Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30703
(662 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81113-3|CAB03280.1| 267|Caenorhabditis elegans Hypothetical pr... 103 1e-22
U39655-2|AAY86240.1| 152|Caenorhabditis elegans Hypothetical pr... 28 5.1
Z80789-4|CAC35816.1| 350|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z69788-9|CAC35811.1| 350|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z69788-6|CAD44118.1| 324|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z69788-5|CAD44117.1| 314|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z69788-4|CAA93647.1| 341|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z69788-3|CAA93648.1| 300|Caenorhabditis elegans Hypothetical pr... 28 6.8
U23515-4|AAU87816.1| 333|Caenorhabditis elegans Hypothetical pr... 27 9.0
>Z81113-3|CAB03280.1| 267|Caenorhabditis elegans Hypothetical
protein T03F6.3 protein.
Length = 267
Score = 103 bits (246), Expect = 1e-22
Identities = 44/79 (55%), Positives = 56/79 (70%)
Frame = +3
Query: 270 GRHFVXXXXXXXXXXXMYKRLIEFHKEGKLSFKYVTTFNMDEYVGLPRDHPESYHYYMWN 449
G++ V MYK+LIEF+ G +SF+ V TFNMDEYV LPRDH ESYH +M++
Sbjct: 31 GKYLVLGLPTGSTPLGMYKKLIEFYNAGVISFEKVKTFNMDEYVDLPRDHTESYHSFMFD 90
Query: 450 EFFKHIDIEPSNAHVLDGN 506
FF+HIDI P+N H+LDGN
Sbjct: 91 NFFRHIDINPANIHILDGN 109
Score = 81.4 bits (192), Expect = 5e-16
Identities = 35/51 (68%), Positives = 43/51 (84%)
Frame = +2
Query: 509 SDLVLECQRFEKLIQEAGGVHLFIGGIGPDRHIAFNEPGSSLVSRTRVKTL 661
SD EC+ +E+ I+E+GG+ LF+GGIGPD HIAFNEPGSSL SRTR+KTL
Sbjct: 111 SDHEKECEEYERKIKESGGIDLFVGGIGPDGHIAFNEPGSSLASRTRIKTL 161
Score = 27.5 bits (58), Expect = 9.0
Identities = 13/27 (48%), Positives = 20/27 (74%)
Frame = +1
Query: 178 MRLIILEYASIVADWAARFVLQRITHS 258
M+LII E A VA++AAR+V+ +I +
Sbjct: 1 MKLIIEENADKVAEFAARYVVTKINEA 27
>U39655-2|AAY86240.1| 152|Caenorhabditis elegans Hypothetical
protein C46F4.3 protein.
Length = 152
Score = 28.3 bits (60), Expect = 5.1
Identities = 17/44 (38%), Positives = 21/44 (47%)
Frame = -2
Query: 397 YSSMLKVVTYLKDNFPSLWNSINRLYMPRGVPPVGRPSTKCLPG 266
Y S +K L D+ P +I P G V RPSTKC+ G
Sbjct: 68 YDSKVKESESLHDDKPENLPAIGLAGHPCGQGGVCRPSTKCIEG 111
>Z80789-4|CAC35816.1| 350|Caenorhabditis elegans Hypothetical
protein F09A5.4c protein.
Length = 350
Score = 27.9 bits (59), Expect = 6.8
Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = -3
Query: 345 CGTLSTVCTCRGASH-RWAGPARSVFPDPERMR 250
CGTLS VCT + H + G +++++ D R
Sbjct: 159 CGTLSEVCTQQSCPHMSFPGTSKAIYTDERGKR 191
>Z69788-9|CAC35811.1| 350|Caenorhabditis elegans Hypothetical
protein F09A5.4c protein.
Length = 350
Score = 27.9 bits (59), Expect = 6.8
Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = -3
Query: 345 CGTLSTVCTCRGASH-RWAGPARSVFPDPERMR 250
CGTLS VCT + H + G +++++ D R
Sbjct: 159 CGTLSEVCTQQSCPHMSFPGTSKAIYTDERGKR 191
>Z69788-6|CAD44118.1| 324|Caenorhabditis elegans Hypothetical
protein F09A5.4e protein.
Length = 324
Score = 27.9 bits (59), Expect = 6.8
Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = -3
Query: 345 CGTLSTVCTCRGASH-RWAGPARSVFPDPERMR 250
CGTLS VCT + H + G +++++ D R
Sbjct: 133 CGTLSEVCTQQSCPHMSFPGTSKAIYTDERGKR 165
>Z69788-5|CAD44117.1| 314|Caenorhabditis elegans Hypothetical
protein F09A5.4d protein.
Length = 314
Score = 27.9 bits (59), Expect = 6.8
Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = -3
Query: 345 CGTLSTVCTCRGASH-RWAGPARSVFPDPERMR 250
CGTLS VCT + H + G +++++ D R
Sbjct: 123 CGTLSEVCTQQSCPHMSFPGTSKAIYTDERGKR 155
>Z69788-4|CAA93647.1| 341|Caenorhabditis elegans Hypothetical
protein F09A5.4b protein.
Length = 341
Score = 27.9 bits (59), Expect = 6.8
Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = -3
Query: 345 CGTLSTVCTCRGASH-RWAGPARSVFPDPERMR 250
CGTLS VCT + H + G +++++ D R
Sbjct: 150 CGTLSEVCTQQSCPHMSFPGTSKAIYTDERGKR 182
>Z69788-3|CAA93648.1| 300|Caenorhabditis elegans Hypothetical
protein F09A5.4a protein.
Length = 300
Score = 27.9 bits (59), Expect = 6.8
Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = -3
Query: 345 CGTLSTVCTCRGASH-RWAGPARSVFPDPERMR 250
CGTLS VCT + H + G +++++ D R
Sbjct: 109 CGTLSEVCTQQSCPHMSFPGTSKAIYTDERGKR 141
>U23515-4|AAU87816.1| 333|Caenorhabditis elegans Hypothetical
protein R144.12 protein.
Length = 333
Score = 27.5 bits (58), Expect = 9.0
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = -2
Query: 409 GRPTYSSMLKVVTYLKDNFPSLWNSINRLYMPRGV 305
G+ Y MLK ++D PSLWN I RG+
Sbjct: 270 GKEYYWKMLKRNRIMRDIKPSLWNQITATGDIRGI 304
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,339,697
Number of Sequences: 27780
Number of extensions: 337826
Number of successful extensions: 980
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 928
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 980
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1486926498
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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