BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdV30699 (549 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 05_03_0257 + 11145558-11145876,11148181-11148347,11149114-111493... 68 6e-12 03_05_0228 - 22137771-22138016,22138109-22138306,22138852-221390... 68 6e-12 06_02_0082 + 11536799-11537554,11538210-11538334,11538507-11538687 38 0.005 06_01_0657 + 4767803-4768114,4768394-4768471,4768763-4768786 29 2.4 10_08_0165 + 15356748-15356811,15357113-15357186,15357311-153573... 29 3.2 04_03_0121 + 11506644-11508107 29 3.2 05_04_0300 - 19969066-19969535,19971216-19972686 28 4.3 03_05_0837 + 28090924-28091880 28 5.6 03_01_0013 - 105281-105552,105762-105838,105839-106524,106655-10... 28 5.6 01_06_0802 + 32087661-32087965,32088106-32088220,32088302-320884... 28 5.6 08_02_1487 - 27479463-27479988,27481625-27481887 27 7.5 07_03_1772 + 29411874-29413218,29413355-29413421,29413749-294138... 27 7.5 01_05_0212 + 19347142-19347444,19348853-19348907,19349117-193492... 27 7.5 09_06_0224 + 21661317-21661386,21663735-21663865,21663904-216639... 27 9.9 09_06_0043 + 20448793-20449823,20449915-20450030,20450491-204506... 27 9.9 03_02_0956 + 12700507-12700540,12700640-12700676,12700792-127010... 27 9.9 >05_03_0257 + 11145558-11145876,11148181-11148347,11149114-11149311, 11149405-11149650 Length = 309 Score = 67.7 bits (158), Expect = 6e-12 Identities = 39/116 (33%), Positives = 62/116 (53%) Frame = +1 Query: 160 PTTPDKALTLDYPTKQAYLVFTIPLPRARPQAPVSNAGHLSAIPTSMLSTSFKPTRNLQS 339 PT PDKA L Y KQ Y+V+ + + R + PV G + P T K RN +S Sbjct: 147 PTRPDKARRLGYKAKQGYVVYRVRVRRGGRKRPVPK-GIVYGKPKHQGITQLKFQRNKRS 205 Query: 340 IAQATCLSVLPVLSIYSALTGFHNILHTRYFQVILVDPSHNSIRLDPKVNWILNAV 507 +A+ L L + ++ + + +YF++ILVD +H++IR DP++NW+ V Sbjct: 206 VAEERAGRKLGGLRVLNSYWVNEDSTY-KYFEIILVDVAHSAIRNDPRINWLCKPV 260 >03_05_0228 - 22137771-22138016,22138109-22138306,22138852-22139018, 22139129-22139132 Length = 204 Score = 67.7 bits (158), Expect = 6e-12 Identities = 39/116 (33%), Positives = 62/116 (53%) Frame = +1 Query: 160 PTTPDKALTLDYPTKQAYLVFTIPLPRARPQAPVSNAGHLSAIPTSMLSTSFKPTRNLQS 339 PT PDKA L Y KQ Y+V+ + + R + PV G + P T K RN +S Sbjct: 42 PTRPDKARRLGYKAKQGYVVYRVRVRRGGRKRPVPK-GIVYGKPKHQGITQLKFQRNKRS 100 Query: 340 IAQATCLSVLPVLSIYSALTGFHNILHTRYFQVILVDPSHNSIRLDPKVNWILNAV 507 +A+ L L + ++ + + +YF++ILVD +H++IR DP++NW+ V Sbjct: 101 VAEERAGRKLGGLRVLNSYWVNEDSTY-KYFEIILVDVAHSAIRNDPRINWLCKPV 155 >06_02_0082 + 11536799-11537554,11538210-11538334,11538507-11538687 Length = 353 Score = 37.9 bits (84), Expect = 0.005 Identities = 18/38 (47%), Positives = 24/38 (63%), Gaps = 1/38 (2%) Frame = +1 Query: 430 FQVILVDPSHNSIRLDPKVNWILNAVLSIVRS-WSHFC 540 F++ILVD +H++IR DPK L A R+ WSH C Sbjct: 299 FEIILVDVAHSAIRDDPKDQLALQACAQARRAPWSHLC 336 >06_01_0657 + 4767803-4768114,4768394-4768471,4768763-4768786 Length = 137 Score = 29.1 bits (62), Expect = 2.4 Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 4/35 (11%) Frame = -1 Query: 384 DGEHRKDGQARCLSNGLKVACG----LEAG*QHGC 292 +GE RK+ + RCL K ACG E G + GC Sbjct: 43 EGEGRKEERGRCLQRERKEACGSENKKEKGRERGC 77 >10_08_0165 + 15356748-15356811,15357113-15357186,15357311-15357394, 15357508-15357602,15357737-15357790,15357791-15357896, 15358236-15358277,15358585-15358674,15358788-15358984, 15359355-15359413,15360166-15362252 Length = 983 Score = 28.7 bits (61), Expect = 3.2 Identities = 14/38 (36%), Positives = 18/38 (47%) Frame = +1 Query: 142 WHRSPIPTTPDKALTLDYPTKQAYLVFTIPLPRARPQA 255 WH+ I D L DY K+A LV + L + P A Sbjct: 880 WHKGDIAAAADARLCGDYDAKEAALVLKLGLLCSHPVA 917 >04_03_0121 + 11506644-11508107 Length = 487 Score = 28.7 bits (61), Expect = 3.2 Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 1/50 (2%) Frame = +1 Query: 52 YSTLVYEKTDPSYAFFLRLSLYGSTVT*LLWHRSPI-PTTPDKALTLDYP 198 ++ V + ++AFF+ +GS V LW PI P + L +YP Sbjct: 131 WTVTVARRRGCAHAFFVSCGAFGSAVVHSLWSHLPIRPDEAGRILLPEYP 180 >05_04_0300 - 19969066-19969535,19971216-19972686 Length = 646 Score = 28.3 bits (60), Expect = 4.3 Identities = 16/65 (24%), Positives = 33/65 (50%), Gaps = 3/65 (4%) Frame = +1 Query: 226 IPLPRARPQAPVSNAGHLSAIPT-SMLSTSFKPTRNLQSIAQATCLSVLPVLSIYSA-LT 399 +P+PR +PQ PV ++ + + + K + +A + L +L ++ ++ A + Sbjct: 273 VPIPRLKPQQPVPSSKVVKKPESKKTVENKSKSKTKTKKVASVSLLGLLLIMLVFGAFIP 332 Query: 400 GF-HN 411 GF HN Sbjct: 333 GFNHN 337 >03_05_0837 + 28090924-28091880 Length = 318 Score = 27.9 bits (59), Expect = 5.6 Identities = 12/29 (41%), Positives = 19/29 (65%) Frame = +1 Query: 355 CLSVLPVLSIYSALTGFHNILHTRYFQVI 441 C +L +S+YS LTGFH + RY +++ Sbjct: 15 CRGILEEVSVYSPLTGFHATM-PRYDELL 42 >03_01_0013 - 105281-105552,105762-105838,105839-106524,106655-106738, 106914-107114,107202-107309,107766-107855,108505-108551, 109096-109276,110010-110135,110220-110386,110877-111072 Length = 744 Score = 27.9 bits (59), Expect = 5.6 Identities = 14/40 (35%), Positives = 20/40 (50%) Frame = +3 Query: 6 LYTSATHC*HRVPTHIFNTCIRKN*PILCLFSSPLTLWQY 125 LYTS+ +P H+F+ +RKN LF + L Y Sbjct: 701 LYTSSAIITEFIPPHVFSMALRKNMSARQLFDMYILLLSY 740 >01_06_0802 + 32087661-32087965,32088106-32088220,32088302-32088421, 32089678-32089788,32090084-32090122,32090965-32091069, 32091149-32091187,32091923-32092015 Length = 308 Score = 27.9 bits (59), Expect = 5.6 Identities = 18/53 (33%), Positives = 24/53 (45%) Frame = +1 Query: 193 YPTKQAYLVFTIPLPRARPQAPVSNAGHLSAIPTSMLSTSFKPTRNLQSIAQA 351 YP K YL F IP+P A A + A L T + +F P + + I A Sbjct: 247 YPKKLVYLYFFIPIPAAIMGAILIGADLLRVKETILNIITFIPVVDCKGIFMA 299 >08_02_1487 - 27479463-27479988,27481625-27481887 Length = 262 Score = 27.5 bits (58), Expect = 7.5 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = +1 Query: 472 LDPKVNWILNAVLSIVRSWSHF 537 LDP VNW+L A L W +F Sbjct: 189 LDPLVNWLLEAELPADEPWLNF 210 >07_03_1772 + 29411874-29413218,29413355-29413421,29413749-29413896, 29415293-29415416,29416340-29416590,29416923-29418449, 29418786-29418896,29419576-29419734,29419827-29421734 Length = 1879 Score = 27.5 bits (58), Expect = 7.5 Identities = 13/39 (33%), Positives = 24/39 (61%), Gaps = 2/39 (5%) Frame = -3 Query: 151 SGAIGVK*R--YCHRVRGEEKRHKMGQFFRIQVLNICVG 41 SG +GV +C +V G+ KRH + ++ Q+++ C+G Sbjct: 1049 SGTLGVNCEPAFCQKVGGKRKRHMCEREYK-QMIDQCIG 1086 >01_05_0212 + 19347142-19347444,19348853-19348907,19349117-19349292, 19350033-19350254,19350359-19350597,19351100-19351625, 19351707-19351980,19352166-19352225,19352362-19353025, 19353747-19353975,19354071-19354337,19354414-19354602, 19354771-19355415 Length = 1282 Score = 27.5 bits (58), Expect = 7.5 Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 3/52 (5%) Frame = +1 Query: 175 KALTLDYPTKQAYLV---FTIPLPRARPQAPVSNAGHLSAIPTSMLSTSFKP 321 K + YPT+ YLV F++ +P R A V +G + S++ + P Sbjct: 384 KDVYFSYPTRPEYLVFNGFSLQIPSGRTMALVGESGSGKSTVISLVERFYDP 435 >09_06_0224 + 21661317-21661386,21663735-21663865,21663904-21663983, 21664248-21664372,21664745-21664830,21664932-21665168, 21665261-21665380,21665502-21665602,21665655-21665758, 21665851-21666047 Length = 416 Score = 27.1 bits (57), Expect = 9.9 Identities = 10/27 (37%), Positives = 17/27 (62%) Frame = +3 Query: 387 FSSYWVSQHSSYKVFPGYPRGPVTQFH 467 FS +W+ Q+S+ K GY +G ++ H Sbjct: 33 FSRFWLQQNSNLKRSKGYEQGELSLAH 59 >09_06_0043 + 20448793-20449823,20449915-20450030,20450491-20450661, 20450761-20450807,20451090-20451182,20451571-20451709, 20452028-20452130,20452749-20452866 Length = 605 Score = 27.1 bits (57), Expect = 9.9 Identities = 18/64 (28%), Positives = 31/64 (48%) Frame = +1 Query: 226 IPLPRARPQAPVSNAGHLSAIPTSMLSTSFKPTRNLQSIAQATCLSVLPVLSIYSALTGF 405 +PLPR R Q P+S A S + + S + +++ LS P L+ +AL G+ Sbjct: 36 LPLPRRRGQRPISAAAAASDLLYAAPSLKSRLAAG-ETLYGLFLLSFSPTLAELAALAGY 94 Query: 406 HNIL 417 ++ Sbjct: 95 DYVV 98 >03_02_0956 + 12700507-12700540,12700640-12700676,12700792-12701002, 12701085-12701246,12701897-12702016,12702103-12702525 Length = 328 Score = 27.1 bits (57), Expect = 9.9 Identities = 12/41 (29%), Positives = 22/41 (53%) Frame = +2 Query: 314 SSPHATFNPLLRQRACPSFRCSPSIQLLLGFTTFFIQGISR 436 +SP ATF ++R ++ FR P + LL + + G+ + Sbjct: 21 ASPIATFRRIVRSKSTEEFRWLPYVTTLLSTSLWTFYGLHK 61 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 16,450,466 Number of Sequences: 37544 Number of extensions: 357166 Number of successful extensions: 933 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 899 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 928 length of database: 14,793,348 effective HSP length: 78 effective length of database: 11,864,916 effective search space used: 1233951264 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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