Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30697
         (387 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY089523-1|AAL90261.1|  143|Drosophila melanogaster GM14585p pro...    93   9e-20
AE013599-1845|AAF58277.2|  143|Drosophila melanogaster CG8415-PA...    93   9e-20
M19494-1|AAA28935.1|  140|Drosophila melanogaster protein ( D.me...    34   0.056
BT015958-1|AAV36843.1|  140|Drosophila melanogaster RH56553p pro...    34   0.056
AL133505-2|CAB65841.1|  140|Drosophila melanogaster EG:BACH59J11...    34   0.056
AL133505-1|CAB63528.1|  154|Drosophila melanogaster EG:BACH59J11...    34   0.056
AE014298-399|AAF45781.1|  140|Drosophila melanogaster CG7925-PB ...    34   0.056
AJ250320-1|CAB65721.1|  140|Drosophila melanogaster technical kn...    31   0.40 
AY047577-1|AAK77309.1|  357|Drosophila melanogaster GH08848p pro...    27   8.5  
AF215861-1|AAF32288.1|  534|Drosophila melanogaster Myt1 kinase-...    27   8.5  
AE014296-1005|AAF50747.3|  533|Drosophila melanogaster CG32417-P...    27   8.5  

>AY089523-1|AAL90261.1|  143|Drosophila melanogaster GM14585p
           protein.
          Length = 143

 Score = 93.5 bits (222), Expect = 9e-20
 Identities = 42/46 (91%), Positives = 45/46 (97%)
 Frame = +3

Query: 3   KVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFIPRDGCLNHIEENDE 140
           KVGVEAKQPNSAIRKCVRVQLIKNGKK+TAF+PRDG LN+IEENDE
Sbjct: 54  KVGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPRDGSLNYIEENDE 99



 Score = 77.4 bits (182), Expect = 6e-15
 Identities = 36/37 (97%), Positives = 37/37 (100%)
 Frame = +2

Query: 146 VAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKEKR 256
           VAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKEK+
Sbjct: 102 VAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKEKK 138


>AE013599-1845|AAF58277.2|  143|Drosophila melanogaster CG8415-PA
           protein.
          Length = 143

 Score = 93.5 bits (222), Expect = 9e-20
 Identities = 42/46 (91%), Positives = 45/46 (97%)
 Frame = +3

Query: 3   KVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFIPRDGCLNHIEENDE 140
           KVGVEAKQPNSAIRKCVRVQLIKNGKK+TAF+PRDG LN+IEENDE
Sbjct: 54  KVGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPRDGSLNYIEENDE 99



 Score = 77.4 bits (182), Expect = 6e-15
 Identities = 36/37 (97%), Positives = 37/37 (100%)
 Frame = +2

Query: 146 VAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKEKR 256
           VAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKEK+
Sbjct: 102 VAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKEKK 138


>M19494-1|AAA28935.1|  140|Drosophila melanogaster protein (
           D.melanogaster tko (technical knockout) locus mRNA
           encoding tko gene product,complete cds. ).
          Length = 140

 Score = 34.3 bits (75), Expect = 0.056
 Identities = 17/30 (56%), Positives = 22/30 (73%)
 Frame = +3

Query: 21  KQPNSAIRKCVRVQLIKNGKKVTAFIPRDG 110
           K+PNSA RKCV V+L   GK++ A+IP  G
Sbjct: 71  KKPNSANRKCVLVRL-STGKEMVAYIPGIG 99


>BT015958-1|AAV36843.1|  140|Drosophila melanogaster RH56553p
           protein.
          Length = 140

 Score = 34.3 bits (75), Expect = 0.056
 Identities = 17/30 (56%), Positives = 22/30 (73%)
 Frame = +3

Query: 21  KQPNSAIRKCVRVQLIKNGKKVTAFIPRDG 110
           K+PNSA RKCV V+L   GK++ A+IP  G
Sbjct: 71  KKPNSANRKCVLVRL-STGKEMVAYIPGIG 99


>AL133505-2|CAB65841.1|  140|Drosophila melanogaster
           EG:BACH59J11.1,FBgn0003714;tko protein.
          Length = 140

 Score = 34.3 bits (75), Expect = 0.056
 Identities = 17/30 (56%), Positives = 22/30 (73%)
 Frame = +3

