Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30691
(672 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri... 91 2e-17
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 90 5e-17
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 88 2e-16
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 83 4e-15
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 82 1e-14
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 81 3e-14
UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 81 3e-14
UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 79 1e-13
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 79 1e-13
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 77 3e-13
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 77 3e-13
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 77 4e-13
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 76 7e-13
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 76 9e-13
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 75 2e-12
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 75 2e-12
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 74 3e-12
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 73 8e-12
UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre... 73 8e-12
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 72 1e-11
UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI... 72 1e-11
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 71 2e-11
UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ... 70 4e-11
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 69 8e-11
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 69 1e-10
UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1; Wa... 69 1e-10
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 67 4e-10
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 65 1e-09
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 64 4e-09
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 64 4e-09
UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R... 64 4e-09
UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R... 64 4e-09
UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae... 63 7e-09
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 62 2e-08
UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro... 60 4e-08
UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1; My... 59 8e-08
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 59 1e-07
UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia polym... 57 4e-07
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 56 6e-07
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 56 8e-07
UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI... 56 8e-07
UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1; Ap... 53 7e-06
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 52 2e-05
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 51 2e-05
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 51 2e-05
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 50 5e-05
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 49 9e-05
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 49 1e-04
UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1; Mu... 48 3e-04
UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1; Cela... 47 4e-04
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 45 0.001
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 44 0.003
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 44 0.004
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 44 0.004
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 43 0.006
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 43 0.006
UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia lipolyti... 43 0.008
UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7; Ec... 42 0.010
UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1; Te... 42 0.014
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 41 0.024
UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 41 0.024
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 41 0.024
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 41 0.024
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 41 0.031
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 40 0.055
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 40 0.072
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 40 0.072
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 39 0.096
UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3; Rhodobacte... 38 0.29
UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacil... 37 0.39
UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1; Pach... 37 0.51
UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1; Kluyver... 37 0.51
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 36 0.67
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 36 0.67
UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 36 1.2
UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5; Sulfol... 36 1.2
UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobac... 35 1.6
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 35 1.6
UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase polype... 35 2.1
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 35 2.1
UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5; P... 34 2.7
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 33 4.8
UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subuni... 33 4.8
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 33 4.8
UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3; Ha... 33 6.3
UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2; Eu... 33 8.3
UniRef50_Q2ABI9 Cluster: NADH-ubiquinone oxidoreductase chain 2;... 33 8.3
UniRef50_Q5ABE2 Cluster: Putative uncharacterized protein CLN3; ... 33 8.3
>UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1;
Periclimenes thermohydrophilus|Rep: Cytochrome oxidase
subunit I - Periclimenes thermohydrophilus
Length = 217
Score = 91.5 bits (217), Expect = 2e-17
Identities = 50/93 (53%), Positives = 57/93 (61%)
Frame = -3
Query: 295 KGGG*ESKSYIIYSGNAISGAPSIRGTNQFPNPPXXXXXXXXXXXXKACAVTIVL*I*SS 116
K GG + GNA+SGAP++ GTNQFPNPP KA AVT+ L I S
Sbjct: 126 KEGGSNQNLMLFIRGNAMSGAPNMSGTNQFPNPPIMIGMTMKKIITKAWAVTMTL-IWSF 184
Query: 115 PINDPGFPNSARIKSLKDVPIIPDQIPKIKYNV 17
PI PG PNSARIKSL DVP +P PK+KYNV
Sbjct: 185 PIKLPGCPNSARIKSLSDVPTMPAHAPKMKYNV 217
Score = 78.6 bits (185), Expect = 1e-13
Identities = 38/58 (65%), Positives = 45/58 (77%)
Frame = -2
Query: 671 NKC*YKIGSPPPAGSKNDVFKFRSVNNIVIAPAKTGSDNNNKNAVIPTAHTNKGIDQM 498
NKC + IGSPPPAGSK +VFKFRSV +IVIAPA TGS++N+K AV T TN G+ M
Sbjct: 1 NKC-WSIGSPPPAGSKKEVFKFRSVKSIVIAPASTGSESNSKMAVSNTDQTNSGMRSM 57
Score = 73.3 bits (172), Expect = 5e-12
Identities = 34/56 (60%), Positives = 40/56 (71%)
Frame = -1
Query: 438 DEIPAKCSEKIARSTDLPLCAILDESGG*TVHPVPAPFSTILLEINNIREGGRSQN 271
+E PAKC+EKI STD P CAI SGG TVHPVP P STI L + ++EGG +QN
Sbjct: 78 EETPAKCNEKIPMSTDAPACAIPLASGGYTVHPVPTPLSTIPLNKSKVKEGGSNQN 133
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 89.8 bits (213), Expect = 5e-17
Identities = 43/55 (78%), Positives = 45/55 (81%)
Frame = +1
Query: 508 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 672
+PLFV AVGITAF AGAIT+LLTDRNLNTSFFDPAGGGDPILYQHLF
Sbjct: 178 MPLFVWAVGITAFLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLF 232
Score = 87.8 bits (208), Expect = 2e-16
Identities = 48/88 (54%), Positives = 50/88 (56%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 430
PR+NN+ F IVENGAGTG TVYPPLSSNIAH G SVDLAIFSLHLAG
Sbjct: 92 PRMNNMSFWLLPPSLTLLISSSIVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAG 151
Query: 431 ISSXXXXXXXXXXXXXXXXXXXSFDQYP 514
ISS SFDQ P
Sbjct: 152 ISSILGAINFITTIINMRMNNLSFDQMP 179
Score = 83.0 bits (196), Expect = 6e-15
Identities = 48/98 (48%), Positives = 50/98 (51%)
Frame = +3
Query: 3 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXX 182
HKDIGTLY AELG PGSLIGDDQIYNTIVTAHA
Sbjct: 9 HKDIGTLYFIFGIWAGMVGTSLSLLIRAELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVM 68
Query: 183 XXXXXXXXN*LVPLILGAPDIAFPE*II*DFDSYPPPL 296
N LVPL+LGAPD+AFP F PP L
Sbjct: 69 PIMIGGFGNWLVPLMLGAPDMAFPRMNNMSFWLLPPSL 106
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 87.8 bits (208), Expect = 2e-16
Identities = 48/88 (54%), Positives = 50/88 (56%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 430
PR+NN+ F IVENGAGTG TVYPPLSSNIAH G SVDLAIFSLHLAG
Sbjct: 68 PRMNNMSFWLLPPSLILLISSSIVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAG 127
Query: 431 ISSXXXXXXXXXXXXXXXXXXXSFDQYP 514
ISS SFDQ P
Sbjct: 128 ISSILGAINFITTIINMRINKMSFDQMP 155
Score = 87.0 bits (206), Expect = 4e-16
Identities = 41/55 (74%), Positives = 44/55 (80%)
Frame = +1
Query: 508 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 672
+PLF+ AVGITA AGAIT+LLTDRNLNTSFFDPAGGGDPILYQHLF
Sbjct: 154 MPLFIWAVGITALLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLF 208
Score = 70.5 bits (165), Expect = 3e-11
Identities = 38/70 (54%), Positives = 41/70 (58%)
Frame = +3
Query: 87 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPE*II 266
ELG PGSLIGDDQIYNTIVTAHA N L+PL+LGAPD+AFP
Sbjct: 13 ELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPIMIGGFGNWLIPLMLGAPDMAFPRMNN 72
Query: 267 *DFDSYPPPL 296
F PP L
Sbjct: 73 MSFWLLPPSL 82
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 83.4 bits (197), Expect = 4e-15
Identities = 40/55 (72%), Positives = 43/55 (78%)
Frame = +1
Query: 508 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 672
+PLFV AV ITA AGAIT+LLTDRN+NTSFFDPAGGGDPILYQHLF
Sbjct: 100 MPLFVWAVEITAILLLLSLPVLAGAITMLLTDRNINTSFFDPAGGGDPILYQHLF 154
Score = 68.5 bits (160), Expect = 1e-10
Identities = 37/63 (58%), Positives = 41/63 (65%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 430
PR N+ F VE GAGTG TV PPLS+NIAH G SVDLAIFSLH+AG
Sbjct: 14 PRXINMSFWFLPPXLSFFLXSSXVEKGAGTGWTVSPPLSANIAHEGSSVDLAIFSLHMAG 73
Query: 431 ISS 439
+ S
Sbjct: 74 VXS 76
