BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdV30702 (661 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_37955| Best HMM Match : 14-3-3 (HMM E-Value=6.5861e-44) 111 6e-25 SB_36368| Best HMM Match : 14-3-3 (HMM E-Value=0) 87 9e-18 SB_34217| Best HMM Match : No HMM Matches (HMM E-Value=.) 84 8e-17 SB_34219| Best HMM Match : No HMM Matches (HMM E-Value=.) 84 1e-16 SB_34218| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 8e-09 SB_29594| Best HMM Match : Pox_A_type_inc (HMM E-Value=8.4e-06) 30 1.5 SB_11412| Best HMM Match : APG6 (HMM E-Value=2.52234e-44) 29 2.5 SB_26483| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5 SB_20371| Best HMM Match : U-box (HMM E-Value=0.075) 29 2.5 SB_36640| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4 SB_7846| Best HMM Match : CoCoA (HMM E-Value=0.00016) 29 3.4 SB_53556| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4 SB_33968| Best HMM Match : Transformer (HMM E-Value=5.1) 28 5.9 SB_2776| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9 SB_29939| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9 SB_47663| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7 >SB_37955| Best HMM Match : 14-3-3 (HMM E-Value=6.5861e-44) Length = 251 Score = 111 bits (266), Expect = 6e-25 Identities = 54/79 (68%), Positives = 67/79 (84%) Frame = +3 Query: 6 MSEREDNVYKAKLADQAERYDEMVEAMKNVASRNVSDNELTVEERNLLSVAYKNVIGARR 185 M+++E++VY AKLA+QAERYD+MV +MK VA EL+ E+RNLLSVAYKNVIGARR Sbjct: 1 MADKEEHVYMAKLAEQAERYDDMVNSMKEVAKMGT---ELSTEDRNLLSVAYKNVIGARR 57 Query: 186 ASWRIISSIEQKEETKGAE 242 ASWRII+SIEQKEE+KG + Sbjct: 58 ASWRIITSIEQKEESKGED 76 Score = 58.8 bits (136), Expect = 4e-09 Identities = 26/47 (55%), Positives = 37/47 (78%) Frame = +2 Query: 245 QIELIRAYRSQVEKELRDICSDILGVLDKYLIPSSQTEESKVFYYKM 385 ++E+IR YR +E+EL+ IC +IL +LD LI +SQ+EESKVFY K+ Sbjct: 79 KLEMIRNYRKTIEEELKTICGEILSLLDDSLIKNSQSEESKVFYNKI 125 >SB_36368| Best HMM Match : 14-3-3 (HMM E-Value=0) Length = 248 Score = 87.4 bits (207), Expect = 9e-18 Identities = 43/69 (62%), Positives = 54/69 (78%) Frame = +3 Query: 15 REDNVYKAKLADQAERYDEMVEAMKNVASRNVSDNELTVEERNLLSVAYKNVIGARRASW 194 RE+ ++ AK+A+QAERYD+MV AM V N+ EERNLLSVAYKNV+GARR+SW Sbjct: 11 REELIHLAKMAEQAERYDDMVNAMSAVTKEGKPLND---EERNLLSVAYKNVVGARRSSW 67 Query: 195 RIISSIEQK 221 R+ISS+EQK Sbjct: 68 RVISSMEQK 76 Score = 85.0 bits (201), Expect = 5e-17 Identities = 39/56 (69%), Positives = 43/56 (76%) Frame = +1 Query: 493 DRTAPPHPIRLGLALNFSVFYYEILNSPDRACRLGKAAFYDAIAELDTLSEESYKD 660 + +P HPIRLGLALNFSVFYYEI N P AC+L K AF DAIA LD L +ESYKD Sbjct: 166 EELSPSHPIRLGLALNFSVFYYEIENKPPEACKLAKEAFDDAIAVLDNLKDESYKD 221 Score = 79.8 bits (188), Expect = 2e-15 Identities = 38/79 (48%), Positives = 50/79 (63%), Gaps = 3/79 (3%) Frame = +2 Query: 254 LIRAYRSQVEKELRDICSDILGVLDKYLIPSSQTE---ESKVFYYKMKGDYHRYLAEFAT 424 L + YR + EL C+++L +L+ YL+ Q + E+KVFY KM+GDYHRYL E A Sbjct: 84 LTKKYREDITNELNGKCAEVLDILENYLLKDGQDDINTEAKVFYLKMRGDYHRYLVEVAE 143 Query: 425 GNDRKEAAENSLVAYKAAS 481 G+ RKE E S AYK AS Sbjct: 144 GDSRKENIEKSREAYKDAS 162 >SB_34217| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 219 Score = 84.2 bits (199), Expect = 8e-17 Identities = 40/72 (55%), Positives = 55/72 (76%) Frame = +3 Query: 6 MSEREDNVYKAKLADQAERYDEMVEAMKNVASRNVSDNELTVEERNLLSVAYKNVIGARR 185 M RE +Y AKL++Q +RYDEM + MK V+ + +L+ EERNLLSV+YKN++G RR Sbjct: 81 MVVRETLIYNAKLSEQCDRYDEMAKIMKEVSEKYP---KLSKEERNLLSVSYKNIVGQRR 137 Query: 186 ASWRIISSIEQK 221 +SWR+ISSIE+K Sbjct: 138 SSWRVISSIEEK 149 Score = 84.2 bits (199), Expect = 8e-17 Identities = 32/64 (50%), Positives = 54/64 (84%) Frame = +2 Query: 248 IELIRAYRSQVEKELRDICSDILGVLDKYLIPSSQTEESKVFYYKMKGDYHRYLAEFATG 427 + +++ Y++ +EKEL+D+C ++LG+L++ LIP ++ EE+KVFY+K+KGDY+RYLAEF+ G Sbjct: 156 LAIVKKYKACIEKELKDLCKEVLGILER-LIPGAEDEENKVFYFKLKGDYYRYLAEFSHG 214 Query: 428 NDRK 439 + K Sbjct: 215 QEHK 218 >SB_34219| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 309 Score = 83.8 bits (198), Expect = 1e-16 Identities = 50/112 (44%), Positives = 64/112 (57%), Gaps = 2/112 (1%) Frame = +1 Query: 331 VPHPQLTDRRIKSFLLQNEGRLPPVPGRVR--DRQRPQGGCRELAGRVQGSLRHRHDRTA 504 +P+ Q T+ ++ F L+ +G G V DR+R A + + + Sbjct: 85 IPNAQSTESKV--FYLKMKGDYYRYEGEVAGADRRREVVQKAMKAYSEAQEIAEKDPKLP 142 Query: 505 PPHPIRLGLALNFSVFYYEILNSPDRACRLGKAAFYDAIAELDTLSEESYKD 660 P PIRLGLALNFSVFYYEI+ +AC L K AF DAIAELDTLSE+ YKD Sbjct: 143 PTDPIRLGLALNFSVFYYEIVEDSKQACDLAKKAFDDAIAELDTLSEDQYKD 194 Score = 82.2 bits (194), Expect = 3e-16 Identities = 37/93 (39%), Positives = 59/93 (63%) Frame = +2 Query: 212 RTEGRDKRRRGQIELIRAYRSQVEKELRDICSDILGVLDKYLIPSSQTEESKVFYYKMKG 391 + EG +++++ YR +E EL ++C +L +L+ LIP++Q+ ESKVFY KMKG Sbjct: 47 KLEGSERKKQNT----ETYRQTIENELNEVCETVLKLLESKLIPNAQSTESKVFYLKMKG 102 Query: 392 DYHRYLAEFATGNDRKEAAENSLVAYKAASDIA 490 DY+RY E A + R+E + ++ AY A +IA Sbjct: 103 DYYRYEGEVAGADRRREVVQKAMKAYSEAQEIA 135 Score = 79.0 bits (186), Expect = 3e-15 Identities = 36/55 (65%), Positives = 44/55 (80%) Frame = +1 Query: 496 RTAPPHPIRLGLALNFSVFYYEILNSPDRACRLGKAAFYDAIAELDTLSEESYKD 660 + AP PIRLGLALNFSVF+YEI + + AC+L K AF DAIAELD+L+E+ YKD Sbjct: 229 KLAPTDPIRLGLALNFSVFHYEIQENQEEACKLAKQAFDDAIAELDSLNEDQYKD 283 Score = 63.7 bits (148), Expect = 1e-10 Identities = 36/59 (61%), Positives = 44/59 (74%) Frame = +3 Query: 72 MVEAMKNVASRNVSDNELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEETKGAEDK 