Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30702
(661 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_37955| Best HMM Match : 14-3-3 (HMM E-Value=6.5861e-44) 111 6e-25
SB_36368| Best HMM Match : 14-3-3 (HMM E-Value=0) 87 9e-18
SB_34217| Best HMM Match : No HMM Matches (HMM E-Value=.) 84 8e-17
SB_34219| Best HMM Match : No HMM Matches (HMM E-Value=.) 84 1e-16
SB_34218| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 8e-09
SB_29594| Best HMM Match : Pox_A_type_inc (HMM E-Value=8.4e-06) 30 1.5
SB_11412| Best HMM Match : APG6 (HMM E-Value=2.52234e-44) 29 2.5
SB_26483| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_20371| Best HMM Match : U-box (HMM E-Value=0.075) 29 2.5
SB_36640| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_7846| Best HMM Match : CoCoA (HMM E-Value=0.00016) 29 3.4
SB_53556| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_33968| Best HMM Match : Transformer (HMM E-Value=5.1) 28 5.9
SB_2776| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
SB_29939| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
SB_47663| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
>SB_37955| Best HMM Match : 14-3-3 (HMM E-Value=6.5861e-44)
Length = 251
Score = 111 bits (266), Expect = 6e-25
Identities = 54/79 (68%), Positives = 67/79 (84%)
Frame = +3
Query: 6 MSEREDNVYKAKLADQAERYDEMVEAMKNVASRNVSDNELTVEERNLLSVAYKNVIGARR 185
M+++E++VY AKLA+QAERYD+MV +MK VA EL+ E+RNLLSVAYKNVIGARR
Sbjct: 1 MADKEEHVYMAKLAEQAERYDDMVNSMKEVAKMGT---ELSTEDRNLLSVAYKNVIGARR 57
Query: 186 ASWRIISSIEQKEETKGAE 242
ASWRII+SIEQKEE+KG +
Sbjct: 58 ASWRIITSIEQKEESKGED 76
Score = 58.8 bits (136), Expect = 4e-09
Identities = 26/47 (55%), Positives = 37/47 (78%)
Frame = +2
Query: 245 QIELIRAYRSQVEKELRDICSDILGVLDKYLIPSSQTEESKVFYYKM 385
++E+IR YR +E+EL+ IC +IL +LD LI +SQ+EESKVFY K+
Sbjct: 79 KLEMIRNYRKTIEEELKTICGEILSLLDDSLIKNSQSEESKVFYNKI 125
>SB_36368| Best HMM Match : 14-3-3 (HMM E-Value=0)
Length = 248
Score = 87.4 bits (207), Expect = 9e-18
Identities = 43/69 (62%), Positives = 54/69 (78%)
Frame = +3
Query: 15 REDNVYKAKLADQAERYDEMVEAMKNVASRNVSDNELTVEERNLLSVAYKNVIGARRASW 194
RE+ ++ AK+A+QAERYD+MV AM V N+ EERNLLSVAYKNV+GARR+SW
Sbjct: 11 REELIHLAKMAEQAERYDDMVNAMSAVTKEGKPLND---EERNLLSVAYKNVVGARRSSW 67
Query: 195 RIISSIEQK 221
R+ISS+EQK
Sbjct: 68 RVISSMEQK 76
Score = 85.0 bits (201), Expect = 5e-17
Identities = 39/56 (69%), Positives = 43/56 (76%)
Frame = +1
Query: 493 DRTAPPHPIRLGLALNFSVFYYEILNSPDRACRLGKAAFYDAIAELDTLSEESYKD 660
+ +P HPIRLGLALNFSVFYYEI N P AC+L K AF DAIA LD L +ESYKD
Sbjct: 166 EELSPSHPIRLGLALNFSVFYYEIENKPPEACKLAKEAFDDAIAVLDNLKDESYKD 221
