Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30707
         (665 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    26   0.32 
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   2.2  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    23   3.0  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    23   3.0  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    23   3.0  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    22   3.9  
DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    21   6.9  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   9.1  

>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 25.8 bits (54), Expect = 0.32
 Identities = 16/73 (21%), Positives = 37/73 (50%), Gaps = 4/73 (5%)
 Frame = -3

Query: 498 NIFEWI----KHFANVITFRLGMAI*DRLIE*PIFCHFLNRYLVLNRYFTLENRHSNFSV 331
           N+F W+     ++A      L   +   +I+  I+  FL  +++     T+++++     
Sbjct: 103 NVFFWVIILMSNYAFTRIILLKSVLEIVIIDIEIYSQFLYGFMIYLILDTIKSKYRQMHR 162

Query: 330 LVKNHKIITN*KF 292
           L+ N+K+IT+ +F
Sbjct: 163 LLANYKVITSDEF 175


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +3

Query: 324  LPKLKNSNVDFQG*NIDSVLNID 392
            +P L+N N+  Q  N+DS L  +
Sbjct: 1257 VPNLRNQNLSHQAKNLDSNLKYE 1279


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = -3

Query: 294 FKLCAPRALIFQSKKIRNYIFAIIRYSVNFT 202
           + +   +A  F  KK+ NY   +I + V FT
Sbjct: 306 YSILIKKADSFCKKKLENYSLQLINHRVVFT 336


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 10/34 (29%), Positives = 19/34 (55%)
 Frame = +2

Query: 383 KYRFKKWQKIGYSINRSQIAIPNLKVITFAKCLI 484
           K  + ++Q   Y +  + I   NL +IT++ C+I
Sbjct: 151 KNMWTRFQLKYYQVTGTPIIFHNLTLITYSLCVI 184


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 10/34 (29%), Positives = 19/34 (55%)
 Frame = +2

Query: 383 KYRFKKWQKIGYSINRSQIAIPNLKVITFAKCLI 484
           K  + ++Q   Y +  + I   NL +IT++ C+I
Sbjct: 151 KNMWTRFQLKYYQVTGTPIIFHNLTLITYSLCVI 184


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -3

Query: 393 NRYLVLNRYFTLENRHSNFSVLVK 322
           N YLVLN+Y  +++      +L K
Sbjct: 27  NTYLVLNKYLLVKHSKPKMPLLPK 50


>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
           protein 15 protein.
          Length = 146

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +2

Query: 530 QFSHQFVTSSMDKGDCTK 583
           Q +  ++   +DKG CTK
Sbjct: 36  QMTRNYLDCVLDKGKCTK 53


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = -3

Query: 351 RHSNFSVLVKNHK 313
           RH NFS+ +  H+
Sbjct: 76  RHENFSLFIPKHR 88


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,305
Number of Sequences: 336
Number of extensions: 3114
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17281430
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)