Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30692
(666 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U19178-1|AAA64186.1| 277|Homo sapiens Hin-3 protein. 56 2e-07
L38616-1|AAA64231.1| 383|Homo sapiens brain and reproductive or... 56 2e-07
BC001251-1|AAH01251.1| 383|Homo sapiens brain and reproductive ... 56 2e-07
AY438031-1|AAR30499.1| 383|Homo sapiens BRCA1/BRCA2-containing ... 56 2e-07
AK123076-1|BAC85532.1| 392|Homo sapiens protein ( Homo sapiens ... 56 2e-07
AK000097-1|BAA90943.1| 415|Homo sapiens protein ( Homo sapiens ... 56 2e-07
AF420605-1|AAL17818.1| 379|Homo sapiens BRE alpha a' isoform pr... 56 2e-07
AF420603-2|AAL17816.1| 376|Homo sapiens BRE beta b isoform prot... 56 2e-07
AF420602-1|AAL17814.1| 376|Homo sapiens BRE alpha b isoform pro... 56 2e-07
AF015767-1|AAB69387.1| 383|Homo sapiens brain and reproductive ... 56 2e-07
>U19178-1|AAA64186.1| 277|Homo sapiens Hin-3 protein.
Length = 277
Score = 55.6 bits (128), Expect = 2e-07
Identities = 35/126 (27%), Positives = 57/126 (45%), Gaps = 7/126 (5%)
Frame = -2
Query: 656 WVGTHVVEFLIKLNVDVGRLSELYSDGIEENPGH*HSIVTSEISKLDKC----KLILSPL 489
W G FL+KL VD + + E+PG ++++ + KL LSP
Sbjct: 27 WTGEFSARFLLKLPVDFSNIPTYLLKDVNEDPGEDVALLSVSFEDTEATQVYPKLYLSPR 86
Query: 488 LNKALGNIS---LPQMHPSTVLMDYVPMVTELLNRKIHDVLVNEKLKRDLLAFLVVKYEG 318
+ ALG S +P L+DYVP V LL K+ V+ +R+ +A + +
Sbjct: 87 IEHALGGSSALHIPAFPGGGCLIDYVPQVCHLLTNKVQYVIQGYHKRREYIAAFLSHFGT 146
Query: 317 AILEHD 300
++E+D
Sbjct: 147 GVVEYD 152
>L38616-1|AAA64231.1| 383|Homo sapiens brain and reproductive
organ-expressed protein protein.
Length = 383
Score = 55.6 bits (128), Expect = 2e-07
Identities = 35/126 (27%), Positives = 57/126 (45%), Gaps = 7/126 (5%)
Frame = -2
Query: 656 WVGTHVVEFLIKLNVDVGRLSELYSDGIEENPGH*HSIVTSEISKLDKC----KLILSPL 489
W G FL+KL VD + + E+PG ++++ + KL LSP
Sbjct: 165 WTGEFSARFLLKLPVDFSNIPTYLLKDVNEDPGEDVALLSVSFEDTEATQVYPKLYLSPR 224
Query: 488 LNKALGNIS---LPQMHPSTVLMDYVPMVTELLNRKIHDVLVNEKLKRDLLAFLVVKYEG 318
+ ALG S +P L+DYVP V LL K+ V+ +R+ +A + +
Sbjct: 225 IEHALGGSSALHIPAFPGGGCLIDYVPQVCHLLTNKVQYVIQGYHKRREYIAAFLSHFGT 284
Query: 317 AILEHD 300
++E+D
Sbjct: 285 GVVEYD 290
>BC001251-1|AAH01251.1| 383|Homo sapiens brain and reproductive
organ-expressed (TNFRSF1A modulator) protein.
Length = 383
Score = 55.6 bits (128), Expect = 2e-07
Identities = 35/126 (27%), Positives = 57/126 (45%), Gaps = 7/126 (5%)
Frame = -2
Query: 656 WVGTHVVEFLIKLNVDVGRLSELYSDGIEENPGH*HSIVTSEISKLDKC----KLILSPL 489
W G FL+KL VD + + E+PG ++++ + KL LSP
Sbjct: 165 WTGEFSARFLLKLPVDFSNIPTYLLKDVNEDPGEDVALLSVSFEDTEATQVYPKLYLSPR 224
Query: 488 LNKALGNIS---LPQMHPSTVLMDYVPMVTELLNRKIHDVLVNEKLKRDLLAFLVVKYEG 318
+ ALG S +P L+DYVP V LL K+ V+ +R+ +A + +
Sbjct: 225 IEHALGGSSALHIPAFPGGGCLIDYVPQVCHLLTNKVQYVIQGYHKRREYIAAFLSHFGT 284
Query: 317 AILEHD 300
++E+D
Sbjct: 285 GVVEYD 290
>AY438031-1|AAR30499.1| 383|Homo sapiens BRCA1/BRCA2-containing
complex subunit 45 protein.
