Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30702
(661 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z66564-5|CAC42300.2| 198|Caenorhabditis elegans Hypothetical pr... 109 1e-24
Z66564-2|CAA91474.1| 248|Caenorhabditis elegans Hypothetical pr... 109 1e-24
Z73910-2|CAA98138.1| 248|Caenorhabditis elegans Hypothetical pr... 96 2e-20
U05038-1|AAA61872.1| 248|Caenorhabditis elegans 14-3-3 protein ... 96 2e-20
Z73910-3|CAA98135.1| 125|Caenorhabditis elegans Hypothetical pr... 47 1e-05
AC084197-35|AAN63424.1| 505|Caenorhabditis elegans Puf (pumilio... 29 2.9
Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical pr... 29 3.9
X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy ch... 29 3.9
U23517-6|AAB93340.1| 1280|Caenorhabditis elegans A kinase anchor... 29 3.9
AF209707-1|AAF28335.1| 522|Caenorhabditis elegans phosphoinosit... 29 3.9
AF045926-1|AAC24507.1| 1280|Caenorhabditis elegans A kinase anch... 29 3.9
AC006708-6|AAF60427.2| 522|Caenorhabditis elegans Phosphoinosit... 29 3.9
AF038609-6|AAK29795.1| 245|Caenorhabditis elegans Hypothetical ... 28 5.1
Z82077-9|CAB04941.1| 259|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z81133-5|CAB03442.2| 1838|Caenorhabditis elegans Hypothetical pr... 28 6.8
U32305-1|AAK18854.2| 469|Caenorhabditis elegans Hypothetical pr... 28 6.8
AL032650-2|CAA21705.1| 259|Caenorhabditis elegans Hypothetical ... 28 6.8
AC024776-11|AAK68461.1| 349|Caenorhabditis elegans Hypothetical... 28 6.8
Z75539-1|CAA99843.1| 672|Caenorhabditis elegans Hypothetical pr... 27 8.9
U23517-8|AAM98041.1| 605|Caenorhabditis elegans A kinase anchor... 27 8.9
U23517-7|AAM98040.1| 1284|Caenorhabditis elegans A kinase anchor... 27 8.9
>Z66564-5|CAC42300.2| 198|Caenorhabditis elegans Hypothetical
protein F52D10.3b protein.
Length = 198
Score = 109 bits (263), Expect = 1e-24
Identities = 53/110 (48%), Positives = 74/110 (67%)
Frame = +2
Query: 173 RRPPRLLADHLLHRTEGRDKRRRGQIELIRAYRSQVEKELRDICSDILGVLDKYLIPSSQ 352
RR + + +TEG +K++ ++ + YR +VEKELRDIC D+L +LDK+LIP +
Sbjct: 57 RRSSWRVISSIEQKTEGSEKKQ----QMAKEYREKVEKELRDICQDVLNLLDKFLIPKAG 112
Query: 353 TEESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTEL 502
ESKVFY KMKGDY+RYLAE A+G+DR E S +Y+ A DIA ++
Sbjct: 113 AAESKVFYLKMKGDYYRYLAEVASGDDRNSVVEKSQQSYQEAFDIAKDKM 162
Score = 93.5 bits (222), Expect = 1e-19
Identities = 49/78 (62%), Positives = 61/78 (78%)
Frame = +3
Query: 15 REDNVYKAKLADQAERYDEMVEAMKNVASRNVSDNELTVEERNLLSVAYKNVIGARRASW 194
+E+ V +AKLA+QAERYD+M +MK V EL+ EERNLLSVAYKNV+GARR+SW
Sbjct: 5 KEELVNRAKLAEQAERYDDMAASMKKVTELGA---ELSNEERNLLSVAYKNVVGARRSSW 61
Query: 195 RIISSIEQKEETKGAEDK 248
R+ISSIEQK T+G+E K
Sbjct: 62 RVISSIEQK--TEGSEKK 77
Score = 65.3 bits (152), Expect = 4e-11
Identities = 27/36 (75%), Positives = 32/36 (88%)
Frame = +1
Query: 493 DRTAPPHPIRLGLALNFSVFYYEILNSPDRACRLGK 600
D+ P HPIRLGLALNFSVF+YEILN+PD+AC+L K
Sbjct: 160 DKMQPTHPIRLGLALNFSVFFYEILNAPDKACQLAK 195
>Z66564-2|CAA91474.1| 248|Caenorhabditis elegans Hypothetical
protein F52D10.3a protein.