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 81.8 bits (193), Expect = 1e-14
Identities = 38/55 (69%), Positives = 43/55 (78%)
Frame = +1
Query: 508 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 672
+PLFV +V +TAF AGAIT+LLTDRN NT+FFDPAGGGDPILYQHLF
Sbjct: 184 LPLFVWSVLVTAFLLLLSLPVLAGAITMLLTDRNFNTTFFDPAGGGDPILYQHLF 238
Score = 69.3 bits (162), Expect = 8e-11
Identities = 34/63 (53%), Positives = 41/63 (65%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 430
PR+NNI F +VE G+GTG TVYPPLS +H G +VDLAIFSLHL+G
Sbjct: 98 PRLNNISFWLLPPSLLLLLSSALVEVGSGTGWTVYPPLSGITSHSGGAVDLAIFSLHLSG 157
Query: 431 ISS 439
+SS
Sbjct: 158 VSS 160
Score = 57.6 bits (133), Expect = 3e-07
Identities = 35/100 (35%), Positives = 43/100 (43%), Gaps = 2/100 (2%)
Frame = +3
Query: 3 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYNTIVTAHAXXXXXXX 176
HKDIGTLY EL PG I G+ Q+YN ++TAHA
Sbjct: 13 HKDIGTLYFIFGAIAGVMGTCFSVLIRMELARPGDQILGGNHQLYNVLITAHAFLMIFFM 72
Query: 177 XXXXXXXXXXN*LVPLILGAPDIAFPE*II*DFDSYPPPL 296
N VP+++GAPD+AFP F PP L
Sbjct: 73 VMPAMIGGFGNWFVPILIGAPDMAFPRLNNISFWLLPPSL 112
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 80.6 bits (190), Expect = 3e-14
Identities = 37/55 (67%), Positives = 42/55 (76%)
Frame = +1
Query: 508 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 672
+PLFV A+ +TA AGAIT+LLTDRN NTSF+DPAGGGDPILYQHLF
Sbjct: 181 LPLFVWAIFVTAILLLLSLPVLAGAITMLLTDRNFNTSFYDPAGGGDPILYQHLF 235
Score = 71.7 bits (168), Expect = 1e-11
Identities = 37/63 (58%), Positives = 40/63 (63%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 430
PR+NNI F VE GAGTG TVYPPLS +H G SVDLAIFSLHL+G
Sbjct: 95 PRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSG 154
Query: 431 ISS 439
ISS
Sbjct: 155 ISS 157
Score = 56.0 bits (129), Expect = 8e-07
Identities = 37/99 (37%), Positives = 43/99 (43%), Gaps = 2/99 (2%)
Frame = +3
Query: 6 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXX 179
KDIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 11 KDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMV 70
Query: 180 XXXXXXXXXN*LVPLILGAPDIAFPE*II*DFDSYPPPL 296
N LVP+++GAPD+AFP F PP L
Sbjct: 71 MPAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSL 109
>UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI5 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI5 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 536
Score = 80.6 bits (190), Expect = 3e-14
Identities = 37/55 (67%), Positives = 42/55 (76%)
Frame = +1
Query: 508 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 672
+PLFV A+ +TA AGAIT+LLTDRN NTSF+DPAGGGDPILYQHLF
Sbjct: 181 LPLFVWAIFVTAILLLLSLPVLAGAITMLLTDRNFNTSFYDPAGGGDPILYQHLF 235
Score = 71.7 bits (168), Expect = 1e-11
Identities = 37/63 (58%), Positives = 40/63 (63%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 430
PR+NNI F VE GAGTG TVYPPLS +H G SVDLAIFSLHL+G
Sbjct: 95 PRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSG 154
Query: 431 ISS 439
ISS
Sbjct: 155 ISS 157
Score = 56.0 bits (129), Expect = 8e-07
Identities = 37/99 (37%), Positives = 43/99 (43%), Gaps = 2/99 (2%)
Frame = +3
Query: 6 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXX 179
KDIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 11 KDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMV 70
Query: 180 XXXXXXXXXN*LVPLILGAPDIAFPE*II*DFDSYPPPL 296
N LVP+++GAPD+AFP F PP L
Sbjct: 71 MPAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSL 109
>UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Homalopoma maculosa
Length = 219
Score = 79.0 bits (186), Expect = 1e-13
Identities = 38/55 (69%), Positives = 41/55 (74%)
Frame = +1
Query: 508 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 672
+ LFV +V ITA AGAIT+LLTDRN NTSFFDPAGGGDPILYQHLF
Sbjct: 164 VSLFVWSVKITAILLLLSLPVLAGAITMLLTDRNFNTSFFDPAGGGDPILYQHLF 218
Score = 77.0 bits (181), Expect = 4e-13
Identities = 38/63 (60%), Positives = 42/63 (66%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 430
PR+NN+ F VE+GAGTG TVYPPLS N AH G SVDLAIFSLHLAG
Sbjct: 78 PRLNNMSFWFLPPSLSLLLMSAAVESGAGTGWTVYPPLSGNTAHAGPSVDLAIFSLHLAG 137
Query: 431 ISS 439
+SS
Sbjct: 138 VSS 140
Score = 64.1 bits (149), Expect = 3e-09
Identities = 34/70 (48%), Positives = 39/70 (55%)
Frame = +3
Query: 87 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPE*II 266
ELG PGS IG+DQ+YN +VTAHA N LVPL+LGAPD+AFP
Sbjct: 23 ELGQPGSFIGNDQLYNVVVTAHAFVMIFFLVMPMMIGGFGNWLVPLMLGAPDMAFPRLNN 82
Query: 267 *DFDSYPPPL 296
F PP L
Sbjct: 83 MSFWFLPPSL 92
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 79.0 bits (186), Expect = 1e-13
Identities = 37/55 (67%), Positives = 42/55 (76%)
Frame = +1
Query: 508 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 672
IPLFV ++ +TAF AGAIT+LLTDRN NTSFFD +GGGDPILYQHLF
Sbjct: 189 IPLFVWSILVTAFLLLLAVPVLAGAITMLLTDRNFNTSFFDASGGGDPILYQHLF 243
Score = 67.3 bits (157), Expect = 3e-10
Identities = 34/63 (53%), Positives = 40/63 (63%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 430
PR+NNI F +VE G GTG TVYPPLSS +H G +VDLAIFSLH++G
