Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30706
         (516 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL032632-9|CAA21588.2| 1464|Caenorhabditis elegans Hypothetical ...    31   0.37 
Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical pr...    29   1.5  
Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical pr...    29   1.5  
X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy ch...    29   1.5  
M37233-1|AAA28121.1|  260|Caenorhabditis elegans myosin II protein.    29   1.5  
Z71266-12|CAA95848.1| 1938|Caenorhabditis elegans Hypothetical p...    29   2.0  
Z71261-8|CAA95806.1| 1938|Caenorhabditis elegans Hypothetical pr...    29   2.0  
X08065-1|CAA30854.1| 1938|Caenorhabditis elegans myosin 1 protein.     29   2.0  
M37232-1|AAA28119.1|  251|Caenorhabditis elegans myosin I protein.     29   2.0  
Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical p...    28   3.4  
Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical pr...    28   3.4  
U70856-1|AAB09165.1|  327|Caenorhabditis elegans Hypothetical pr...    28   3.4  
U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical pr...    28   3.4  
J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy ch...    28   3.4  
AF016450-2|AAB65983.1|  545|Caenorhabditis elegans Hypothetical ...    28   3.4  
Z77659-5|CAB01168.1|  953|Caenorhabditis elegans Hypothetical pr...    27   6.0  
Z74028-3|CAA98425.1| 1908|Caenorhabditis elegans Hypothetical pr...    27   8.0  
U41995-8|AAN84829.1|  350|Caenorhabditis elegans Hypothetical pr...    27   8.0  
U41995-7|AAP68946.1|  405|Caenorhabditis elegans Hypothetical pr...    27   8.0  

>AL032632-9|CAA21588.2| 1464|Caenorhabditis elegans Hypothetical
           protein Y11D7A.14 protein.
          Length = 1464

 Score = 31.5 bits (68), Expect = 0.37
 Identities = 15/41 (36%), Positives = 23/41 (56%)
 Frame = +1

Query: 103 ECVKESGVSTEVINAAKTGQNSEDKAFKKFVLCFFNKSAIL 225
           +CV  SGV  E +  A+T  NS    F KF+   F++++ L
Sbjct: 203 DCVVTSGVLLEAMGNARTTHNSNSSRFGKFIRIEFDENSKL 243


>Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical
           protein T18D3.4 protein.
          Length = 1947

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 15/50 (30%), Positives = 23/50 (46%)
 Frame = +1

Query: 64  TETQKEKAKQYTSECVKESGVSTEVINAAKTGQNSEDKAFKKFVLCFFNK 213
           TE  K K K    + + ++    E    AKT +N+    F KF+   F+K
Sbjct: 209 TEEDKNKKKVTLEDQIVQTNPVLEAFGNAKTVRNNNSSRFGKFIRIHFSK 258


>Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical
           protein T18D3.4 protein.
          Length = 1947

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 15/50 (30%), Positives = 23/50 (46%)
 Frame = +1

Query: 64  TETQKEKAKQYTSECVKESGVSTEVINAAKTGQNSEDKAFKKFVLCFFNK 213
           TE  K K K    + + ++    E    AKT +N+    F KF+   F+K
Sbjct: 209 TEEDKNKKKVTLEDQIVQTNPVLEAFGNAKTVRNNNSSRFGKFIRIHFSK 258


>X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy chain
           2 protein.
          Length = 1947

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 15/50 (30%), Positives = 23/50 (46%)
 Frame = +1

Query: 64  TETQKEKAKQYTSECVKESGVSTEVINAAKTGQNSEDKAFKKFVLCFFNK 213
           TE  K K K    + + ++    E    AKT +N+    F KF+   F+K
Sbjct: 209 TEEDKNKKKVTLEDQIVQTNPVLEAFGNAKTVRNNNSSRFGKFIRIHFSK 258


>M37233-1|AAA28121.1|  260|Caenorhabditis elegans myosin II protein.
          Length = 260

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 15/50 (30%), Positives = 23/50 (46%)
 Frame = +1

