Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30692
         (666 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68104-2|CAA92113.1|  359|Caenorhabditis elegans Hypothetical pr...    30   1.7  
U41992-8|AAA83359.1|  754|Caenorhabditis elegans Hypothetical pr...    30   1.7  
AL132862-12|CAB60542.1|  380|Caenorhabditis elegans Hypothetical...    29   3.9  
U51994-2|AAA96065.3| 1311|Caenorhabditis elegans Hypothetical pr...    27   9.1  
AF031841-1|AAC13677.1|  601|Caenorhabditis elegans GLY7 protein.       27   9.1  
AC006774-7|AAF60620.1|  601|Caenorhabditis elegans Glycosylation...    27   9.1  

>Z68104-2|CAA92113.1|  359|Caenorhabditis elegans Hypothetical
           protein F08B12.2 protein.
          Length = 359

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
 Frame = -2

Query: 650 GTHVVEFLIKL-NVDVGRLSELYSDGIEENPGH*HSIVTSEISKLD--KCKLILSPLLN 483
           G   V+FL  + N D+ +L++   DG   +P H   I  SEI  LD  KC + L   +N
Sbjct: 258 GLFFVQFLDYMYNTDLAKLTKTGLDGAIPSPPHKMIISESEILSLDTNKCPICLKKRVN 316


>U41992-8|AAA83359.1|  754|Caenorhabditis elegans Hypothetical
           protein F32E10.1 protein.
          Length = 754

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = -1

Query: 204 LRSVYHSSKGKPKYKVLSSCPLNNFEEYVEQQVELFKNE 88
           +  ++H   G P   + ++CPLN+F  +    +  F NE
Sbjct: 294 MMKLWHEEDGSPMAAIENTCPLNDFCRFPNSGMFFFANE 332


>AL132862-12|CAB60542.1|  380|Caenorhabditis elegans Hypothetical
           protein Y73F8A.17 protein.
          Length = 380

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = +3

Query: 375 KYIVYLSVQQFGNHRYIIHKNSRW 446
           +Y+V LS+Q+F N RY   KN +W
Sbjct: 52  RYVVLLSIQKFDNIRYGF-KNGKW 74


>U51994-2|AAA96065.3| 1311|Caenorhabditis elegans Hypothetical protein
            R03G5.3 protein.
          Length = 1311

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 16/51 (31%), Positives = 27/51 (52%)
 Frame = +1

Query: 253  NQWKSLISNRKAALFISCSNMAPSYLTTKNANKSLFNFSLTSTSCIFLFSS 405
            NQ  +++   + AL +SCS   P YLT  N  K    ++L  +  +F+ S+
Sbjct: 1104 NQISNVMYANRLALLMSCSLYRPFYLTNLNYEK----YALLVSCMVFVVSN 1150


>AF031841-1|AAC13677.1|  601|Caenorhabditis elegans GLY7 protein.
          Length = 601

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 13/42 (30%), Positives = 23/42 (54%)
 Frame = -1

Query: 231 FPEKSPILTLRSVYHSSKGKPKYKVLSSCPLNNFEEYVEQQV 106
           +PEK P +++  V+H+    P  + + S  L +  E +EQ V
Sbjct: 151 YPEKLPTVSVVVVFHNEGWTPLLRTVHSVLLRSPPELIEQVV 192


>AC006774-7|AAF60620.1|  601|Caenorhabditis elegans Glycosylation
           related protein 7 protein.
          Length = 601

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 13/42 (30%), Positives = 23/42 (54%)
 Frame = -1

Query: 231 FPEKSPILTLRSVYHSSKGKPKYKVLSSCPLNNFEEYVEQQV 106
           +PEK P +++  V+H+    P  + + S  L +  E +EQ V
Sbjct: 151 YPEKLPTVSVVVVFHNEGWTPLLRTVHSVLLRSPPELIEQVV 192


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,907,841
Number of Sequences: 27780
Number of extensions: 328126
Number of successful extensions: 784
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 761
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 784
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1497472076
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)