Sbjct: 103 PRLNNISFWLLPPSLCLLLMSALVEVGVGTGWTVYPPLSSIQSHSGGAVDLAIFSLHISG 162
Query: 431 ISS 439
SS
Sbjct: 163 ASS 165
Score = 58.0 bits (134), Expect = 2e-07
Identities = 35/100 (35%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Frame = +3
Query: 3 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXX 176
HKDIGTLY EL P + L+G+ QIYN ++TAHA
Sbjct: 18 HKDIGTLYLIFGAFSGVLGGCMSMLIRMELAQPSNHLLLGNHQIYNVLITAHAFLMIFFM 77
Query: 177 XXXXXXXXXXN*LVPLILGAPDIAFPE*II*DFDSYPPPL 296
N LVP+++G+PD+AFP F PP L
Sbjct: 78 VMPVMIGGFGNWLVPIMIGSPDMAFPRLNNISFWLLPPSL 117
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 77.4 bits (182), Expect = 3e-13
Identities = 40/84 (47%), Positives = 45/84 (53%)
Frame = +3
Query: 3 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXX 182
HKDIGTLY AELG PG+L+GDDQIYN IVTAHA
Sbjct: 13 HKDIGTLYLIFGAWAGMIGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVM 72
Query: 183 XXXXXXXXN*LVPLILGAPDIAFP 254
N LVPL++GAPD+AFP
Sbjct: 73 PIMIGGFGNWLVPLMIGAPDMAFP 96
Score = 76.2 bits (179), Expect = 7e-13
Identities = 39/63 (61%), Positives = 43/63 (68%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 430
PR+NN+ F VE GAGTG TVYPPL+ N+AH G SVDLAIFSLHLAG
Sbjct: 96 PRMNNMSFWLXPPSFLLLLASSTVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAG 155
Query: 431 ISS 439
ISS
Sbjct: 156 ISS 158
Score = 76.2 bits (179), Expect = 7e-13
Identities = 37/54 (68%), Positives = 40/54 (74%)
Frame = +1
Query: 511 PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 672
PLFV +V ITA A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF
Sbjct: 183 PLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLF 236
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 77.4 bits (182), Expect = 3e-13
Identities = 38/55 (69%), Positives = 41/55 (74%)
Frame = +1
Query: 508 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 672
IPLFV +V ITA AGAIT+LLTDR NT+FFDPAGGGDPILYQHLF
Sbjct: 182 IPLFVWSVLITAILLLLSLPVLAGAITMLLTDRYFNTTFFDPAGGGDPILYQHLF 236
Score = 73.7 bits (173), Expect = 4e-12
Identities = 37/63 (58%), Positives = 42/63 (66%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 430
PR+NNI F +VE GAGTG TVYPPL+S AH G SVD+AIFSLHLAG
Sbjct: 96 PRLNNISFWLLPPALFLLLGSSLVEQGAGTGWTVYPPLASIQAHSGGSVDMAIFSLHLAG 155
Query: 431 ISS 439
+SS
Sbjct: 156 LSS 158
Score = 69.7 bits (163), Expect = 6e-11
Identities = 38/99 (38%), Positives = 47/99 (47%)
Frame = +3
Query: 3 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXX 182
HKDIG+LY EL +PGS++GDD +YN IVTAHA
Sbjct: 13 HKDIGSLYLVFGALSGAIGTAFSMLIRLELSSPGSMLGDDHLYNVIVTAHAFVMIFFLVM 72
Query: 183 XXXXXXXXN*LVPLILGAPDIAFPE*II*DFDSYPPPLY 299
N VPL++GAPD+AFP F PP L+
Sbjct: 73 PTMIGGFGNWFVPLMIGAPDMAFPRLNNISFWLLPPALF 111
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 77.0 bits (181), Expect = 4e-13
Identities = 37/54 (68%), Positives = 40/54 (74%)
Frame = +1
Query: 511 PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 672
PLFV AV +TA A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF
Sbjct: 182 PLFVWAVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLF 235
Score = 74.9 bits (176), Expect = 2e-12
Identities = 39/84 (46%), Positives = 44/84 (52%)
Frame = +3
Query: 3 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXX 182
HKDIGTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 12 HKDIGTLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVM 71
Query: 183 XXXXXXXXN*LVPLILGAPDIAFP 254
N LVPL++GAPD+AFP
Sbjct: 72 PILIGGFGNWLVPLMIGAPDMAFP 95
Score = 72.9 bits (171), Expect = 6e-12
Identities = 36/63 (57%), Positives = 41/63 (65%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 430
PR+NN+ F VE GAGTG TVYPPL+ N+AH G SVDL IFSLHLAG
Sbjct: 95 PRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAG 154
Query: 431 ISS 439
+SS
Sbjct: 155 VSS 157
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 76.2 bits (179), Expect = 7e-13
Identities = 37/54 (68%), Positives = 40/54 (74%)
Frame = +1
Query: 511 PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 672
PLFV +V ITA A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF
Sbjct: 182 PLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLF 235
Score = 74.1 bits (174), Expect = 3e-12
Identities = 42/98 (42%), Positives = 48/98 (48%)
Frame = +3
Query: 3 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXX 182
HKDIGTLY AELG PG+L+G+D IYN IVTAHA
Sbjct: 12 HKDIGTLYLLFGAWAGVLGTALSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMIFFMVM 71
Query: 183 XXXXXXXXN*LVPLILGAPDIAFPE*II*DFDSYPPPL 296
N LVPL++GAPD+AFP F PP L
Sbjct: 72 PIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSL 109
Score = 72.1 bits (169), Expect = 1e-11
Identities = 35/63 (55%), Positives = 41/63 (65%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 430
PR+NN+ F +VE GAGTG TVYPPL+ N +H G SVDL IFSLHLAG
Sbjct: 95 PRMNNMSFWLLPPSLLLLLASAMVEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLAG 154
Query: 431 ISS 439
+SS
Sbjct: 155 VSS 157
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 75.8 bits (178), Expect = 9e-13
Identities = 36/54 (66%), Positives = 40/54 (74%)
