Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30701
         (529 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    22   2.9  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    22   3.8  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   5.1  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   5.1  
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    21   6.7  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       21   8.9  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    21   8.9  

>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 11/28 (39%), Positives = 14/28 (50%), Gaps = 3/28 (10%)
 Frame = -1

Query: 451 QQQNNETKTTKI---HIHENLYAHAKHN 377
           QQQNN    T     H H   + HA+H+
Sbjct: 308 QQQNNNNAATNNQNHHHHAGHHIHAQHH 335


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -2

Query: 450 NNRITKPRRQKFIYTRTCTRTLN 382
           NN+ T    Q F+Y  T T  L+
Sbjct: 310 NNQFTMMEEQAFLYDSTITAPLS 332


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 5.1
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = -1

Query: 463 LIQRQQQNNETKTTKIHIHENLYAHAKHNARARE 362
           L+ R    N    + IH+  + Y  ++  ARARE
Sbjct: 131 LLHRPDTQNLDLPSFIHVFPDKYVDSQVFARARE 164


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 5.1
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = +3

Query: 396 YRFSCI*IFVVLVSLFCC 449
           Y F C  I   +  LFCC
Sbjct: 167 YHFFCAFIIFTMHLLFCC 184


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = -2

Query: 459 YNVNNRITKPRRQKFIYTRTCT 394
           YN+++  T P+     YT+ C+
Sbjct: 27  YNIHHGATPPQSPNQQYTKDCS 48


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -1

Query: 424 TKIHIHENLYAHAKHNARARE 362
           T+  IHE    + KH+A  R+
Sbjct: 370 TREEIHEKARENLKHHANLRQ 390


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 8/31 (25%), Positives = 15/31 (48%)
 Frame = -2

Query: 429 RRQKFIYTRTCTRTLNITRAPERFDVIMKIL 337
           R Q ++Y  TC   +N+       D+  ++L
Sbjct: 493 RDQNYLYRMTCLFCINVLAEACGSDITTRLL 523


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,399
Number of Sequences: 336
Number of extensions: 2095
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12782794
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)