Score = 79.8 bits (188), Expect = 2e-15
Identities = 38/79 (48%), Positives = 50/79 (63%), Gaps = 3/79 (3%)
Frame = +2
Query: 254 LIRAYRSQVEKELRDICSDILGVLDKYLIPSSQTE---ESKVFYYKMKGDYHRYLAEFAT 424
L + YR + EL C+++L +L+ YL+ Q + E+KVFY KM+GDYHRYL E A
Sbjct: 84 LTKKYREDITNELNGKCAEVLDILENYLLKDGQDDINTEAKVFYLKMRGDYHRYLVEVAE 143
Query: 425 GNDRKEAAENSLVAYKAAS 481
G+ RKE E S AYK AS
Sbjct: 144 GDSRKENIEKSREAYKDAS 162
>SB_34217| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 219
Score = 84.2 bits (199), Expect = 8e-17
Identities = 40/72 (55%), Positives = 55/72 (76%)
Frame = +3
Query: 6 MSEREDNVYKAKLADQAERYDEMVEAMKNVASRNVSDNELTVEERNLLSVAYKNVIGARR 185
M RE +Y AKL++Q +RYDEM + MK V+ + +L+ EERNLLSV+YKN++G RR
Sbjct: 81 MVVRETLIYNAKLSEQCDRYDEMAKIMKEVSEKYP---KLSKEERNLLSVSYKNIVGQRR 137
Query: 186 ASWRIISSIEQK 221
+SWR+ISSIE+K
Sbjct: 138 SSWRVISSIEEK 149
Score = 84.2 bits (199), Expect = 8e-17
Identities = 32/64 (50%), Positives = 54/64 (84%)
Frame = +2
Query: 248 IELIRAYRSQVEKELRDICSDILGVLDKYLIPSSQTEESKVFYYKMKGDYHRYLAEFATG 427
+ +++ Y++ +EKEL+D+C ++LG+L++ LIP ++ EE+KVFY+K+KGDY+RYLAEF+ G
Sbjct: 156 LAIVKKYKACIEKELKDLCKEVLGILER-LIPGAEDEENKVFYFKLKGDYYRYLAEFSHG 214
Query: 428 NDRK 439
+ K
Sbjct: 215 QEHK 218
>SB_34219| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 309
Score = 83.8 bits (198), Expect = 1e-16
Identities = 50/112 (44%), Positives = 64/112 (57%), Gaps = 2/112 (1%)
Frame = +1
Query: 331 VPHPQLTDRRIKSFLLQNEGRLPPVPGRVR--DRQRPQGGCRELAGRVQGSLRHRHDRTA 504
+P+ Q T+ ++ F L+ +G G V DR+R A + + +
Sbjct: 85 IPNAQSTESKV--FYLKMKGDYYRYEGEVAGADRRREVVQKAMKAYSEAQEIAEKDPKLP 142
Query: 505 PPHPIRLGLALNFSVFYYEILNSPDRACRLGKAAFYDAIAELDTLSEESYKD 660
P PIRLGLALNFSVFYYEI+ +AC L K AF DAIAELDTLSE+ YKD
Sbjct: 143 PTDPIRLGLALNFSVFYYEIVEDSKQACDLAKKAFDDAIAELDTLSEDQYKD 194
Score = 82.2 bits (194), Expect = 3e-16
Identities = 37/93 (39%), Positives = 59/93 (63%)
Frame = +2
Query: 212 RTEGRDKRRRGQIELIRAYRSQVEKELRDICSDILGVLDKYLIPSSQTEESKVFYYKMKG 391
+ EG +++++ YR +E EL ++C +L +L+ LIP++Q+ ESKVFY KMKG
Sbjct: 47 KLEGSERKKQNT----ETYRQTIENELNEVCETVLKLLESKLIPNAQSTESKVFYLKMKG 102
Query: 392 DYHRYLAEFATGNDRKEAAENSLVAYKAASDIA 490
DY+RY E A + R+E + ++ AY A +IA
Sbjct: 103 DYYRYEGEVAGADRRREVVQKAMKAYSEAQEIA 135
Score = 79.0 bits (186), Expect = 3e-15
Identities = 36/55 (65%), Positives = 44/55 (80%)
Frame = +1
Query: 496 RTAPPHPIRLGLALNFSVFYYEILNSPDRACRLGKAAFYDAIAELDTLSEESYKD 660
+ AP PIRLGLALNFSVF+YEI + + AC+L K AF DAIAELD+L+E+ YKD
Sbjct: 229 KLAPTDPIRLGLALNFSVFHYEIQENQEEACKLAKQAFDDAIAELDSLNEDQYKD 283
Score = 63.7 bits (148), Expect = 1e-10
Identities = 36/59 (61%), Positives = 44/59 (74%)