Length = 248
Score = 109 bits (263), Expect = 1e-24
Identities = 53/110 (48%), Positives = 74/110 (67%)
Frame = +2
Query: 173 RRPPRLLADHLLHRTEGRDKRRRGQIELIRAYRSQVEKELRDICSDILGVLDKYLIPSSQ 352
RR + + +TEG +K++ ++ + YR +VEKELRDIC D+L +LDK+LIP +
Sbjct: 57 RRSSWRVISSIEQKTEGSEKKQ----QMAKEYREKVEKELRDICQDVLNLLDKFLIPKAG 112
Query: 353 TEESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTEL 502
ESKVFY KMKGDY+RYLAE A+G+DR E S +Y+ A DIA ++
Sbjct: 113 AAESKVFYLKMKGDYYRYLAEVASGDDRNSVVEKSQQSYQEAFDIAKDKM 162
Score = 96.7 bits (230), Expect = 1e-20
Identities = 43/56 (76%), Positives = 50/56 (89%)
Frame = +1
Query: 493 DRTAPPHPIRLGLALNFSVFYYEILNSPDRACRLGKAAFYDAIAELDTLSEESYKD 660
D+ P HPIRLGLALNFSVF+YEILN+PD+AC+L K AF DAIAELDTL+E+SYKD
Sbjct: 160 DKMQPTHPIRLGLALNFSVFFYEILNAPDKACQLAKQAFDDAIAELDTLNEDSYKD 215
Score = 93.5 bits (222), Expect = 1e-19
Identities = 49/78 (62%), Positives = 61/78 (78%)
Frame = +3
Query: 15 REDNVYKAKLADQAERYDEMVEAMKNVASRNVSDNELTVEERNLLSVAYKNVIGARRASW 194
+E+ V +AKLA+QAERYD+M +MK V EL+ EERNLLSVAYKNV+GARR+SW
Sbjct: 5 KEELVNRAKLAEQAERYDDMAASMKKVTELGA---ELSNEERNLLSVAYKNVVGARRSSW 61
Query: 195 RIISSIEQKEETKGAEDK 248
R+ISSIEQK T+G+E K
Sbjct: 62 RVISSIEQK--TEGSEKK 77
>Z73910-2|CAA98138.1| 248|Caenorhabditis elegans Hypothetical
protein M117.2 protein.
Length = 248
Score = 96.3 bits (229), Expect = 2e-20
Identities = 45/64 (70%), Positives = 52/64 (81%)
Frame = +1
Query: 469 QGSLRHRHDRTAPPHPIRLGLALNFSVFYYEILNSPDRACRLGKAAFYDAIAELDTLSEE 648
Q +L D+ P HPIRLGLALNFSVFYYEILN+P+ AC+L K AF DAIAELDTL+E+
Sbjct: 151 QEALDIAKDKMQPTHPIRLGLALNFSVFYYEILNTPEHACQLAKQAFDDAIAELDTLNED 210
Query: 649 SYKD 660
SYKD
Sbjct: 211 SYKD 214
Score = 95.5 bits (227), Expect = 3e-20
Identities = 50/77 (64%), Positives = 61/77 (79%)
Frame = +3
Query: 18 EDNVYKAKLADQAERYDEMVEAMKNVASRNVSDNELTVEERNLLSVAYKNVIGARRASWR 197
E+ V +AKLA+QAERYD+M AMK V + EL+ EERNLLSVAYKNV+GARR+SWR
Sbjct: 6 EELVQRAKLAEQAERYDDMAAAMKKVTEQG---QELSNEERNLLSVAYKNVVGARRSSWR 62
Query: 198 IISSIEQKEETKGAEDK 248
+ISSIEQK T+G+E K
Sbjct: 63 VISSIEQK--TEGSEKK 77
Score = 93.5 bits (222), Expect = 1e-19
Identities = 50/110 (45%), Positives = 70/110 (63%)
Frame = +2
Query: 173 RRPPRLLADHLLHRTEGRDKRRRGQIELIRAYRSQVEKELRDICSDILGVLDKYLIPSSQ 352
RR + + +TEG +K++ +L + YR +VE+EL DIC D+L +LD++LI +
Sbjct: 57 RRSSWRVISSIEQKTEGSEKKQ----QLAKEYRVKVEQELNDICQDVLKLLDEFLIVKAG 112
Query: 353 TEESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTEL 502
ESKVFY KMKGDY+RYLAE A+ DR E S AY+ A DIA ++
Sbjct: 113 AAESKVFYLKMKGDYYRYLAEVAS-EDRAAVVEKSQKAYQEALDIAKDKM 161
>U05038-1|AAA61872.1| 248|Caenorhabditis elegans 14-3-3 protein
protein.
