Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30703
(662 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY122220-1|AAM52732.1| 273|Drosophila melanogaster LP11234p pro... 133 2e-31
AE014134-937|AAN10546.1| 273|Drosophila melanogaster CG6957-PB,... 133 2e-31
AE014134-936|AAF52263.1| 273|Drosophila melanogaster CG6957-PA,... 133 2e-31
AY119005-1|AAM50865.1| 701|Drosophila melanogaster LP03332p pro... 29 5.6
AE014296-2095|AAF49958.1| 701|Drosophila melanogaster CG6806-PA... 29 5.6
>AY122220-1|AAM52732.1| 273|Drosophila melanogaster LP11234p
protein.
Length = 273
Score = 133 bits (321), Expect = 2e-31
Identities = 59/100 (59%), Positives = 67/100 (67%)
Frame = +3
Query: 255 FAPGPGRHFVXXXXXXXXXXXMYKRLIEFHKEGKLSFKYVTTFNMDEYVGLPRDHPESYH 434
F P R+FV MYK LIEFHK+GK+SF+YV TFNMDEYVGL RDH ESYH
Sbjct: 27 FQPSADRYFVLGLPTGSTPLGMYKELIEFHKQGKVSFQYVKTFNMDEYVGLARDHHESYH 86
Query: 435 YYMWNEFFKHIDIEPSNAHVLDGNAPI*CSSVNALRNSYR 554
Y+MWN FFKHIDIEP N H+LDGNA + N + R
Sbjct: 87 YFMWNNFFKHIDIEPKNVHILDGNAADLVAECNKFEDQIR 126
Score = 90.2 bits (214), Expect = 2e-18
Identities = 42/51 (82%), Positives = 45/51 (88%)
Frame = +2
Query: 509 SDLVLECQRFEKLIQEAGGVHLFIGGIGPDRHIAFNEPGSSLVSRTRVKTL 661
+DLV EC +FE I+EAGGV LFIGGIGPD HIAFNEPGSSLVSRTRVKTL
Sbjct: 112 ADLVAECNKFEDQIREAGGVELFIGGIGPDGHIAFNEPGSSLVSRTRVKTL 162
Score = 32.3 bits (70), Expect = 0.61
Identities = 13/24 (54%), Positives = 19/24 (79%)
Frame = +1
Query: 178 MRLIILEYASIVADWAARFVLQRI 249
MRL+ILE + V WAA++V++RI
Sbjct: 1 MRLVILETSDSVGKWAAKYVMKRI 24
>AE014134-937|AAN10546.1| 273|Drosophila melanogaster CG6957-PB,
isoform B protein.
Length = 273
Score = 133 bits (321), Expect = 2e-31
Identities = 59/100 (59%), Positives = 67/100 (67%)
Frame = +3
Query: 255 FAPGPGRHFVXXXXXXXXXXXMYKRLIEFHKEGKLSFKYVTTFNMDEYVGLPRDHPESYH 434
F P R+FV MYK LIEFHK+GK+SF+YV TFNMDEYVGL RDH ESYH
Sbjct: 27 FQPSADRYFVLGLPTGSTPLGMYKELIEFHKQGKVSFQYVKTFNMDEYVGLARDHHESYH 86
Query: 435 YYMWNEFFKHIDIEPSNAHVLDGNAPI*CSSVNALRNSYR 554
Y+MWN FFKHIDIEP N H+LDGNA + N + R
Sbjct: 87 YFMWNNFFKHIDIEPKNVHILDGNAADLVAECNKFEDQIR 126
Score = 90.2 bits (214), Expect = 2e-18
Identities = 42/51 (82%), Positives = 45/51 (88%)
Frame = +2
Query: 509 SDLVLECQRFEKLIQEAGGVHLFIGGIGPDRHIAFNEPGSSLVSRTRVKTL 661
+DLV EC +FE I+EAGGV LFIGGIGPD HIAFNEPGSSLVSRTRVKTL
Sbjct: 112 ADLVAECNKFEDQIREAGGVELFIGGIGPDGHIAFNEPGSSLVSRTRVKTL 162
Score = 32.3 bits (70), Expect = 0.61
Identities = 13/24 (54%), Positives = 19/24 (79%)
Frame = +1
Query: 178 MRLIILEYASIVADWAARFVLQRI 249
MRL+ILE + V WAA++V++RI
Sbjct: 1 MRLVILETSDSVGKWAAKYVMKRI 24
>AE014134-936|AAF52263.1| 273|Drosophila melanogaster CG6957-PA,
isoform A protein.