Length = 383
Score = 55.6 bits (128), Expect = 2e-07
Identities = 35/126 (27%), Positives = 57/126 (45%), Gaps = 7/126 (5%)
Frame = -2
Query: 656 WVGTHVVEFLIKLNVDVGRLSELYSDGIEENPGH*HSIVTSEISKLDKC----KLILSPL 489
W G FL+KL VD + + E+PG ++++ + KL LSP
Sbjct: 165 WTGEFSARFLLKLPVDFSNIPTYLLKDVNEDPGEDVALLSVSFEDTEATQVYPKLYLSPR 224
Query: 488 LNKALGNIS---LPQMHPSTVLMDYVPMVTELLNRKIHDVLVNEKLKRDLLAFLVVKYEG 318
+ ALG S +P L+DYVP V LL K+ V+ +R+ +A + +
Sbjct: 225 IEHALGGSSALHIPAFPGGGCLIDYVPQVCHLLTNKVQYVIQGYHKRREYIAAFLSHFGT 284
Query: 317 AILEHD 300
++E+D
Sbjct: 285 GVVEYD 290
>AK123076-1|BAC85532.1| 392|Homo sapiens protein ( Homo sapiens
cDNA FLJ41081 fis, clone ADRGL2009755, highly similar
to Homo sapiens brain and reproductive organ-expressed
protein (BRE) mRNA. ).
Length = 392
Score = 55.6 bits (128), Expect = 2e-07
Identities = 35/126 (27%), Positives = 57/126 (45%), Gaps = 7/126 (5%)
Frame = -2
Query: 656 WVGTHVVEFLIKLNVDVGRLSELYSDGIEENPGH*HSIVTSEISKLDKC----KLILSPL 489
W G FL+KL VD + + E+PG ++++ + KL LSP
Sbjct: 174 WTGEFSARFLLKLPVDFSNIPTYLLKDVNEDPGEDVALLSVSFEDTEATQVYPKLYLSPR 233
Query: 488 LNKALGNIS---LPQMHPSTVLMDYVPMVTELLNRKIHDVLVNEKLKRDLLAFLVVKYEG 318
+ ALG S +P L+DYVP V LL K+ V+ +R+ +A + +
Sbjct: 234 IEHALGGSSALHIPAFPGGGCLIDYVPQVCHLLTNKVQYVIQGYHKRREYIAAFLSHFGT 293
Query: 317 AILEHD 300
++E+D
Sbjct: 294 GVVEYD 299
>AK000097-1|BAA90943.1| 415|Homo sapiens protein ( Homo sapiens
cDNA FLJ20090 fis, clone COL04151. ).
Length = 415
Score = 55.6 bits (128), Expect = 2e-07
Identities = 35/126 (27%), Positives = 57/126 (45%), Gaps = 7/126 (5%)
Frame = -2
Query: 656 WVGTHVVEFLIKLNVDVGRLSELYSDGIEENPGH*HSIVTSEISKLDKC----KLILSPL 489
W G FL+KL VD + + E+PG ++++ + KL LSP
Sbjct: 165 WTGEFSARFLLKLPVDFSNIPTYLLKDVNEDPGEDVALLSVSFEDTEATQVYPKLYLSPR 224
Query: 488 LNKALGNIS---LPQMHPSTVLMDYVPMVTELLNRKIHDVLVNEKLKRDLLAFLVVKYEG 318
+ ALG S +P L+DYVP V LL K+ V+ +R+ +A + +
Sbjct: 225 IEHALGGSSALHIPAFPGGGCLIDYVPQVCHLLTNKVQYVIQGYHKRREYIAAFLSHFGT 284
Query: 317 AILEHD 300
++E+D
Sbjct: 285 GVVEYD 290
>AF420605-1|AAL17818.1| 379|Homo sapiens BRE alpha a' isoform
protein.