Length = 248
Score = 96.3 bits (229), Expect = 2e-20
Identities = 45/64 (70%), Positives = 52/64 (81%)
Frame = +1
Query: 469 QGSLRHRHDRTAPPHPIRLGLALNFSVFYYEILNSPDRACRLGKAAFYDAIAELDTLSEE 648
Q +L D+ P HPIRLGLALNFSVFYYEILN+P+ AC+L K AF DAIAELDTL+E+
Sbjct: 151 QEALDIAKDKMQPTHPIRLGLALNFSVFYYEILNTPEHACQLAKQAFDDAIAELDTLNED 210
Query: 649 SYKD 660
SYKD
Sbjct: 211 SYKD 214
Score = 95.5 bits (227), Expect = 3e-20
Identities = 50/77 (64%), Positives = 61/77 (79%)
Frame = +3
Query: 18 EDNVYKAKLADQAERYDEMVEAMKNVASRNVSDNELTVEERNLLSVAYKNVIGARRASWR 197
E+ V +AKLA+QAERYD+M AMK V + EL+ EERNLLSVAYKNV+GARR+SWR
Sbjct: 6 EELVQRAKLAEQAERYDDMAAAMKKVTEQG---QELSNEERNLLSVAYKNVVGARRSSWR 62
Query: 198 IISSIEQKEETKGAEDK 248
+ISSIEQK T+G+E K
Sbjct: 63 VISSIEQK--TEGSEKK 77
Score = 91.9 bits (218), Expect = 4e-19
Identities = 49/110 (44%), Positives = 69/110 (62%)
Frame = +2
Query: 173 RRPPRLLADHLLHRTEGRDKRRRGQIELIRAYRSQVEKELRDICSDILGVLDKYLIPSSQ 352
RR + + +TEG +K++ +L + YR +VE+EL DIC D+L +LD++LI +
Sbjct: 57 RRSSWRVISSIEQKTEGSEKKQ----QLAKEYRVKVEQELNDICQDVLKLLDEFLIVKAG 112
Query: 353 TEESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTEL 502
ESK FY KMKGDY+RYLAE A+ DR E S AY+ A DIA ++
Sbjct: 113 AAESKAFYLKMKGDYYRYLAEVAS-EDRAAVVEKSQKAYQEALDIAKDKM 161
>Z73910-3|CAA98135.1| 125|Caenorhabditis elegans Hypothetical
protein M117.3 protein.
Length = 125
Score = 46.8 bits (106), Expect = 1e-05
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Frame = +1
Query: 469 QGSLRHRHDRTAPPHPIRLGLALNFSVFYYEILNSPDRACRLGKAAFYDAIAELDTL--S 642
Q +L D+ P HPIRLGLALN S +++LN P A + ++A A EL+ + S
Sbjct: 29 QEALGIAKDKMQPTHPIRLGLALNASALNFDVLNLPKEANEIAQSALDSAHRELEKMKSS 88
Query: 643 EESY 654
+SY
Sbjct: 89 LDSY 92
>AC084197-35|AAN63424.1| 505|Caenorhabditis elegans Puf
(pumilio/fbf) domain-containingprotein 11 protein.