Query: 64  TETQKEKAKQYTSECVKESGVSTEVINAAKTGQNSEDKAFKKFVLCFFNK 213
           TE  K K K    + + ++    E    AKT +N+    F KF+   F+K
Sbjct: 98  TEEDKNKKKVTLEDQIVQTNPVLEAFGNAKTVRNNNSSRFGKFIRIHFSK 147


>Z71266-12|CAA95848.1| 1938|Caenorhabditis elegans Hypothetical
           protein R06C7.10 protein.
          Length = 1938

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
 Frame = +1

Query: 76  KEKAKQYTSEC-VKESGVSTEVINAAKTGQNSEDKAFKKFVLCFFNKSAILNS 231
           KE  K+ T E  + ++    E    AKT +N+    F KF+   FNK   L S
Sbjct: 206 KEGEKEVTLEDQIVQTNPVLEAFGNAKTVRNNNSSRFGKFIRIHFNKHGTLAS 258


>Z71261-8|CAA95806.1| 1938|Caenorhabditis elegans Hypothetical
           protein R06C7.10 protein.
          Length = 1938

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
 Frame = +1

Query: 76  KEKAKQYTSEC-VKESGVSTEVINAAKTGQNSEDKAFKKFVLCFFNKSAILNS 231
           KE  K+ T E  + ++    E    AKT +N+    F KF+   FNK   L S
Sbjct: 206 KEGEKEVTLEDQIVQTNPVLEAFGNAKTVRNNNSSRFGKFIRIHFNKHGTLAS 258


>X08065-1|CAA30854.1| 1938|Caenorhabditis elegans myosin 1 protein.
          Length = 1938

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
 Frame = +1

Query: 76  KEKAKQYTSEC-VKESGVSTEVINAAKTGQNSEDKAFKKFVLCFFNKSAILNS 231
           KE  K+ T E  + ++    E    AKT +N+    F KF+   FNK   L S
Sbjct: 206 KEGEKEVTLEDQIVQTNPVLEAFGNAKTVRNNNSSRFGKFIRIHFNKHGTLAS 258


>M37232-1|AAA28119.1|  251|Caenorhabditis elegans myosin I protein.
          Length = 251

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
 Frame = +1

Query: 76  KEKAKQYTSEC-VKESGVSTEVINAAKTGQNSEDKAFKKFVLCFFNKSAILNS 231
           KE  K+ T E  + ++    E    AKT +N+    F KF+   FNK   L S
Sbjct: 92  KEGEKEVTLEDQIVQTNPVLEAFGNAKTVRNNNSSRFGKFIRIHFNKHGTLAS 144


>Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical
           protein F11C3.3 protein.
          Length = 1963

 Score = 28.3 bits (60), Expect = 3.4
 Identities = 16/55 (29%), Positives = 23/55 (41%)
 Frame = +1

Query: 67  ETQKEKAKQYTSECVKESGVSTEVINAAKTGQNSEDKAFKKFVLCFFNKSAILNS 231
           E    K K    + + ++    E    AKT +N+    F KF+   FNK   L S
Sbjct: 204 EVDPNKKKVTLEDQIVQTNPVLEAFGNAKTVRNNNSSRFGKFIRIHFNKHGRLAS 258


>Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical
           protein F11C3.3 protein.
          Length = 1963

 Score = 28.3 bits (60), Expect = 3.4
 Identities = 16/55 (29%), Positives = 23/55 (41%)
 Frame = +1

Query: 67  ETQKEKAKQYTSECVKESGVSTEVINAAKTGQNSEDKAFKKFVLCFFNKSAILNS 231
           E    K K    + + ++    E    AKT +N+    F KF+   FNK   L S
Sbjct: 204 EVDPNKKKVTLEDQIVQTNPVLEAFGNAKTVRNNNSSRFGKFIRIHFNKHGRLAS 258


>U70856-1|AAB09165.1|  327|Caenorhabditis elegans Hypothetical
           protein F57F4.2 protein.
          Length = 327

 Score = 28.3 bits (60), Expect = 3.4
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = -1

