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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30699
         (549 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_03_0257 + 11145558-11145876,11148181-11148347,11149114-111493...    68   6e-12
03_05_0228 - 22137771-22138016,22138109-22138306,22138852-221390...    68   6e-12
06_02_0082 + 11536799-11537554,11538210-11538334,11538507-11538687     38   0.005
06_01_0657 + 4767803-4768114,4768394-4768471,4768763-4768786           29   2.4  
10_08_0165 + 15356748-15356811,15357113-15357186,15357311-153573...    29   3.2  
04_03_0121 + 11506644-11508107                                         29   3.2  
05_04_0300 - 19969066-19969535,19971216-19972686                       28   4.3  
03_05_0837 + 28090924-28091880                                         28   5.6  
03_01_0013 - 105281-105552,105762-105838,105839-106524,106655-10...    28   5.6  
01_06_0802 + 32087661-32087965,32088106-32088220,32088302-320884...    28   5.6  
08_02_1487 - 27479463-27479988,27481625-27481887                       27   7.5  
07_03_1772 + 29411874-29413218,29413355-29413421,29413749-294138...    27   7.5  
01_05_0212 + 19347142-19347444,19348853-19348907,19349117-193492...    27   7.5  
09_06_0224 + 21661317-21661386,21663735-21663865,21663904-216639...    27   9.9  
09_06_0043 + 20448793-20449823,20449915-20450030,20450491-204506...    27   9.9  
03_02_0956 + 12700507-12700540,12700640-12700676,12700792-127010...    27   9.9  

>05_03_0257 +
           11145558-11145876,11148181-11148347,11149114-11149311,
           11149405-11149650
          Length = 309

 Score = 67.7 bits (158), Expect = 6e-12
 Identities = 39/116 (33%), Positives = 62/116 (53%)
 Frame = +1

Query: 160 PTTPDKALTLDYPTKQAYLVFTIPLPRARPQAPVSNAGHLSAIPTSMLSTSFKPTRNLQS 339
           PT PDKA  L Y  KQ Y+V+ + + R   + PV   G +   P     T  K  RN +S
Sbjct: 147 PTRPDKARRLGYKAKQGYVVYRVRVRRGGRKRPVPK-GIVYGKPKHQGITQLKFQRNKRS 205

Query: 340 IAQATCLSVLPVLSIYSALTGFHNILHTRYFQVILVDPSHNSIRLDPKVNWILNAV 507
           +A+      L  L + ++     +  + +YF++ILVD +H++IR DP++NW+   V
Sbjct: 206 VAEERAGRKLGGLRVLNSYWVNEDSTY-KYFEIILVDVAHSAIRNDPRINWLCKPV 260


>03_05_0228 -
           22137771-22138016,22138109-22138306,22138852-22139018,
           22139129-22139132
          Length = 204

 Score = 67.7 bits (158), Expect = 6e-12
 Identities = 39/116 (33%), Positives = 62/116 (53%)
 Frame = +1

Query: 160 PTTPDKALTLDYPTKQAYLVFTIPLPRARPQAPVSNAGHLSAIPTSMLSTSFKPTRNLQS 339
           PT PDKA  L Y  KQ Y+V+ + + R   + PV   G +   P     T  K  RN +S
Sbjct: 42  PTRPDKARRLGYKAKQGYVVYRVRVRRGGRKRPVPK-GIVYGKPKHQGITQLKFQRNKRS 100

Query: 340 IAQATCLSVLPVLSIYSALTGFHNILHTRYFQVILVDPSHNSIRLDPKVNWILNAV 507
           +A+      L  L + ++     +  + +YF++ILVD +H++IR DP++NW+   V
Sbjct: 101 VAEERAGRKLGGLRVLNSYWVNEDSTY-KYFEIILVDVAHSAIRNDPRINWLCKPV 155


>06_02_0082 + 11536799-11537554,11538210-11538334,11538507-11538687
          Length = 353

 Score = 37.9 bits (84), Expect = 0.005
 Identities = 18/38 (47%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
 Frame = +1