Frame = +1
Query: 511 PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 672
PLFV +V +TA A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF
Sbjct: 182 PLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLF 235
Score = 74.9 bits (176), Expect = 2e-12
Identities = 39/84 (46%), Positives = 44/84 (52%)
Frame = +3
Query: 3 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXX 182
HKDIGTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 12 HKDIGTLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVM 71
Query: 183 XXXXXXXXN*LVPLILGAPDIAFP 254
N LVPL++GAPD+AFP
Sbjct: 72 PVMIGGFGNWLVPLMIGAPDMAFP 95
Score = 72.9 bits (171), Expect = 6e-12
Identities = 36/63 (57%), Positives = 41/63 (65%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 430
PR+NN+ F VE GAGTG TVYPPL+ N+AH G SVDL IFSLHLAG
Sbjct: 95 PRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAG 154
Query: 431 ISS 439
+SS
Sbjct: 155 VSS 157
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 74.9 bits (176), Expect = 2e-12
Identities = 36/53 (67%), Positives = 40/53 (75%)
Frame = +1
Query: 514 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 672
LF +V ITA AGAIT+LLTDRN+NTSFFDP+GGGDPILYQHLF
Sbjct: 167 LFSWSVFITAILLLLSLPVLAGAITMLLTDRNMNTSFFDPSGGGDPILYQHLF 219
Score = 63.3 bits (147), Expect = 5e-09
Identities = 32/63 (50%), Positives = 36/63 (57%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 430
PR+NN+ F + G GTG TVYPPLS + H G SVDL IFSLHLAG
Sbjct: 79 PRMNNMSFWLLIPSLLLLILSMFINVGVGTGWTVYPPLSLILGHGGMSVDLGIFSLHLAG 138
Query: 431 ISS 439
SS
Sbjct: 139 ASS 141
Score = 61.7 bits (143), Expect = 2e-08
Identities = 29/56 (51%), Positives = 37/56 (66%)
Frame = +3
Query: 87 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFP 254
ELG PGSLIG+DQIYN+IVT+HA N L+PL+LG+PD++FP
Sbjct: 24 ELGMPGSLIGNDQIYNSIVTSHAFIMIFFMVMPVMIGGFGNWLIPLMLGSPDMSFP 79
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 74.5 bits (175), Expect = 2e-12
Identities = 38/84 (45%), Positives = 44/84 (52%)
Frame = +3
Query: 3 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXX 182
HKDIGTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 1 HKDIGTLYLIFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVM 60
Query: 183 XXXXXXXXN*LVPLILGAPDIAFP 254
N L+PL++GAPD+AFP
Sbjct: 61 PIMIGGFGNWLIPLMIGAPDMAFP 84
Score = 72.9 bits (171), Expect = 6e-12
Identities = 36/63 (57%), Positives = 41/63 (65%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 430
PR+NN+ F +E GAGTG TVYPPL+ N+AH G SVDL IFSLHLAG
Sbjct: 84 PRMNNMSFWLLPPSFLLLLASSGIEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAG 143
Query: 431 ISS 439
ISS
Sbjct: 144 ISS 146
Score = 48.0 bits (109), Expect = 2e-04
Identities = 25/41 (60%), Positives = 27/41 (65%)
Frame = +1
Query: 511 PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP 633
PLFV AV ITA A IT+LLTDRNLNT+FFDP
Sbjct: 171 PLFVWAVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDP 211
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 74.1 bits (174), Expect = 3e-12
Identities = 33/55 (60%), Positives = 41/55 (74%)
Frame = +1
Query: 508 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 672
+PLF +V +TA+ AGAIT+LLTDRN T+FFDPAGGGDPIL+QH+F
Sbjct: 287 VPLFAWSVFVTAWLLLLSLPVLAGAITMLLTDRNFGTTFFDPAGGGDPILFQHIF 341
Score = 52.8 bits (121), Expect = 7e-06
Identities = 23/63 (36%), Positives = 36/63 (57%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 430
PR+NN+ + +++ GAG G T YPP+S+ R+VD AIF++H++G
Sbjct: 201 PRLNNLSYWMYVAGTCLAFCSVMIDGGAGPGWTFYPPISAQGVETSRAVDFAIFAVHVSG 260
Query: 431 ISS 439
SS
Sbjct: 261 ASS 263
Score = 34.7 bits (76), Expect = 2.1
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Frame = +3
Query: 84 AELGNPGSLIG--DDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFP 254
A LG L G D ++N ++T H N +PL++GAPD+AFP
Sbjct: 143 ALLGTMDQLDGNPDGHLWNVLITGHGVLMMFFVVIPALFGGFGNYFMPLMIGAPDMAFP 201
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 72.5 bits (170), Expect = 8e-12
Identities = 38/63 (60%), Positives = 41/63 (65%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 430
PRINNI F +VE+GAGTG TVYPPLSS AH G SVDLAIF+LHL
Sbjct: 96 PRINNIAFWVLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHLTS 155
Query: 431 ISS 439
ISS
Sbjct: 156 ISS 158
Score = 68.1 bits (159), Expect = 2e-10
Identities = 31/55 (56%), Positives = 39/55 (70%)
Frame = +1
Query: 508 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 672
+PLFV ++ ITAF + IT+LL DRN NTSFF+ +GGGDPILY+HLF
Sbjct: 182 LPLFVWSIFITAFLLLLSLPVLSAGITMLLLDRNFNTSFFEVSGGGDPILYEHLF 236
Score = 41.9 bits (94), Expect = 0.014
Identities = 27/85 (31%), Positives = 34/85 (40%), Gaps = 2/85 (2%)
Frame = +3
Query: 6 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXX 179
KDI LY EL PGS L G+ Q++N +V HA
Sbjct: 12 KDIAVLYFMLAIFSGMAGTAMSLIIRLELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLV 71
Query: 180 XXXXXXXXXN*LVPLILGAPDIAFP 254
N L+PL++GA D AFP
Sbjct: 72 MPALIGGFGNYLLPLMIGATDTAFP 96
>UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4