Length = 505
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = -3
Query: 575 GLFRIS**NTEKLSASPRRMGWGGAVRSWRCRRLPCTRPASSRQ 444
G R+S +T K +++P R G+GG WR P T PA Q
Sbjct: 54 GFQRVS--STPKNASTPYRQGFGGQFSKWR-TSTPMTTPARHPQ 94
>Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical protein
K12F2.1 protein.
Length = 1969
Score = 28.7 bits (61), Expect = 3.9
Identities = 24/98 (24%), Positives = 45/98 (45%), Gaps = 3/98 (3%)
Frame = +3
Query: 3 TMSEREDNVY--KAKLADQAERYDEMVEAMKNVASRNVSDNELTVEERNLLSVAYKNVIG 176
T+ +E++++ AKLA+ ++ +K + +RN E ERN + ++
Sbjct: 1092 TLKRKEEDLHHTNAKLAENNSIIAKLQRLIKELTARNAELEEELEAERNSRQKSDRSRSE 1151
Query: 177 ARRASWRIISSIEQKEETKGAEDKLN*S-ERTAARLRR 287
A R + +EQ+ A+ + N E A+LRR
Sbjct: 1152 AERELEELTERLEQQGGATAAQLEANKKREAEIAKLRR 1189
>X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy chain 3
protein.
Length = 1969
Score = 28.7 bits (61), Expect = 3.9
Identities = 24/98 (24%), Positives = 45/98 (45%), Gaps = 3/98 (3%)
Frame = +3
Query: 3 TMSEREDNVY--KAKLADQAERYDEMVEAMKNVASRNVSDNELTVEERNLLSVAYKNVIG 176
T+ +E++++ AKLA+ ++ +K + +RN E ERN + ++
Sbjct: 1092 TLKRKEEDLHHTNAKLAENNSIIAKLQRLIKELTARNAELEEELEAERNSRQKSDRSRSE 1151
Query: 177 ARRASWRIISSIEQKEETKGAEDKLN*S-ERTAARLRR 287
A R + +EQ+ A+ + N E A+LRR
Sbjct: 1152 AERELEELTERLEQQGGATAAQLEANKKREAEIAKLRR 1189
>U23517-6|AAB93340.1| 1280|Caenorhabditis elegans A kinase anchor
protein protein1, isoform a protein.
Length = 1280
Score = 28.7 bits (61), Expect = 3.9
Identities = 24/97 (24%), Positives = 38/97 (39%)
Frame = +2
Query: 83 DEECSITQRVRQ*ADSGGEEPAVGRLQERDRRPPRLLADHLLHRTEGRDKRRRGQIELIR 262
++EC++ V + DS EE + R R + H+LH ++ + R
Sbjct: 466 EDECTVVDAVNENTDSSIEENDEENTENRPRFDSSIATIHVLHESDSDESATP------R 519
Query: 263 AYRSQVEKELRDICSDILGVLDKYLIPSSQTEESKVF 373
R E EL+ LG Y IP S+ +F
Sbjct: 520 RERRLTESELQ------LGKTSPYWIPDSECPNCMLF 550
>AF209707-1|AAF28335.1| 522|Caenorhabditis elegans phosphoinositide
3-kinase adaptersubunit protein.
Length = 522
Score = 28.7 bits (61), Expect = 3.9
Identities = 15/46 (32%), Positives = 27/46 (58%)
Frame = +3
Query: 36 AKLADQAERYDEMVEAMKNVASRNVSDNELTVEERNLLSVAYKNVI 173
AKL D A + E E++ + +++V DNE+ + + N L A +V+
Sbjct: 166 AKLYDSAHQEMERAESLYHALNQSVRDNEIKLGKLNNLLEAETDVV 211
>AF045926-1|AAC24507.1| 1280|Caenorhabditis elegans A kinase anchor
protein protein.