Query: 430 FQVILVDPSHNSIRLDPKVNWILNAVLSIVRS-WSHFC 540
           F++ILVD +H++IR DPK    L A     R+ WSH C
Sbjct: 299 FEIILVDVAHSAIRDDPKDQLALQACAQARRAPWSHLC 336


>06_01_0657 + 4767803-4768114,4768394-4768471,4768763-4768786
          Length = 137

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 4/35 (11%)
 Frame = -1

Query: 384 DGEHRKDGQARCLSNGLKVACG----LEAG*QHGC 292
           +GE RK+ + RCL    K ACG     E G + GC
Sbjct: 43  EGEGRKEERGRCLQRERKEACGSENKKEKGRERGC 77


>10_08_0165 +
           15356748-15356811,15357113-15357186,15357311-15357394,
           15357508-15357602,15357737-15357790,15357791-15357896,
           15358236-15358277,15358585-15358674,15358788-15358984,
           15359355-15359413,15360166-15362252
          Length = 983

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 14/38 (36%), Positives = 18/38 (47%)
 Frame = +1

Query: 142 WHRSPIPTTPDKALTLDYPTKQAYLVFTIPLPRARPQA 255
           WH+  I    D  L  DY  K+A LV  + L  + P A
Sbjct: 880 WHKGDIAAAADARLCGDYDAKEAALVLKLGLLCSHPVA 917


>04_03_0121 + 11506644-11508107
          Length = 487

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
 Frame = +1

Query: 52  YSTLVYEKTDPSYAFFLRLSLYGSTVT*LLWHRSPI-PTTPDKALTLDYP 198
           ++  V  +   ++AFF+    +GS V   LW   PI P    + L  +YP
Sbjct: 131 WTVTVARRRGCAHAFFVSCGAFGSAVVHSLWSHLPIRPDEAGRILLPEYP 180


>05_04_0300 - 19969066-19969535,19971216-19972686
          Length = 646

 Score = 28.3 bits (60), Expect = 4.3
 Identities = 16/65 (24%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
 Frame = +1

Query: 226 IPLPRARPQAPVSNAGHLSAIPT-SMLSTSFKPTRNLQSIAQATCLSVLPVLSIYSA-LT 399
           +P+PR +PQ PV ++  +    +   +    K     + +A  + L +L ++ ++ A + 
Sbjct: 273 VPIPRLKPQQPVPSSKVVKKPESKKTVENKSKSKTKTKKVASVSLLGLLLIMLVFGAFIP 332

Query: 400 GF-HN 411
           GF HN
Sbjct: 333 GFNHN 337


>03_05_0837 + 28090924-28091880
          Length = 318

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = +1

Query: 355 CLSVLPVLSIYSALTGFHNILHTRYFQVI 441
           C  +L  +S+YS LTGFH  +  RY +++
Sbjct: 15  CRGILEEVSVYSPLTGFHATM-PRYDELL 42


>03_01_0013 -
           105281-105552,105762-105838,105839-106524,106655-106738,
           106914-107114,107202-107309,107766-107855,108505-108551,
           109096-109276,110010-110135,110220-110386,110877-111072
          Length = 744

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = +3

Query: 6   LYTSATHC*HRVPTHIFNTCIRKN*PILCLFSSPLTLWQY 125
           LYTS+      +P H+F+  +RKN     LF   + L  Y
Sbjct: 701 LYTSSAIITEFIPPHVFSMALRKNMSARQLFDMYILLLSY 740


>01_06_0802 +
           32087661-32087965,32088106-32088220,32088302-32088421,
           32089678-32089788,32090084-32090122,32090965-32091069,
           32091149-32091187,32091923-32092015
          Length = 308

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 18/53 (33%), Positives = 24/53 (45%)
 Frame = +1

Query: 193 YPTKQAYLVFTIPLPRARPQAPVSNAGHLSAIPTSMLSTSFKPTRNLQSIAQA 351
           YP K  YL F IP+P A   A +  A  L    T +   +F P  + + I  A
Sbjct: 247 YPKKLVYLYFFIPIPAAIMGAILIGADLLRVKETILNIITFIPVVDCKGIFMA 299