precursor (DNA endonuclease I- SceII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI4 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceII)]; n=4; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI4 precursor (DNA
endonuclease I- SceII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 556
Score = 72.5 bits (170), Expect = 8e-12
Identities = 38/63 (60%), Positives = 41/63 (65%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 430
PRINNI F +VE+GAGTG TVYPPLSS AH G SVDLAIF+LHL
Sbjct: 96 PRINNIAFWVLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHLTS 155
Query: 431 ISS 439
ISS
Sbjct: 156 ISS 158
Score = 68.1 bits (159), Expect = 2e-10
Identities = 31/55 (56%), Positives = 39/55 (70%)
Frame = +1
Query: 508 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 672
+PLFV ++ ITAF + IT+LL DRN NTSFF+ +GGGDPILY+HLF
Sbjct: 182 LPLFVWSIFITAFLLLLSLPVLSAGITMLLLDRNFNTSFFEVSGGGDPILYEHLF 236
Score = 41.9 bits (94), Expect = 0.014
Identities = 27/85 (31%), Positives = 34/85 (40%), Gaps = 2/85 (2%)
Frame = +3
Query: 6 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXX 179
KDI LY EL PGS L G+ Q++N +V HA
Sbjct: 12 KDIAVLYFMLAIFSGMAGTAMSLIIRLELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLV 71
Query: 180 XXXXXXXXXN*LVPLILGAPDIAFP 254
N L+PL++GA D AFP
Sbjct: 72 MPALIGGFGNYLLPLMIGATDTAFP 96
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 71.7 bits (168), Expect = 1e-11
Identities = 32/55 (58%), Positives = 39/55 (70%)
Frame = +1
Query: 508 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 672
+PLFV +V +T+F A AIT+LL DRN NTSF+DP GGGD +LYQHLF
Sbjct: 185 LPLFVWSVAVTSFLVIVAIPVLAAAITLLLFDRNFNTSFYDPVGGGDVVLYQHLF 239
Score = 61.7 bits (143), Expect = 2e-08
Identities = 32/63 (50%), Positives = 34/63 (53%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 430
PR+NN F E G GTG TVYPPLSS +H G SVDL IFS HL G
Sbjct: 99 PRLNNFSFWLLPGAILLAVLATYSEGGPGTGWTVYPPLSSLQSHSGASVDLMIFSFHLVG 158
Query: 431 ISS 439
I S
Sbjct: 159 IGS 161
Score = 42.3 bits (95), Expect = 0.010
Identities = 26/86 (30%), Positives = 32/86 (37%), Gaps = 2/86 (2%)
Frame = +3
Query: 3 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXX 176
HK IG LY EL PG L G+ YN I T H
Sbjct: 14 HKRIGILYLFFGVFNGFLAVLLSMLMRLELAFPGDQILFGEYHFYNMITTVHGVLMLFVV 73
Query: 177 XXXXXXXXXXN*LVPLILGAPDIAFP 254
N VP+++GAPD++FP
Sbjct: 74 VMPILFGGFGNYFVPILIGAPDMSFP 99
>UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI4
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI4 (EC
3.1.-.-)]; n=3; Basidiomycota|Rep: Probable
intron-encoded endonuclease aI4 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI4 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 530
Score = 71.7 bits (168), Expect = 1e-11
Identities = 37/63 (58%), Positives = 40/63 (63%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 430
PR+NNI F VE GAGTG TVYPPLS +H G SVDLAIFSLHL+G
Sbjct: 95 PRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSG 154
Query: 431 ISS 439
ISS
Sbjct: 155 ISS 157
Score = 56.0 bits (129), Expect = 8e-07
Identities = 37/99 (37%), Positives = 43/99 (43%), Gaps = 2/99 (2%)
Frame = +3
Query: 6 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXX 179
KDIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 11 KDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMV 70
Query: 180 XXXXXXXXXN*LVPLILGAPDIAFPE*II*DFDSYPPPL 296
N LVP+++GAPD+AFP F PP L
Sbjct: 71 MPAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSL 109
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 71.3 bits (167), Expect = 2e-11
Identities = 38/63 (60%), Positives = 41/63 (65%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 430
PRIN+I F +VE+GAGTG TVYPPLSS AH G SVDLAIFSLHL
Sbjct: 96 PRINSIGFWLLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFSLHLTS 155
Query: 431 ISS 439
ISS
Sbjct: 156 ISS 158
Score = 67.7 bits (158), Expect = 2e-10
Identities = 32/55 (58%), Positives = 37/55 (67%)
Frame = +1
Query: 508 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 672
+PLFV A+ ITAF + IT+LL DRN NTSFF+ AGGGDPI YQH F
Sbjct: 182 MPLFVWAIFITAFLLLLSLPVLSAGITMLLMDRNFNTSFFEVAGGGDPIFYQHAF 236
Score = 39.5 bits (88), Expect = 0.072
Identities = 24/85 (28%), Positives = 35/85 (41%), Gaps = 2/85 (2%)
Frame = +3
Query: 6 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXX 179
KDI +Y EL PGS L G+ Q++N +V HA
Sbjct: 12 KDISIMYFMLALFSGMAGSAMSMIIRMELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLA 71
Query: 180 XXXXXXXXXN*LVPLILGAPDIAFP 254
N ++PL++GA D++FP
Sbjct: 72 MPALIGGFGNYMLPLMIGATDMSFP 96
>UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein;
n=1; Saccharomyces castellii|Rep: I-SceII DNA
endonuclease-like protein - Saccharomyces castellii
(Yeast)
Length = 598
Score = 70.1 bits (164), Expect = 4e-11
Identities = 36/63 (57%), Positives = 41/63 (65%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 430
PRINNI F +VE+GAGTG TVYPPL+S AH G SVDLAIF+LH+
Sbjct: 96 PRINNIGFWLLPMGLVCLVTSTLVESGAGTGWTVYPPLASIQAHSGPSVDLAIFALHMTS 155
Query: 431 ISS 439
ISS
Sbjct: 156 ISS 158
Score = 66.9 bits (156), Expect = 4e-10
