Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30697
         (387 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70684-7|CAA94601.1|  143|Caenorhabditis elegans Hypothetical pr...    93   5e-20
Z92838-1|CAB07406.1|  157|Caenorhabditis elegans Hypothetical pr...    30   0.49 
Z81128-8|CAB03402.1|  811|Caenorhabditis elegans Hypothetical pr...    27   4.6  
Z78410-2|CAB01636.2|  327|Caenorhabditis elegans Hypothetical pr...    27   4.6  
AL132898-6|CAC14409.1|  187|Caenorhabditis elegans Hypothetical ...    27   6.1  
AL132898-5|CAC14408.1|  316|Caenorhabditis elegans Hypothetical ...    27   6.1  
Z93373-2|CAN99669.1| 1671|Caenorhabditis elegans Hypothetical pr...    26   8.1  
Z93373-1|CAB07551.1| 1601|Caenorhabditis elegans Hypothetical pr...    26   8.1  

>Z70684-7|CAA94601.1|  143|Caenorhabditis elegans Hypothetical
           protein F28D1.7 protein.
          Length = 143

 Score = 93.5 bits (222), Expect = 5e-20
 Identities = 40/46 (86%), Positives = 44/46 (95%)
 Frame = +3

Query: 3   KVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFIPRDGCLNHIEENDE 140
           K+GVEAKQPNSAIRKCVRVQLIKNGKK+TAF+P DGCLN +EENDE
Sbjct: 54  KIGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFVEENDE 99



 Score = 66.9 bits (156), Expect = 5e-12
 Identities = 29/37 (78%), Positives = 34/37 (91%)
 Frame = +2

Query: 146 VAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKEKR 256
           V+GFGR GHAVGDIPGVRFK+VKVAN SL+AL+K K+
Sbjct: 102 VSGFGRSGHAVGDIPGVRFKIVKVANTSLIALFKGKK 138


>Z92838-1|CAB07406.1|  157|Caenorhabditis elegans Hypothetical
           protein T03D8.2 protein.
          Length = 157

 Score = 30.3 bits (65), Expect = 0.49
 Identities = 16/40 (40%), Positives = 26/40 (65%)
 Frame = +3

Query: 21  KQPNSAIRKCVRVQLIKNGKKVTAFIPRDGCLNHIEENDE 140
           K+PNS  RKC  V+L   G +V A+IP  G  ++++E+ +
Sbjct: 89  KKPNSGNRKCAIVRL-STGAEVCAYIPNVG--HNLQEHSQ 125


>Z81128-8|CAB03402.1|  811|Caenorhabditis elegans Hypothetical
           protein T23D8.9a protein.
          Length = 811

 Score = 27.1 bits (57), Expect = 4.6
 Identities = 10/16 (62%), Positives = 13/16 (81%)
 Frame = +3

Query: 87  TAFIPRDGCLNHIEEN 134
           T F+P+DG LN I+EN
Sbjct: 653 TPFVPKDGVLNVIDEN 668


>Z78410-2|CAB01636.2|  327|Caenorhabditis elegans Hypothetical
           protein C51E3.2 protein.
          Length = 327

 Score = 27.1 bits (57), Expect = 4.6
 Identities = 14/40 (35%), Positives = 19/40 (47%)
 Frame = -3

Query: 385 FFFFFCCTQYLLCTRILHFMNL*TTRFPTAGHLSQCTPMI 266
           FFFFFC    ++   I+    + T RF +  HL  C   I
Sbjct: 14  FFFFFCSVIGVIGNVIMVICTIRTKRFRSPCHLLICATCI 53


>AL132898-6|CAC14409.1|  187|Caenorhabditis elegans Hypothetical
           protein Y59A8B.9 protein.
          Length = 187

 Score = 26.6 bits (56), Expect = 6.1
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = -1

Query: 207 TLKRTPGMSPTA*PLRPNPATS 142
           T  RTP  +P A P RP P+ S
Sbjct: 38  TTMRTPAATPAAPPTRPTPSRS 59


>AL132898-5|CAC14408.1|  316|Caenorhabditis elegans Hypothetical
           protein Y59A8B.7 protein.
          Length = 316

 Score = 26.6 bits (56), Expect = 6.1
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = -1

Query: 207 TLKRTPGMSPTA*PLRPNPATS 142
           T  RTP  +P A P RP P+ S
Sbjct: 167 TTMRTPAATPAAPPTRPTPSRS 188


>Z93373-2|CAN99669.1| 1671|Caenorhabditis elegans Hypothetical protein
            C01B9.1b protein.
          Length = 1671

 Score = 26.2 bits (55), Expect = 8.1
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = -3

Query: 379  FFFCCTQYLLCTRILHFMNL*TTRFPTAGH 290
            F FC + +L   ++ HFMN  TT F  A H
Sbjct: 1198 FQFCLSTFLTKVKLQHFMNF-TTEFIFAIH 1226


>Z93373-1|CAB07551.1| 1601|Caenorhabditis elegans Hypothetical protein
            C01B9.1a protein.
          Length = 1601

 Score = 26.2 bits (55), Expect = 8.1
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = -3

Query: 379  FFFCCTQYLLCTRILHFMNL*TTRFPTAGH 290
            F FC + +L   ++ HFMN  TT F  A H
Sbjct: 1128 FQFCLSTFLTKVKLQHFMNF-TTEFIFAIH 1156


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,382,120
Number of Sequences: 27780
Number of extensions: 157880
Number of successful extensions: 348
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 342
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 348
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 576961812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)