Frame = +3
Query: 72 MVEAMKNVASRNVSDNELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEETKGAEDK 248
M +AMK +S+ L EERNLLSVAYKNV+GA+R+SWR+ISSIEQK E G+E K
Sbjct: 1 MAKAMKEATE--ISET-LEQEERNLLSVAYKNVVGAKRSSWRVISSIEQKLE--GSERK 54
>SB_34218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 607
Score = 57.6 bits (133), Expect = 8e-09
Identities = 29/61 (47%), Positives = 41/61 (67%)
Frame = +3
Query: 15 REDNVYKAKLADQAERYDEMVEAMKNVASRNVSDNELTVEERNLLSVAYKNVIGARRASW 194
R + V AKLA+Q ER+++++ MK N S N+ E RNLLSV YKNV+G++R +W
Sbjct: 190 RNELVQLAKLAEQTERFEDVILYMKKAIEINPSLNK---EHRNLLSVGYKNVVGSKRFAW 246
Query: 195 R 197
R
Sbjct: 247 R 247
>SB_29594| Best HMM Match : Pox_A_type_inc (HMM E-Value=8.4e-06)
Length = 1292
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/42 (33%), Positives = 26/42 (61%)
Frame = +3
Query: 12 EREDNVYKAKLADQAERYDEMVEAMKNVASRNVSDNELTVEE 137
ER + Y+ +L DQ+E++ E++K RN+ ++EL +E
Sbjct: 958 ERMELSYQRELQDQSEKHANEFESLKVQLCRNLENSELEKDE 999
>SB_11412| Best HMM Match : APG6 (HMM E-Value=2.52234e-44)
Length = 587
Score = 29.5 bits (63), Expect = 2.5
Identities = 21/70 (30%), Positives = 34/70 (48%)
Frame = +2
Query: 275 QVEKELRDICSDILGVLDKYLIPSSQTEESKVFYYKMKGDYHRYLAEFATGNDRKEAAEN 454
+VE+E D+ L K S Q EE++ YY +Y R L +F D K++ +N
Sbjct: 196 EVEQERHDVSE----ALKKEKEISKQLEEAEKAYYTEYCEYQRELLDF---EDEKQSVDN 248
Query: 455 SLVAYKAASD 484
++ +A D
Sbjct: 249 QMMYAQAQLD 258
>SB_26483| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1702
Score = 29.5 bits (63), Expect = 2.5
Identities = 18/68 (26%), Positives = 35/68 (51%)
Frame = +2
Query: 260 RAYRSQVEKELRDICSDILGVLDKYLIPSSQTEESKVFYYKMKGDYHRYLAEFATGNDRK 439
R ++ +EKE ++ +I+G ++L+ +TE K+ K D +++ + RK
Sbjct: 759 RLFKDLIEKEDKEKKREIIGFTIRHLVDKIRTERRKI---KRDLDKKKFMPPRRSTRKRK 815
Query: 440 EAAENSLV 463
AE +LV
Sbjct: 816 RDAEPNLV 823
>SB_20371| Best HMM Match : U-box (HMM E-Value=0.075)
Length = 515
Score = 29.5 bits (63), Expect = 2.5
Identities = 21/83 (25%), Positives = 39/83 (46%), Gaps = 3/83 (3%)
Frame = +3
Query: 6 MSEREDNVYKAKLADQAERYDEM---VEAMKNVASRNVSDNELTVEERNLLSVAYKNVIG 176
M + D V +AK A YD + ++ + + + D E +++LL+ +K ++G
Sbjct: 350 MDQWMDAVQQAK-AQFTREYDPAKSEIPDIETIFQKKIEDLESANNDKDLLN--HKKIVG 406
Query: 177 ARRASWRIISSIEQKEETKGAED 245
+ W++ EQ GAED
Sbjct: 407 FDKKIWKVHHEKEQMIGAGGAED 429
>SB_36640| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 283
Score = 29.1 bits (62), Expect = 3.4
Identities = 18/47 (38%), Positives = 20/47 (42%)
Frame = -2
Query: 150 TAGSSPPLSAHCRTRCVMLHSSSPPPFRHSAQPGQLTLLYTHYLPFP 10
TA S PP +A C T C + P P P T L H LP P
Sbjct: 40 TALSPPPATALCPTPC---YGPVPHPLLRPCVPPPATALVPHPLPRP 83