Identities = 31/55 (56%), Positives = 38/55 (69%)
Frame = +1
Query: 508 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 672
+PLFV A+ ITA + +T+LL DRN NTSFF+ AGGGDPILY+HLF
Sbjct: 182 LPLFVWAILITAVLLLLTLPVLSAGVTMLLLDRNFNTSFFEVAGGGDPILYEHLF 236
Score = 39.9 bits (89), Expect = 0.055
Identities = 25/85 (29%), Positives = 34/85 (40%), Gaps = 2/85 (2%)
Frame = +3
Query: 6 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXX 179
KDI LY EL PG L G++Q++N +V HA
Sbjct: 12 KDIAVLYFLLALFSGMAGTAMSLIIRLELAAPGQQYLHGNNQLFNVLVVGHAILMIFFMV 71
Query: 180 XXXXXXXXXN*LVPLILGAPDIAFP 254
N ++PL++GA D AFP
Sbjct: 72 MPALIGGFGNYMLPLMIGATDTAFP 96
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 69.3 bits (162), Expect = 8e-11
Identities = 33/55 (60%), Positives = 39/55 (70%)
Frame = +1
Query: 508 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 672
+PLFV +V +TAF A AIT+LLTDRN T+F+D AGGGDP LYQHLF
Sbjct: 224 MPLFVWSVLVTAFLLLLALPVLAAAITMLLTDRNFGTTFYDAAGGGDPELYQHLF 278
Score = 50.0 bits (114), Expect = 5e-05
Identities = 31/67 (46%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIVE----NGAGTG*TVYPPLSSNIAHRGRSVDLAIFSL 418
PR+NNI F V NGAGTG TVY PLS++ G +VD+AI SL
Sbjct: 135 PRMNNISFWLLIPAFALLLGSTFVPGGTGNGAGTGWTVYAPLSTS-GSAGPAVDMAILSL 193
Query: 419 HLAGISS 439
H+AG SS
Sbjct: 194 HIAGASS 200
Score = 38.3 bits (85), Expect = 0.17
Identities = 31/100 (31%), Positives = 38/100 (38%), Gaps = 16/100 (16%)
Frame = +3
Query: 3 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-------SLIGD------DQIY---N 134
HKDIGTLY AEL PG + D DQ Y N
Sbjct: 36 HKDIGTLYLIFAIIAGIIGGAISGLMRAELAEPGIQYLQTWARFSDGPSATLDQAYHLWN 95
Query: 135 TIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFP 254
++TAH N VP+++GAPD+AFP
Sbjct: 96 VLITAHGLIMVFFMVMPAMIGGFGNWFVPIMIGAPDMAFP 135
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 68.9 bits (161), Expect = 1e-10
Identities = 34/53 (64%), Positives = 37/53 (69%)
Frame = +1
Query: 514 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 672
LF AV ITA AG IT++LTDRN NTSFF+ AGGGDPILYQHLF
Sbjct: 184 LFAWAVVITAVLLLLSLPVLAGGITMVLTDRNFNTSFFEVAGGGDPILYQHLF 236
Score = 66.5 bits (155), Expect = 6e-10
Identities = 33/63 (52%), Positives = 39/63 (61%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 430
PR+NNI + +ENG GTG T+YPPLS +H G SVDLAIF LHL+G
Sbjct: 96 PRLNNISYLLLIPSIVLFLFAGGIENGVGTGWTLYPPLSGIQSHSGPSVDLAIFGLHLSG 155
Query: 431 ISS 439
ISS
Sbjct: 156 ISS 158
Score = 50.8 bits (116), Expect = 3e-05
Identities = 30/84 (35%), Positives = 36/84 (42%), Gaps = 1/84 (1%)
Frame = +3
Query: 6 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXX 182
KDIG LY EL PG I D+Q+YN+I+TAHA
Sbjct: 13 KDIGVLYLIYALFAGLIGTAFSVLIRLELSGPGVQYIADNQLYNSIITAHAIIMIFFMVM 72
Query: 183 XXXXXXXXN*LVPLILGAPDIAFP 254
N L+PL LG PD+ FP
Sbjct: 73 PALIGGFGNFLLPLGLGGPDMGFP 96
>UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1;
Watasenia scintillans|Rep: Cytochrome c oxidase subunit
I - Watasenia scintillans (Sparkling enope)
Length = 217
Score = 68.5 bits (160), Expect = 1e-10
Identities = 56/181 (30%), Positives = 73/181 (40%), Gaps = 1/181 (0%)
Frame = +3
Query: 87 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPE*II 266
ELG PGSL+ DDQ+YN +VTAH N LVPL+LGAPD+AFP
Sbjct: 24 ELGQPGSLLNDDQLYNVVVTAHGFIMIFFMVMPIMIGGFGNWLVPLMLGAPDMAFPRMNN 83
Query: 267 *DFDSYPPPLYY*FQEEL*KMVQEQDEQFTPHFHLISHIEEDP*ILLFFHYI*QVFXXXX 446
F +P +Y + K +DE TP + + + +F ++ V
Sbjct: 84 MSFGFFPLHWHY-YSFFTVKGGLARDELSTPLYLVTISAGPSVDLAIFPLHLAGVSSILG 142
Query: 447 XXXXXXXXXXXXXXXXXXXXNTLICMSCRDYSXXXXXXTTCFSWSYYNIINRS-KLKYII 623
T IC+ Y TC S SYY IIN L YII
Sbjct: 143 SYWLYYNNSLYTVSSSSNGTTTFICLISVYYRYPSTPFFTCTSSSYYYIINSPLLLHYII 202
Query: 624 F 626
+
Sbjct: 203 W 203
Score = 33.1 bits (72), Expect = 6.3
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 386 GRSVDLAIFSLHLAGISS 439
G SVDLAIF LHLAG+SS
Sbjct: 122 GPSVDLAIFPLHLAGVSS 139
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 66.9 bits (156), Expect = 4e-10
Identities = 39/84 (46%), Positives = 44/84 (52%)
Frame = +3
Query: 3 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXX 182
HKD GTL AELG PG+L+GDDQ N IVTAHA
Sbjct: 13 HKDXGTLXXIFGAWAGMIGTALSLLIRAELGQPGTLLGDDQXXNVIVTAHAFVMIFXMXM 72
Query: 183 XXXXXXXXN*LVPLILGAPDIAFP 254
N LVPL++GAPD+AFP
Sbjct: 73 PIMIGGFGNWLVPLMIGAPDMAFP 96
Score = 36.7 bits (81), Expect = 0.51
Identities = 18/39 (46%), Positives = 21/39 (53%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS 367
PR+NN+ F VE GAGTG TVYPPL+
Sbjct: 96 PRMNNMSFWLLPPSFLLLLASSTVEAGAGTGWTVYPPLA 134
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 65.3 bits (152), Expect = 1e-09
Identities = 34/55 (61%), Positives = 38/55 (69%)
Frame = +1
Query: 508 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 672
+ LF AV ITA A AIT+LLTDRNLNTSF++ AGGGD ILYQHLF
Sbjct: 208 LALFGWAVVITAVLLLLSLPVLAAAITMLLTDRNLNTSFYELAGGGDAILYQHLF 262
Score = 64.1 bits (149), Expect = 3e-09
Identities = 30/63 (47%), Positives = 37/63 (58%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 430
PR+NN+ + I+ENG GTG T+YPPLS +H VDL IF LHL+G