Query: 21  KQPNSAIRKCVRVQLIKNGKKVTAFIPRDG 110
           K+PNSA RKCV V+L   GK++ A+IP  G
Sbjct: 71  KKPNSANRKCVLVRL-STGKEMVAYIPGIG 99


>AL133505-1|CAB63528.1|  154|Drosophila melanogaster
           EG:BACH59J11.1,FBgn0003714;tko protein.
          Length = 154

 Score = 34.3 bits (75), Expect = 0.056
 Identities = 17/30 (56%), Positives = 22/30 (73%)
 Frame = +3

Query: 21  KQPNSAIRKCVRVQLIKNGKKVTAFIPRDG 110
           K+PNSA RKCV V+L   GK++ A+IP  G
Sbjct: 85  KKPNSANRKCVLVRL-STGKEMVAYIPGIG 113


>AE014298-399|AAF45781.1|  140|Drosophila melanogaster CG7925-PB
           protein.
          Length = 140

 Score = 34.3 bits (75), Expect = 0.056
 Identities = 17/30 (56%), Positives = 22/30 (73%)
 Frame = +3

Query: 21  KQPNSAIRKCVRVQLIKNGKKVTAFIPRDG 110
           K+PNSA RKCV V+L   GK++ A+IP  G
Sbjct: 71  KKPNSANRKCVLVRL-STGKEMVAYIPGIG 99


>AJ250320-1|CAB65721.1|  140|Drosophila melanogaster technical
           knockout protein protein.
          Length = 140

 Score = 31.5 bits (68), Expect = 0.40
 Identities = 16/30 (53%), Positives = 21/30 (70%)
 Frame = +3

Query: 21  KQPNSAIRKCVRVQLIKNGKKVTAFIPRDG 110
           K+PNSA RKCV V+    GK++ A+IP  G
Sbjct: 71  KKPNSANRKCVLVR-HSTGKEMVAYIPGIG 99


>AY047577-1|AAK77309.1|  357|Drosophila melanogaster GH08848p
           protein.
          Length = 357

 Score = 27.1 bits (57), Expect = 8.5
 Identities = 23/61 (37%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
 Frame = -1

Query: 204 LKRTPGMSPTA*PLRPNPATSIRRFLRCGLGNRHGG*MRSLSFR-S**AVHGRICGWQSW 28
           +K  P   PTA  L  +P     +  R  L N     M S SFR S  AV GR+C W++ 
Sbjct: 156 MKPDPAQRPTAEQLLSHPKLQYLQKKRKSLMNFS---MLSRSFRRSRRAVWGRMCNWKTA 212

Query: 27  A 25
           A
Sbjct: 213 A 213


>AF215861-1|AAF32288.1|  534|Drosophila melanogaster Myt1
           kinase-like protein protein.
          Length = 534

 Score = 27.1 bits (57), Expect = 8.5
 Identities = 23/61 (37%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
 Frame = -1

Query: 204 LKRTPGMSPTA*PLRPNPATSIRRFLRCGLGNRHGG*MRSLSFR-S**AVHGRICGWQSW 28
           +K  P   PTA  L  +P     +  R  L N     M S SFR S  AV GR+C W++ 
Sbjct: 332 MKPDPAQRPTAEQLLSHPKLQYLQKKRKSLMNFS---MLSRSFRRSRRAVWGRMCNWKTA 388

Query: 27  A 25
           A
Sbjct: 389 A 389


>AE014296-1005|AAF50747.3|  533|Drosophila melanogaster CG32417-PA
           protein.
          Length = 533

 Score = 27.1 bits (57), Expect = 8.5
 Identities = 23/61 (37%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
 Frame = -1

Query: 204 LKRTPGMSPTA*PLRPNPATSIRRFLRCGLGNRHGG*MRSLSFR-S**AVHGRICGWQSW 28
           +K  P   PTA  L  +P     +  R  L N     M S SFR S  AV GR+C W++ 
Sbjct: 332 MKPDPAQRPTAEQLLSHPKLQYLQKKRKSLMNFS---MLSRSFRRSRRAVWGRMCNWKTA 388

Query: 27  A 25
           A
Sbjct: 389 A 389


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,165,672
Number of Sequences: 53049
Number of extensions: 303400
Number of successful extensions: 1006
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 791
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1006
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1066083345
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)