248 M +AMK +S+ L EERNLLSVAYKNV+GA+R+SWR+ISSIEQK E G+E K Sbjct: 1 MAKAMKEATE--ISET-LEQEERNLLSVAYKNVVGAKRSSWRVISSIEQKLE--GSERK 54 >SB_34218| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 607 Score = 57.6 bits (133), Expect = 8e-09 Identities = 29/61 (47%), Positives = 41/61 (67%) Frame = +3 Query: 15 REDNVYKAKLADQAERYDEMVEAMKNVASRNVSDNELTVEERNLLSVAYKNVIGARRASW 194 R + V AKLA+Q ER+++++ MK N S N+ E RNLLSV YKNV+G++R +W Sbjct: 190 RNELVQLAKLAEQTERFEDVILYMKKAIEINPSLNK---EHRNLLSVGYKNVVGSKRFAW 246 Query: 195 R 197 R Sbjct: 247 R 247 >SB_29594| Best HMM Match : Pox_A_type_inc (HMM E-Value=8.4e-06) Length = 1292 Score = 30.3 bits (65), Expect = 1.5 Identities = 14/42 (33%), Positives = 26/42 (61%) Frame = +3 Query: 12 EREDNVYKAKLADQAERYDEMVEAMKNVASRNVSDNELTVEE 137 ER + Y+ +L DQ+E++ E++K RN+ ++EL +E Sbjct: 958 ERMELSYQRELQDQSEKHANEFESLKVQLCRNLENSELEKDE 999 >SB_11412| Best HMM Match : APG6 (HMM E-Value=2.52234e-44) Length = 587 Score = 29.5 bits (63), Expect = 2.5 Identities = 21/70 (30%), Positives = 34/70 (48%) Frame = +2 Query: 275 QVEKELRDICSDILGVLDKYLIPSSQTEESKVFYYKMKGDYHRYLAEFATGNDRKEAAEN 454 +VE+E D+ L K S Q EE++ YY +Y R L +F D K++ +N Sbjct: 196 EVEQERHDVSE----ALKKEKEISKQLEEAEKAYYTEYCEYQRELLDF---EDEKQSVDN 248 Query: 455 SLVAYKAASD 484 ++ +A D Sbjct: 249 QMMYAQAQLD 258 >SB_26483| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1702 Score = 29.5 bits (63), Expect = 2.5 Identities = 18/68 (26%), Positives = 35/68 (51%) Frame = +2 Query: 260 RAYRSQVEKELRDICSDILGVLDKYLIPSSQTEESKVFYYKMKGDYHRYLAEFATGNDRK 439 R ++ +EKE ++ +I+G ++L+ +TE K+ K D +++ + RK Sbjct: 759 RLFKDLIEKEDKEKKREIIGFTIRHLVDKIRTERRKI---KRDLDKKKFMPPRRSTRKRK 815 Query: 440 EAAENSLV 463 AE +LV Sbjct: 816 RDAEPNLV 823 >SB_20371| Best HMM Match : U-box (HMM E-Value=0.075) Length = 515 Score = 29.5 bits (63), Expect = 2.5 Identities = 21/83 (25%), Positives = 39/83 (46%), Gaps = 3/83 (3%) Frame = +3 Query: 6 MSEREDNVYKAKLADQAERYDEM---VEAMKNVASRNVSDNELTVEERNLLSVAYKNVIG 176 M + D V +AK A YD + ++ + + + D E +++LL+ +K ++G Sbjct: 350 MDQWMDAVQQAK-AQFTREYDPAKSEIPDIETIFQKKIEDLESANNDKDLLN--HKKIVG 406 Query: 177 ARRASWRIISSIEQKEETKGAED 245 + W++ EQ GAED Sbjct: 407 FDKKIWKVHHEKEQMIGAGGAED 429 >SB_36640| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 283 Score = 29.1 bits (62), Expect = 3.4 Identities = 18/47 (38%), Positives = 20/47 (42%) Frame = -2 Query: 150 TAGSSPPLSAHCRTRCVMLHSSSPPPFRHSAQPGQLTLLYTHYLPFP 10 TA S PP +A C T C + P P P T L H LP P Sbjct: 40 TALSPPPATALCPTPC---YGPVPHPLLRPCVPPPATALVPHPLPRP 83 >SB_7846| Best HMM Match : CoCoA (HMM E-Value=0.00016) Length = 1284 Score = 29.1 bits (62), Expect = 3.4 Identities = 19/78 (24%), Positives = 41/78 (52%) Frame = +3 Query: 30 YKAKLADQAERYDEMVEAMKNVASRNVSDNELTVEERNLLSVAYKNVIGARRASWRIISS 209 YK K + + ++ +A ++ S N SDNE+ + RN +S + + R +S + Sbjct: 1024 YKIKFIEWRKLQSQLQKARRSSPSVN-SDNEVCHDARNTISKLREEMEELRESSAAAQKA 1082 Query: 210 IEQKEETKGAEDKLN*SE 263 +EQ+++ + + ++N E Sbjct: 1083 LEQEKQQRLEKLEMNNQE 1100 >SB_53556| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1524 Score = 28.7 bits (61), Expect = 4.4 Identities = 21/88 (23%), Positives = 42/88 (47%) Frame = +2 Query: 209 HRTEGRDKRRRGQIELIRAYRSQVEKELRDICSDILGVLDKYLIPSSQTEESKVFYYKMK 388 ++++ DK+ + E +R +EK+L++ ++I G+ D + E+ + + Sbjct: 450 NKSDDDDKKIKDLNEKVRV----LEKQLKENDAEIQGLKDDNERLEDELEDLSTTIKRGR 505 Query: 389 GDYHRYLAEFATGNDRKEAAENSLVAYK 472 +Y R L E A D EA + + A K Sbjct: 506 AEYERILKENAELKDENEALKAEIDALK 533 >SB_33968| Best HMM Match : Transformer (HMM E-Value=5.1) Length = 471 Score = 28.3 bits (60), Expect = 5.9 Identities = 14/42 (33%), Positives = 19/42 (45%) Frame = +1 Query: 391 RLPPVPGRVRDRQRPQGGCRELAGRVQGSLRHRHDRTAPPHP 516 R P GR+R R + GC R + + R +PPHP Sbjct: 144 RTPQETGRMRPYDRQRRGCIVRNHRPRDRQQSRRTARSPPHP 185 >SB_2776| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1792 Score = 28.3 bits (60), Expect = 5.9 Identities = 17/53 (32%), Positives = 29/53 (54%) Frame = +3 Query: 3 TMSEREDNVYKAKLADQAERYDEMVEAMKNVASRNVSDNELTVEERNLLSVAY 161 T+SERE KA++ A E A ++A + ++NE +E R+L +A+ Sbjct: 788 TISEREAIANKARIRSGALTLSETGPAFVDLALKVPAENEEKLENRDLEEMAW 840 >SB_29939| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1122 Score = 28.3 bits (60), Expect = 5.9 Identities = 13/43 (30%), Positives = 22/43 (51%) Frame = +3 Query: 21 DNVYKAKLADQAERYDEMVEAMKNVASRNVSDNELTVEERNLL 149 D VY+ L RY+E+V + N + +N TV +R ++ Sbjct: 80 DEVYRPYLTTDETRYNEVVFVVDNTVYQRYHNNTKTVTDRVII 122 >SB_47663| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1409 Score = 27.9 bits (59), Expect = 7.7 Identities = 13/40 (32%), Positives = 19/40 (47%) Frame = +3 Query: 21 DNVYKAKLADQAERYDEMVEAMKNVASRNVSDNELTVEER 140 D VY+ L RY EMV + N + +N TV ++ Sbjct: 170 DEVYRPYLTTDETRYTEMVFVVDNTVYQRYQNNTKTVTDK 209 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 16,602,191 Number of Sequences: 59808 Number of extensions: 313401 Number of successful extensions: 1308 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 1179 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1301 length of database: 16,821,457 effective HSP length: 79 effective length of database: 12,096,625 effective search space used: 1693527500 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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