Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30692
         (666 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0389 - 2915191-2915604,2915696-2915752,2915867-2915922,291...    29   3.3  
03_05_1065 + 30061588-30061883,30061995-30062056,30062196-300622...    29   3.3  
03_05_0725 + 27155736-27155746,27155798-27155949,27156108-271580...    29   4.4  
06_03_1397 - 29861108-29861206,29861683-29861748,29862066-298621...    28   7.7  

>07_01_0389 -
           2915191-2915604,2915696-2915752,2915867-2915922,
           2916053-2916113,2916243-2916365,2916505-2916537,
           2916617-2916709,2916839-2916934,2917025-2917203,
           2917344-2917530,2918051-2918184,2918311-2918518,
           2918598-2918633,2918785-2919241,2919633-2919736,
           2920489-2920569,2920646-2920697,2920837-2920876,
           2920991-2921085,2921241-2921383,2921899-2922006,
           2922120-2922221,2922302-2922348,2922425-2922554,
           2923173-2923304,2923404-2923616,2923709-2923963,
           2924053-2924799
          Length = 1460

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 16/32 (50%), Positives = 20/32 (62%), Gaps = 3/32 (9%)
 Frame = -2

Query: 656 WVGTHVVEF--LIKLNVDVGRLSELY-SDGIE 570
           WVG HV EF  +   ++D G LS+ Y  DGIE
Sbjct: 626 WVGEHVAEFDTVFLADLDDGELSKKYVCDGIE 657


>03_05_1065 + 30061588-30061883,30061995-30062056,30062196-30062276,
            30062391-30062464,30062547-30062629,30063044-30063147,
            30063526-30063665,30063736-30063783,30063939-30063991,
            30064178-30064262,30064346-30064412,30064496-30064606,
            30065262-30065283,30066244-30071110,30071186-30071374,
            30071463-30071577,30072329-30073388,30074247-30074694,
            30074966-30075019,30075105-30076898,30076989-30077949,
            30078271-30078384,30078459-30078613,30078934-30079026,
            30079341-30079613,30093423-30093975,30094465-30094540,
            30094619-30094718
          Length = 4025

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 11/29 (37%), Positives = 23/29 (79%)
 Frame = -2

Query: 386  HDVLVNEKLKRDLLAFLVVKYEGAILEHD 300
            H +  ++++++++L  L +KYEGA+L+HD
Sbjct: 1661 HPLSSSDEMEKEMLT-LNIKYEGALLKHD 1688


>03_05_0725 + 27155736-27155746,27155798-27155949,27156108-27158068,
            27159169-27159397,27159506-27159634,27159725-27159838,
            27160059-27160258,27160301-27160599,27160713-27160923,
            27161017-27161172,27161290-27161447,27161532-27161724,
            27162015-27162406,27162537-27162717,27162802-27163031,
            27163108-27163753,27163833-27163902,27163994-27164244
          Length = 1860

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
 Frame = +2

Query: 65   LLVTDPLHSFLNNSTCCSTYSSKLF--NGQEERTLYFGFP 178
            LLV +PL +FL+    C    S+++  NG +E  L   FP
Sbjct: 978  LLVNNPLDNFLDGPDSCEKILSEIYETNGSKEAVLNVLFP 1017


>06_03_1397 -
           29861108-29861206,29861683-29861748,29862066-29862155,
           29862604-29862652,29862820-29862950,29863989-29864087,
           29864169-29864204,29864467-29864557,29864814-29864994,
           29865063-29865150,29865222-29865335
          Length = 347

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 14/36 (38%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
 Frame = -1

Query: 234 QFPEKSPILTLRSVYH-SSKGKPKYKVLSSCPLNNF 130
           QFP+  P+LTL S  H +++G P    + S P+N++
Sbjct: 301 QFPKHQPVLTLESSQHFNAQGLP----IMSAPVNDY 332


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,015,408
Number of Sequences: 37544
Number of extensions: 324108
Number of successful extensions: 667
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 649
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 667
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1679486824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)