAASPRKASSPSAPAKNDRKRERS 293


>AL023835-16|CAA19496.1| 1222|Caenorhabditis elegans Hypothetical
           protein Y37A1B.1a protein.
          Length = 1222

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 40/114 (35%), Positives = 54/114 (47%), Gaps = 8/114 (7%)
 Frame = +2

Query: 302 SERYGDNRYPYSGSACLISRSSTYGGTRNVCATFRRS--ARQAAP--RRGSDAARTSSIC 469
           S+R+G    P SG++    R+   GG R   +   RS  AR+ +P  RR S   RTSS  
Sbjct: 190 SQRWG--AAPASGTS---DRADRNGGARGNDSPLHRSSAARRHSPPPRRASPPRRTSSPK 244

Query: 470 RFGQAARAIPHSHVKDEPQTVPSAASTPP---LSPIDMDT-QEKIKLERKRQRN 619
           R  + AR I  S    EP+ V    S PP    SP    +     K +RKR+R+
Sbjct: 245 RDARPAREIRDSR---EPREV--RRSPPPRRAASPRKASSPSAPAKNDRKRERS 293


>Z34799-2|CAA84318.1|  692|Caenorhabditis elegans Hypothetical
           protein F34D10.4 protein.
          Length = 692

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 20/76 (26%), Positives = 31/76 (40%)
 Frame = +2

Query: 407 RSARQAAPRRGSDAARTSSICRFGQAARAIPHSHVKDEPQTVPSAASTPPLSPIDMDTQE 586
           R+      R  S A   SS  R  ++ R  P         T+P   STP   P+D++ ++
Sbjct: 377 RATASVGARAPSRAPAPSSTSRETRSTRRSPSKGPSAPAYTLPFGGSTPNHEPMDLELED 436

Query: 587 KIKLERKRQRNRVAAS 634
            +   R   R R + S
Sbjct: 437 PVPPPRP-DRPRASTS 451


>Z82083-9|CAB04975.1|  635|Caenorhabditis elegans Hypothetical
           protein ZK1010.9 protein.
          Length = 635

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +1

Query: 151 PLSGPVENLKRPLTLDVGRGGKRSRI 228
           P  GPV+  K+P T+D GR   R+++
Sbjct: 34  PTKGPVQPQKKPTTVDNGRRAYRNQV 59


>Z81503-6|CAB04115.1|  635|Caenorhabditis elegans Hypothetical
           protein ZK1010.9 protein.
          Length = 635

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +1

Query: 151 PLSGPVENLKRPLTLDVGRGGKRSRI 228
           P  GPV+  K+P T+D GR   R+++
Sbjct: 34  PTKGPVQPQKKPTTVDNGRRAYRNQV 59


>Z50006-7|CAA90302.2| 1461|Caenorhabditis elegans Hypothetical
           protein C02B4.1 protein.
          Length = 1461

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 14/45 (31%), Positives = 23/45 (51%)
 Frame = +3

Query: 108 FRPQHGDHLL*RAISSQRPCGKP*KAPNLGCWAGWETFTNRCTRS 242
           FRP   D    + +  +RPC       N GCW  W+ +++ C++S
Sbjct: 782 FRPCLTDQCSSKHLQEERPCD------NEGCWTNWDEWSS-CSQS 819


>Z50004-4|CAA90293.2| 1461|Caenorhabditis elegans Hypothetical
           protein C02B4.1 protein.
          Length = 1461

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 14/45 (31%), Positives = 23/45 (51%)
 Frame = +3

Query: 108 FRPQHGDHLL*RAISSQRPCGKP*KAPNLGCWAGWETFTNRCTRS 242
           FRP   D    + +  +RPC       N GCW  W+ +++ C++S
Sbjct: 782 FRPCLTDQCSSKHLQEERPCD------NEGCWTNWDEWSS-CSQS 819


>U97194-8|AAB52447.3| 1254|Caenorhabditis elegans
           Prion-like-(q/n-rich)-domain-bearingprotein protein 20
           protein.
          Length = 1254

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 16/47 (34%), Positives = 22/47 (46%)
 Frame = +2

Query: 530 VPSAASTPPLSPIDMDTQEKIKLERKRQRNRVAASKCRRRKLGTYFQ 670
           +PS +S  P SP DM    +  L + R   R+ A   +R K    FQ
Sbjct: 192 LPSTSSGIPASPADMTASSRNPLRKVRYSLRLPAKAAQRLKRIANFQ 238


>U29612-3|AAA68802.2|  289|Caenorhabditis elegans Hypothetical
           protein C09B8.4 protein.
          Length = 289

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 12/17 (70%), Positives = 13/17 (76%)
 Frame = +2

Query: 341 SACLISRSSTYGGTRNV 391
           S CL S SSTYGG RN+
Sbjct: 7   SHCLKSSSSTYGGIRNI 23


>AB066246-1|BAC05514.1| 1461|Caenorhabditis elegans ADT-1 protein.
          Length = 1461