Length = 1280
Score = 28.7 bits (61), Expect = 3.9
Identities = 24/97 (24%), Positives = 38/97 (39%)
Frame = +2
Query: 83 DEECSITQRVRQ*ADSGGEEPAVGRLQERDRRPPRLLADHLLHRTEGRDKRRRGQIELIR 262
++EC++ V + DS EE + R R + H+LH ++ + R
Sbjct: 466 EDECTVVDAVNENTDSSIEENDEENTENRPRFDSSIATIHVLHESDSDESATP------R 519
Query: 263 AYRSQVEKELRDICSDILGVLDKYLIPSSQTEESKVF 373
R E EL+ LG Y IP S+ +F
Sbjct: 520 RERRLTESELQ------LGKTSPYWIPDSECPNCMLF 550
>AC006708-6|AAF60427.2| 522|Caenorhabditis elegans Phosphoinositide
kinase adaptersubunit protein 1 protein.
Length = 522
Score = 28.7 bits (61), Expect = 3.9
Identities = 15/46 (32%), Positives = 27/46 (58%)
Frame = +3
Query: 36 AKLADQAERYDEMVEAMKNVASRNVSDNELTVEERNLLSVAYKNVI 173
AKL D A + E E++ + +++V DNE+ + + N L A +V+
Sbjct: 166 AKLYDSAHQEMERAESLYHALNQSVRDNEIKLGKLNNLLEAETDVV 211
>AF038609-6|AAK29795.1| 245|Caenorhabditis elegans Hypothetical
protein C54E4.1 protein.
Length = 245
Score = 28.3 bits (60), Expect = 5.1
Identities = 15/48 (31%), Positives = 20/48 (41%)
Frame = +1
Query: 313 PRCPRQVPHPQLTDRRIKSFLLQNEGRLPPVPGRVRDRQRPQGGCREL 456
P P +P+PQLT RR SF + R+ +G EL
Sbjct: 106 PGTPSTIPNPQLTQRRATSFRSNGSSTSSTLTVNGEGRKSRKGSTTEL 153
>Z82077-9|CAB04941.1| 259|Caenorhabditis elegans Hypothetical
protein W09C5.1 protein.
Length = 259
Score = 27.9 bits (59), Expect = 6.8
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Frame = +3
Query: 30 YKAKLADQAERYDEMVEAMKNVASRNVSDNELTVEERNLLSVAYKNVIGARRASWRIISS 209
+KAKL + +RY E VE K + D + TVE+ + +V + ++ S ++S+
Sbjct: 45 HKAKLYHK-KRYSEKVEMRKLLKQHEEKDQKNTVEQPDKGAVPAYLLDRQQQTSGTVLSN 103
Query: 210 -IEQKEETKGAE 242
I+QK + K +
Sbjct: 104 MIKQKRKQKAGK 115
>Z81133-5|CAB03442.2| 1838|Caenorhabditis elegans Hypothetical
protein T28B8.3a protein.
Length = 1838
Score = 27.9 bits (59), Expect = 6.8
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +1
Query: 499 TAPPHPIRLGLALN-FSVFYYEILNSPDRACRLGKAAFYDA 618
TA P RL + F+ F YEI+ +PD R + YD+
Sbjct: 411 TAVSEPHRLTTLIEAFTFFVYEIIRTPDAEYRTPRNIVYDS 451
>U32305-1|AAK18854.2| 469|Caenorhabditis elegans Hypothetical
protein B0336.6 protein.
Length = 469
Score = 27.9 bits (59), Expect = 6.8
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = +1
Query: 406 PGRVRDRQRPQGGCRELAGRVQGSLRHRHDRTAPPHPIRLGLA 534
PG V +Q+ Q ++ G ++ S +RHD PP+ + G++
Sbjct: 316 PGSVVQQQQQQQMQQQNYGTIRKSTVNRHDLPPPPNSLLTGMS 358
>AL032650-2|CAA21705.1| 259|Caenorhabditis elegans Hypothetical
protein W09C5.1 protein.