Length = 273
Score = 133 bits (321), Expect = 2e-31
Identities = 59/100 (59%), Positives = 67/100 (67%)
Frame = +3
Query: 255 FAPGPGRHFVXXXXXXXXXXXMYKRLIEFHKEGKLSFKYVTTFNMDEYVGLPRDHPESYH 434
F P R+FV MYK LIEFHK+GK+SF+YV TFNMDEYVGL RDH ESYH
Sbjct: 27 FQPSADRYFVLGLPTGSTPLGMYKELIEFHKQGKVSFQYVKTFNMDEYVGLARDHHESYH 86
Query: 435 YYMWNEFFKHIDIEPSNAHVLDGNAPI*CSSVNALRNSYR 554
Y+MWN FFKHIDIEP N H+LDGNA + N + R
Sbjct: 87 YFMWNNFFKHIDIEPKNVHILDGNAADLVAECNKFEDQIR 126
Score = 90.2 bits (214), Expect = 2e-18
Identities = 42/51 (82%), Positives = 45/51 (88%)
Frame = +2
Query: 509 SDLVLECQRFEKLIQEAGGVHLFIGGIGPDRHIAFNEPGSSLVSRTRVKTL 661
+DLV EC +FE I+EAGGV LFIGGIGPD HIAFNEPGSSLVSRTRVKTL
Sbjct: 112 ADLVAECNKFEDQIREAGGVELFIGGIGPDGHIAFNEPGSSLVSRTRVKTL 162
Score = 32.3 bits (70), Expect = 0.61
Identities = 13/24 (54%), Positives = 19/24 (79%)
Frame = +1
Query: 178 MRLIILEYASIVADWAARFVLQRI 249
MRL+ILE + V WAA++V++RI
Sbjct: 1 MRLVILETSDSVGKWAAKYVMKRI 24
>AY119005-1|AAM50865.1| 701|Drosophila melanogaster LP03332p
protein.
Length = 701
Score = 29.1 bits (62), Expect = 5.6
Identities = 17/67 (25%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Frame = +3
Query: 384 NMDEYVGLPRDHPESYHYYMWNEFFKHID-IEPSNAHVLD---GNAPI*CSSVNALRNSY 551
N+ Y G+P+ H E++H + ++HI+ +E V+D N ++N L N
Sbjct: 298 NLRTYYGVPQWHRENHHSFYHEHNYEHIEHVEMYTQRVMDWIHKNEKFDVETINVLGNII 357
Query: 552 RRLAECI 572
+ A+ +
Sbjct: 358 QGNADSV 364
>AE014296-2095|AAF49958.1| 701|Drosophila melanogaster CG6806-PA
protein.
Length = 701
Score = 29.1 bits (62), Expect = 5.6
Identities = 17/67 (25%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Frame = +3
Query: 384 NMDEYVGLPRDHPESYHYYMWNEFFKHID-IEPSNAHVLD---GNAPI*CSSVNALRNSY 551
N+ Y G+P+ H E++H + ++HI+ +E V+D N ++N L N
Sbjct: 298 NLRTYYGVPQWHRENHHSFYHEHNYEHIEHVEMYTQRVMDWIHKNEKFDVETINVLGNII 357
Query: 552 RRLAECI 572
+ A+ +
Sbjct: 358 QGNADSV 364
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,387,022
Number of Sequences: 53049
Number of extensions: 674967
Number of successful extensions: 1831
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1743
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1831
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2848092300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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