Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30692
         (666 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    25   0.56 
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    25   0.74 
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    23   3.0  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    22   5.2  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   9.1  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   9.1  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   9.1  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   9.1  

>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 25.0 bits (52), Expect = 0.56
 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
 Frame = -1

Query: 207 TLRSVYHSSKGKPKYKVLSSCPLN--NFEEYVEQQVEL 100
           TL   + SSK K  Y ++S C  N  +F +  EQ VE+
Sbjct: 90  TLSPAFTSSKIKNMYSLISECAENFVDFFQGREQDVEI 127


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 24.6 bits (51), Expect = 0.74
 Identities = 9/27 (33%), Positives = 19/27 (70%)
 Frame = -2

Query: 338 LVVKYEGAILEHDINSAAFLFEINDFH 258
           L++++EG + E    +AA+LF+ + F+
Sbjct: 363 LLLRHEGVLAEAHSTNAAYLFQKDKFY 389


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = -2

Query: 239 WVNFQKNLQF*P*DQFTTAVKENQNT 162
           W+   + + F   D+FT  +K+ QNT
Sbjct: 515 WLFRDQKIMFIELDKFTVNLKQGQNT 540


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +1

Query: 568 SSMPSL*SSDNLPTSTLSFIKNSTTCVPTQTS 663
           SS+P+  +S + PT +   +  S + VPT  S
Sbjct: 82  SSLPTQRTSTSNPTYSSRSVMTSCSSVPTTAS 113


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = -3

Query: 493  LFLIKPWGTFHYRKCIHLLFLW 428
            +FLI   G+F    C+H    W
Sbjct: 1006 IFLIAMTGSFFIAACLHPQEFW 1027


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = -3

Query: 493  LFLIKPWGTFHYRKCIHLLFLW 428
            +FLI   G+F    C+H    W
Sbjct: 1006 IFLIAMTGSFFIAACLHPQEFW 1027


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = -3

Query: 493  LFLIKPWGTFHYRKCIHLLFLW 428
            +FLI   G+F    C+H    W
Sbjct: 1006 IFLIAMTGSFFIAACLHPQEFW 1027


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = -3

Query: 493  LFLIKPWGTFHYRKCIHLLFLW 428
            +FLI   G+F    C+H    W
Sbjct: 1006 IFLIAMTGSFFIAACLHPQEFW 1027


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,007
Number of Sequences: 336
Number of extensions: 3476
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17281430
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)