Length = 259
Score = 27.9 bits (59), Expect = 6.8
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Frame = +3
Query: 30 YKAKLADQAERYDEMVEAMKNVASRNVSDNELTVEERNLLSVAYKNVIGARRASWRIISS 209
+KAKL + +RY E VE K + D + TVE+ + +V + ++ S ++S+
Sbjct: 45 HKAKLYHK-KRYSEKVEMRKLLKQHEEKDQKNTVEQPDKGAVPAYLLDRQQQTSGTVLSN 103
Query: 210 -IEQKEETKGAE 242
I+QK + K +
Sbjct: 104 MIKQKRKQKAGK 115
>AC024776-11|AAK68461.1| 349|Caenorhabditis elegans Hypothetical
protein Y41D4B.11 protein.
Length = 349
Score = 27.9 bits (59), Expect = 6.8
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = +2
Query: 83 DEECSITQRVRQ*ADSGGEEPAVGRLQERDRRPPRLLADHLLHRTEGRDKRRRGQ 247
DE ++ + + GG E A +L ++DRR L A R KRR G+
Sbjct: 202 DEVSEKRAKIEKSTEKGGSEKATTKLSKKDRRKETLKA-----RKSDEQKRRAGE 251
>Z75539-1|CAA99843.1| 672|Caenorhabditis elegans Hypothetical
protein F28C1.1 protein.
Length = 672
Score = 27.5 bits (58), Expect = 8.9
Identities = 20/66 (30%), Positives = 29/66 (43%)
Frame = +2
Query: 71 NGGGDEECSITQRVRQ*ADSGGEEPAVGRLQERDRRPPRLLADHLLHRTEGRDKRRRGQI 250
NGG + R R + S + R + RDRR PR + R+ RD++RR +
Sbjct: 392 NGGMNRRSWSRSRSRSRSRSPPRRRSRSRSRTRDRRRPR--RSNSRRRSRSRDRQRRSRS 449
Query: 251 ELIRAY 268
R Y
Sbjct: 450 RDRRRY 455
>U23517-8|AAM98041.1| 605|Caenorhabditis elegans A kinase anchor
protein protein1, isoform c protein.
Length = 605
Score = 27.5 bits (58), Expect = 8.9
Identities = 23/90 (25%), Positives = 36/90 (40%)
Frame = +2
Query: 83 DEECSITQRVRQ*ADSGGEEPAVGRLQERDRRPPRLLADHLLHRTEGRDKRRRGQIELIR 262
++EC++ V + DS EE + R R + H+LH ++ + R
Sbjct: 466 EDECTVVDAVNENTDSSIEENDEENTENRPRFDSSIATIHVLHESDSDESATP------R 519
Query: 263 AYRSQVEKELRDICSDILGVLDKYLIPSSQ 352
R E EL+ LG Y IP S+
Sbjct: 520 RERRLTESELQ------LGKTSPYWIPDSE 543
>U23517-7|AAM98040.1| 1284|Caenorhabditis elegans A kinase anchor
protein protein1, isoform b protein.
Length = 1284
Score = 27.5 bits (58), Expect = 8.9
Identities = 23/90 (25%), Positives = 36/90 (40%)
Frame = +2
Query: 83 DEECSITQRVRQ*ADSGGEEPAVGRLQERDRRPPRLLADHLLHRTEGRDKRRRGQIELIR 262
++EC++ V + DS EE + R R + H+LH ++ + R
Sbjct: 466 EDECTVVDAVNENTDSSIEENDEENTENRPRFDSSIATIHVLHESDSDESATP------R 519
Query: 263 AYRSQVEKELRDICSDILGVLDKYLIPSSQ 352
R E EL+ LG Y IP S+
Sbjct: 520 RERRLTESELQ------LGKTSPYWIPDSE 543
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,034,907
Number of Sequences: 27780
Number of extensions: 232777
Number of successful extensions: 803
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 751
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 797
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1476380920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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