>SB_7846| Best HMM Match : CoCoA (HMM E-Value=0.00016)
Length = 1284
Score = 29.1 bits (62), Expect = 3.4
Identities = 19/78 (24%), Positives = 41/78 (52%)
Frame = +3
Query: 30 YKAKLADQAERYDEMVEAMKNVASRNVSDNELTVEERNLLSVAYKNVIGARRASWRIISS 209
YK K + + ++ +A ++ S N SDNE+ + RN +S + + R +S +
Sbjct: 1024 YKIKFIEWRKLQSQLQKARRSSPSVN-SDNEVCHDARNTISKLREEMEELRESSAAAQKA 1082
Query: 210 IEQKEETKGAEDKLN*SE 263
+EQ+++ + + ++N E
Sbjct: 1083 LEQEKQQRLEKLEMNNQE 1100
>SB_53556| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1524
Score = 28.7 bits (61), Expect = 4.4
Identities = 21/88 (23%), Positives = 42/88 (47%)
Frame = +2
Query: 209 HRTEGRDKRRRGQIELIRAYRSQVEKELRDICSDILGVLDKYLIPSSQTEESKVFYYKMK 388
++++ DK+ + E +R +EK+L++ ++I G+ D + E+ + +
Sbjct: 450 NKSDDDDKKIKDLNEKVRV----LEKQLKENDAEIQGLKDDNERLEDELEDLSTTIKRGR 505
Query: 389 GDYHRYLAEFATGNDRKEAAENSLVAYK 472
+Y R L E A D EA + + A K
Sbjct: 506 AEYERILKENAELKDENEALKAEIDALK 533
>SB_33968| Best HMM Match : Transformer (HMM E-Value=5.1)
Length = 471
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = +1
Query: 391 RLPPVPGRVRDRQRPQGGCRELAGRVQGSLRHRHDRTAPPHP 516
R P GR+R R + GC R + + R +PPHP
Sbjct: 144 RTPQETGRMRPYDRQRRGCIVRNHRPRDRQQSRRTARSPPHP 185
>SB_2776| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1792
Score = 28.3 bits (60), Expect = 5.9
Identities = 17/53 (32%), Positives = 29/53 (54%)
Frame = +3
Query: 3 TMSEREDNVYKAKLADQAERYDEMVEAMKNVASRNVSDNELTVEERNLLSVAY 161
T+SERE KA++ A E A ++A + ++NE +E R+L +A+
Sbjct: 788 TISEREAIANKARIRSGALTLSETGPAFVDLALKVPAENEEKLENRDLEEMAW 840
>SB_29939| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1122
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +3
Query: 21 DNVYKAKLADQAERYDEMVEAMKNVASRNVSDNELTVEERNLL 149
D VY+ L RY+E+V + N + +N TV +R ++
Sbjct: 80 DEVYRPYLTTDETRYNEVVFVVDNTVYQRYHNNTKTVTDRVII 122
>SB_47663| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1409
Score = 27.9 bits (59), Expect = 7.7
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +3
Query: 21 DNVYKAKLADQAERYDEMVEAMKNVASRNVSDNELTVEER 140
D VY+ L RY EMV + N + +N TV ++
Sbjct: 170 DEVYRPYLTTDETRYTEMVFVVDNTVYQRYQNNTKTVTDK 209
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,602,191
Number of Sequences: 59808
Number of extensions: 313401
Number of successful extensions: 1308
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1179
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1301
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1693527500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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