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 14/45 (31%), Positives = 23/45 (51%)
 Frame = +3

Query: 108 FRPQHGDHLL*RAISSQRPCGKP*KAPNLGCWAGWETFTNRCTRS 242
           FRP   D    + +  +RPC       N GCW  W+ +++ C++S
Sbjct: 782 FRPCLTDQCSSKHLQEERPCD------NEGCWTNWDEWSS-CSQS 819


>Z66511-5|CAA91317.1| 1095|Caenorhabditis elegans Hypothetical
           protein F07A11.4 protein.
          Length = 1095

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 26/97 (26%), Positives = 40/97 (41%)
 Frame = +2

Query: 326 YPYSGSACLISRSSTYGGTRNVCATFRRSARQAAPRRGSDAARTSSICRFGQAARAIPHS 505
           YP + S+   ++SS     R   A    S     P R +   R SS  R G ++ A P  
Sbjct: 248 YPTTSSSSS-AQSSAQSEFRRSVAPSPTSTSTTTPYRSN---RYSSATRGGNSSSAAPLD 303

Query: 506 HVKDEPQTVPSAASTPPLSPIDMDTQEKIKLERKRQR 616
            +     +  S A+TPP +   + T     L  +R+R
Sbjct: 304 DIMSTSYS--SVAATPPPAYSQLSTSTSTLLRTRRER 338


>U41015-1|AAA82317.2| 1396|Caenorhabditis elegans Multidrug
           resistance protein familyprotein 6 protein.
          Length = 1396

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = +2

Query: 503 SHVKDEPQTVPSAASTPPLSPIDMDTQEKIKLERKRQR 616
           + V+ +   V    S+PP SP+++++ EKI  E   QR
Sbjct: 708 TEVQSDELFVDGPPSSPPPSPVNIESMEKINKESIFQR 745


>AL033514-34|CAA22113.1|  463|Caenorhabditis elegans Hypothetical
           protein Y75B8A.35b protein.
          Length = 463

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = +2

Query: 584 EKIKLERKRQRNRVAASKCRRRK 652
           EK KLERK+++NR  A  C + +
Sbjct: 262 EKEKLERKKEQNRANAKNCVKNR 284


>AL033514-33|CAB54500.1|  480|Caenorhabditis elegans Hypothetical
           protein Y75B8A.35a protein.
          Length = 480

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = +2

Query: 584 EKIKLERKRQRNRVAASKCRRRK 652
           EK KLERK+++NR  A  C + +
Sbjct: 279 EKEKLERKKEQNRANAKNCVKNR 301


>AF160493-1|AAD43348.1|  465|Caenorhabditis elegans DNA-binding
           protein ZIP-1 protein.
          Length = 465

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = +2

Query: 584 EKIKLERKRQRNRVAASKCRRRK 652
           EK KLERK+++NR  A  C + +
Sbjct: 279 EKEKLERKKEQNRANAKNCVKNR 301


>AF160492-1|AAD43347.1|  463|Caenorhabditis elegans DNA-binding
           protein ZIP-1 protein.
          Length = 463

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = +2

Query: 584 EKIKLERKRQRNRVAASKCRRRK 652
           EK KLERK+++NR  A  C + +
Sbjct: 262 EKEKLERKKEQNRANAKNCVKNR 284


>AF025467-1|AAB71039.2|  528|Caenorhabditis elegans Hypothetical
           protein R148.5a protein.
          Length = 528

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = +2

Query: 506 HVKDEPQTVPSAASTPPLSPIDMDTQEKIKLERKRQR 616
           H +   QTV +  + P   P+D +  EK+KL+   +R
Sbjct: 486 HAEVASQTVETEITRPDSPPVDYEAFEKMKLKENSRR 522


>AL132943-3|CAB81974.1|  345|Caenorhabditis elegans Hypothetical
           protein Y116F11B.6 protein.
          Length = 345

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 11/18 (61%), Positives = 15/18 (83%)
 Frame = +2

Query: 593 KLERKRQRNRVAASKCRR 646
           K + KR+RNR+AA+K RR
Sbjct: 133 KAKTKRERNRIAAAKSRR 150


>AL034393-6|CAA22321.1|  507|Caenorhabditis elegans Hypothetical
           protein Y18D10A.8 protein.
          Length = 507

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = +2

Query: 500 HSHVKDEPQTVPSAASTPPLSPIDMDTQEKIKLER 604
           +S +  E Q++PS  +T  +   D D  E IKLE+
Sbjct: 330 YSGMSSENQSIPSQQNTANIDEDDDDDDEDIKLEQ 364


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,601,102
Number of Sequences: 27780
Number of extensions: 357850
Number of successful extensions: 1087
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1033
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1085
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1571291122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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