Query: 198 KHEFLKSFIFGVLSSLRCIYHF 133
           K+EFLKS I   L +L C+ HF
Sbjct: 231 KNEFLKSHIHSKLRNLMCMLHF 252


>U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical
           protein F58G4.1 protein.
          Length = 1974

 Score = 28.3 bits (60), Expect = 3.4
 Identities = 13/48 (27%), Positives = 25/48 (52%)
 Frame = +1

Query: 67  ETQKEKAKQYTSECVKESGVSTEVINAAKTGQNSEDKAFKKFVLCFFN 210
           +++K+KA+    + + ++    E    AKT +N+    F KF+   FN
Sbjct: 204 KSKKDKAQVSLEDQIVQTNPVLEAFGNAKTVRNNNSSRFGKFIRIHFN 251


>J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy chain
           protein.
          Length = 1966

 Score = 28.3 bits (60), Expect = 3.4
 Identities = 16/55 (29%), Positives = 23/55 (41%)
 Frame = +1

Query: 67  ETQKEKAKQYTSECVKESGVSTEVINAAKTGQNSEDKAFKKFVLCFFNKSAILNS 231
           E    K K    + + ++    E    AKT +N+    F KF+   FNK   L S
Sbjct: 207 EVDPNKKKVTLEDQIVQTNPVLEAFGNAKTVRNNNSSRFGKFIRIHFNKHGRLAS 261


>AF016450-2|AAB65983.1|  545|Caenorhabditis elegans Hypothetical
           protein B0238.1 protein.
          Length = 545

 Score = 28.3 bits (60), Expect = 3.4
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +2

Query: 278 VNKSEAQSVLEQCKDKTGQDAADKAFEIFQCYY 376
           V K   ++ LE  +DK+G+    K  EIF  YY
Sbjct: 367 VVKKAVEAYLENIEDKSGEKIGKKLVEIFGDYY 399


>Z77659-5|CAB01168.1|  953|Caenorhabditis elegans Hypothetical
           protein F23B12.7 protein.
          Length = 953

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = +2

Query: 278 VNKSEAQSVLEQCKDKTGQDAA 343
           +N SE Q +LE+ KD+  QDAA
Sbjct: 118 MNASEIQKLLEEGKDEMAQDAA 139


>Z74028-3|CAA98425.1| 1908|Caenorhabditis elegans Hypothetical
           protein C14C10.5 protein.
          Length = 1908

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 18/42 (42%), Positives = 20/42 (47%)
 Frame = +1

Query: 118 SGVSTEVINAAKTGQNSEDKAFKKFVLCFFNKSAILNSDGTL 243
           S  ST    AAKTG N ED+ F +  L  F K    NS   L
Sbjct: 611 SSTSTHGSIAAKTGNNIEDQIFHRGTLSVF-KGICRNSSTEL 651


>U41995-8|AAN84829.1|  350|Caenorhabditis elegans Hypothetical
           protein E02C12.8a protein.
          Length = 350

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 15/60 (25%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
 Frame = +2

Query: 203 FSTNPQS*TQM-VH*TWMCARKLPPGVNKSEAQSVLEQCKDKTGQDAADKAFEIFQCYYK 379
           FS +PQ+  ++     W C  ++PPG++ +    +L  C   +GQ+  ++  E+ + Y++
Sbjct: 267 FSLDPQNKLKLEAIIDWQCVSRMPPGLDTAR---LLLGC--LSGQERRERGTELLKVYHE 321


>U41995-7|AAP68946.1|  405|Caenorhabditis elegans Hypothetical
           protein E02C12.8c protein.
          Length = 405

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 15/60 (25%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
 Frame = +2

Query: 203 FSTNPQS*TQM-VH*TWMCARKLPPGVNKSEAQSVLEQCKDKTGQDAADKAFEIFQCYYK 379
           FS +PQ+  ++     W C  ++PPG++ +    +L  C   +GQ+  ++  E+ + Y++
Sbjct: 267 FSLDPQNKLKLEAIIDWQCVSRMPPGLDTAR---LLLGC--LSGQERRERGTELLKVYHE 321


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,804,137
Number of Sequences: 27780
Number of extensions: 206109
Number of successful extensions: 581
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 565
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 581
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)