Length = 379
Score = 55.6 bits (128), Expect = 2e-07
Identities = 35/126 (27%), Positives = 57/126 (45%), Gaps = 7/126 (5%)
Frame = -2
Query: 656 WVGTHVVEFLIKLNVDVGRLSELYSDGIEENPGH*HSIVTSEISKLDKC----KLILSPL 489
W G FL+KL VD + + E+PG ++++ + KL LSP
Sbjct: 165 WTGEFSARFLLKLPVDFSNIPTYLLKDVNEDPGEDVALLSVSFEDTEATQVYPKLYLSPR 224
Query: 488 LNKALGNIS---LPQMHPSTVLMDYVPMVTELLNRKIHDVLVNEKLKRDLLAFLVVKYEG 318
+ ALG S +P L+DYVP V LL K+ V+ +R+ +A + +
Sbjct: 225 IEHALGGSSALHIPAFPGGGCLIDYVPQVCHLLTNKVQYVIQGYHKRREYIAAFLSHFGT 284
Query: 317 AILEHD 300
++E+D
Sbjct: 285 GVVEYD 290
>AF420603-2|AAL17816.1| 376|Homo sapiens BRE beta b isoform
protein.
Length = 376
Score = 55.6 bits (128), Expect = 2e-07
Identities = 35/126 (27%), Positives = 57/126 (45%), Gaps = 7/126 (5%)
Frame = -2
Query: 656 WVGTHVVEFLIKLNVDVGRLSELYSDGIEENPGH*HSIVTSEISKLDKC----KLILSPL 489
W G FL+KL VD + + E+PG ++++ + KL LSP
Sbjct: 165 WTGEFSARFLLKLPVDFSNIPTYLLKDVNEDPGEDVALLSVSFEDTEATQVYPKLYLSPR 224
Query: 488 LNKALGNIS---LPQMHPSTVLMDYVPMVTELLNRKIHDVLVNEKLKRDLLAFLVVKYEG 318
+ ALG S +P L+DYVP V LL K+ V+ +R+ +A + +
Sbjct: 225 IEHALGGSSALHIPAFPGGGCLIDYVPQVCHLLTNKVQYVIQGYHKRREYIAAFLSHFGT 284
Query: 317 AILEHD 300
++E+D
Sbjct: 285 GVVEYD 290
>AF420602-1|AAL17814.1| 376|Homo sapiens BRE alpha b isoform
protein.
Length = 376
Score = 55.6 bits (128), Expect = 2e-07
Identities = 35/126 (27%), Positives = 57/126 (45%), Gaps = 7/126 (5%)
Frame = -2
Query: 656 WVGTHVVEFLIKLNVDVGRLSELYSDGIEENPGH*HSIVTSEISKLDKC----KLILSPL 489
W G FL+KL VD + + E+PG ++++ + KL LSP
Sbjct: 165 WTGEFSARFLLKLPVDFSNIPTYLLKDVNEDPGEDVALLSVSFEDTEATQVYPKLYLSPR 224
Query: 488 LNKALGNIS---LPQMHPSTVLMDYVPMVTELLNRKIHDVLVNEKLKRDLLAFLVVKYEG 318
+ ALG S +P L+DYVP V LL K+ V+ +R+ +A + +
Sbjct: 225 IEHALGGSSALHIPAFPGGGCLIDYVPQVCHLLTNKVQYVIQGYHKRREYIAAFLSHFGT 284
Query: 317 AILEHD 300
++E+D
Sbjct: 285 GVVEYD 290
>AF015767-1|AAB69387.1| 383|Homo sapiens brain and reproductive
organ-expressed protein protein.
Length = 383
Score = 55.6 bits (128), Expect = 2e-07
Identities = 35/126 (27%), Positives = 57/126 (45%), Gaps = 7/126 (5%)
Frame = -2
Query: 656 WVGTHVVEFLIKLNVDVGRLSELYSDGIEENPGH*HSIVTSEISKLDKC----KLILSPL 489
W G FL+KL VD + + E+PG ++++ + KL LSP
Sbjct: 165 WTGEFSARFLLKLPVDFSNIPTYLLKDVNEDPGEDVALLSVSFEDTEATQVYPKLYLSPR 224
Query: 488 LNKALGNIS---LPQMHPSTVLMDYVPMVTELLNRKIHDVLVNEKLKRDLLAFLVVKYEG 318
+ ALG S +P L+DYVP V LL K+ V+ +R+ +A + +
Sbjct: 225 IEHALGGSSALHIPAFPGGGCLIDYVPQVCHLLTNKVQYVIQGYHKRREYIAAFLSHFGT 284
Query: 317 AILEHD 300
++E+D
Sbjct: 285 GVVEYD 290
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,658,520
Number of Sequences: 237096
Number of extensions: 1960718
Number of successful extensions: 3159
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3007
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3159
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7535049140
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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