>08_02_1487 - 27479463-27479988,27481625-27481887
          Length = 262

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +1

Query: 472 LDPKVNWILNAVLSIVRSWSHF 537
           LDP VNW+L A L     W +F
Sbjct: 189 LDPLVNWLLEAELPADEPWLNF 210


>07_03_1772 + 29411874-29413218,29413355-29413421,29413749-29413896,
            29415293-29415416,29416340-29416590,29416923-29418449,
            29418786-29418896,29419576-29419734,29419827-29421734
          Length = 1879

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 13/39 (33%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
 Frame = -3

Query: 151  SGAIGVK*R--YCHRVRGEEKRHKMGQFFRIQVLNICVG 41
            SG +GV     +C +V G+ KRH   + ++ Q+++ C+G
Sbjct: 1049 SGTLGVNCEPAFCQKVGGKRKRHMCEREYK-QMIDQCIG 1086


>01_05_0212 +
           19347142-19347444,19348853-19348907,19349117-19349292,
           19350033-19350254,19350359-19350597,19351100-19351625,
           19351707-19351980,19352166-19352225,19352362-19353025,
           19353747-19353975,19354071-19354337,19354414-19354602,
           19354771-19355415
          Length = 1282

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
 Frame = +1

Query: 175 KALTLDYPTKQAYLV---FTIPLPRARPQAPVSNAGHLSAIPTSMLSTSFKP 321
           K +   YPT+  YLV   F++ +P  R  A V  +G   +   S++   + P
Sbjct: 384 KDVYFSYPTRPEYLVFNGFSLQIPSGRTMALVGESGSGKSTVISLVERFYDP 435


>09_06_0224 +
           21661317-21661386,21663735-21663865,21663904-21663983,
           21664248-21664372,21664745-21664830,21664932-21665168,
           21665261-21665380,21665502-21665602,21665655-21665758,
           21665851-21666047
          Length = 416

 Score = 27.1 bits (57), Expect = 9.9
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +3

Query: 387 FSSYWVSQHSSYKVFPGYPRGPVTQFH 467
           FS +W+ Q+S+ K   GY +G ++  H
Sbjct: 33  FSRFWLQQNSNLKRSKGYEQGELSLAH 59


>09_06_0043 +
           20448793-20449823,20449915-20450030,20450491-20450661,
           20450761-20450807,20451090-20451182,20451571-20451709,
           20452028-20452130,20452749-20452866
          Length = 605

 Score = 27.1 bits (57), Expect = 9.9
 Identities = 18/64 (28%), Positives = 31/64 (48%)
 Frame = +1

Query: 226 IPLPRARPQAPVSNAGHLSAIPTSMLSTSFKPTRNLQSIAQATCLSVLPVLSIYSALTGF 405
           +PLPR R Q P+S A   S +  +  S   +     +++     LS  P L+  +AL G+
Sbjct: 36  LPLPRRRGQRPISAAAAASDLLYAAPSLKSRLAAG-ETLYGLFLLSFSPTLAELAALAGY 94

Query: 406 HNIL 417
             ++
Sbjct: 95  DYVV 98


>03_02_0956 +
           12700507-12700540,12700640-12700676,12700792-12701002,
           12701085-12701246,12701897-12702016,12702103-12702525
          Length = 328

 Score = 27.1 bits (57), Expect = 9.9
 Identities = 12/41 (29%), Positives = 22/41 (53%)
 Frame = +2

Query: 314 SSPHATFNPLLRQRACPSFRCSPSIQLLLGFTTFFIQGISR 436
           +SP ATF  ++R ++   FR  P +  LL  + +   G+ +
Sbjct: 21  ASPIATFRRIVRSKSTEEFRWLPYVTTLLSTSLWTFYGLHK 61


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,450,466
Number of Sequences: 37544
Number of extensions: 357166
Number of successful extensions: 933
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 899
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 928
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1233951264
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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