Sbjct: 122 PRLNNVSYWLLIPSLFLFVFAAIIENGVGTGWTLYPPLSGIQSHSSMGVDLGIFGLHLSG 181
Query: 431 ISS 439
ISS
Sbjct: 182 ISS 184
Score = 46.8 bits (106), Expect = 5e-04
Identities = 26/84 (30%), Positives = 36/84 (42%), Gaps = 1/84 (1%)
Frame = +3
Query: 6 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXX 182
KDI LY EL PG I D+Q+YN+I+T+H
Sbjct: 39 KDIAILYLIFALFSGLLGTAFSVLIRLELSGPGIQYIEDNQLYNSIITSHGVIMIFFMVM 98
Query: 183 XXXXXXXXN*LVPLILGAPDIAFP 254
N L+P+++G PD+AFP
Sbjct: 99 PALIGGFGNFLLPILIGGPDMAFP 122
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 63.7 bits (148), Expect = 4e-09
Identities = 28/63 (44%), Positives = 41/63 (65%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 430
PRINN+ F +++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G
Sbjct: 113 PRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSG 172
Query: 431 ISS 439
+SS
Sbjct: 173 LSS 175
Score = 62.1 bits (144), Expect = 1e-08
Identities = 29/55 (52%), Positives = 37/55 (67%)
Frame = +1
Query: 508 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 672
+PLFV +V ITA A +T+LL DRN NTSFF +GGGDP+LY+H+F
Sbjct: 199 LPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIF 253
Score = 37.5 bits (83), Expect = 0.29
Identities = 19/53 (35%), Positives = 27/53 (50%)
Frame = +3
Query: 96 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFP 254
NP L+ + Q++N ++TAHA N LVPL +G+ D AFP
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFP 113
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 63.7 bits (148), Expect = 4e-09
Identities = 28/63 (44%), Positives = 41/63 (65%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 430
PRINN+ F +++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G
Sbjct: 113 PRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSG 172
Query: 431 ISS 439
+SS
Sbjct: 173 LSS 175
Score = 62.1 bits (144), Expect = 1e-08
Identities = 29/55 (52%), Positives = 37/55 (67%)
Frame = +1
Query: 508 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 672
+PLFV +V ITA A +T+LL DRN NTSFF +GGGDP+LY+H+F
Sbjct: 199 LPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIF 253
Score = 37.5 bits (83), Expect = 0.29
Identities = 19/53 (35%), Positives = 27/53 (50%)
Frame = +3
Query: 96 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFP 254
NP L+ + Q++N ++TAHA N LVPL +G+ D AFP
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFP 113
>UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep:
Cox-i3 protein - Candida stellata (Yeast)
Length = 588
Score = 63.7 bits (148), Expect = 4e-09
Identities = 28/63 (44%), Positives = 41/63 (65%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 430
PRINN+ F +++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G
Sbjct: 113 PRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSG 172
Query: 431 ISS 439
+SS
Sbjct: 173 LSS 175
Score = 62.1 bits (144), Expect = 1e-08
Identities = 29/55 (52%), Positives = 37/55 (67%)
Frame = +1
Query: 508 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 672
+PLFV +V ITA A +T+LL DRN NTSFF +GGGDP+LY+H+F
Sbjct: 199 LPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIF 253
Score = 37.5 bits (83), Expect = 0.29
Identities = 19/53 (35%), Positives = 27/53 (50%)
Frame = +3
Query: 96 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFP 254
NP L+ + Q++N ++TAHA N LVPL +G+ D AFP
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFP 113
>UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep:
Cox-i2 protein - Candida stellata (Yeast)
Length = 586
Score = 63.7 bits (148), Expect = 4e-09
Identities = 28/63 (44%), Positives = 41/63 (65%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 430
PRINN+ F +++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G
Sbjct: 113 PRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSG 172
Query: 431 ISS 439
+SS
Sbjct: 173 LSS 175
Score = 62.1 bits (144), Expect = 1e-08
Identities = 29/55 (52%), Positives = 37/55 (67%)
Frame = +1
Query: 508 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 672
+PLFV +V ITA A +T+LL DRN NTSFF +GGGDP+LY+H+F
Sbjct: 199 LPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIF 253
Score = 37.5 bits (83), Expect = 0.29
Identities = 19/53 (35%), Positives = 27/53 (50%)
Frame = +3
Query: 96 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFP 254
NP L+ + Q++N ++TAHA N LVPL +G+ D AFP
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFP 113
>UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Aedes
cretinus|Rep: Cytochrome c oxidase subunit I - Aedes
cretinus
Length = 153
Score = 62.9 bits (146), Expect = 7e-09
Identities = 31/55 (56%), Positives = 35/55 (63%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFS 415
PR+NN+ F +VENGAGTG TVYPPLSS AH G SVDLAI+S
Sbjct: 11 PRMNNMSFWMLPPSLTLLLSSSMVENGAGTGWTVYPPLSSGTAHAGASVDLAIYS 65
Score = 51.2 bits (117), Expect = 2e-05
Identities = 26/54 (48%), Positives = 29/54 (53%)
Frame = +3
Query: 510 TLICMSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFI 671
T ICM C +Y TCFS S+Y IIN K KY IF W P +STFI
Sbjct: 94 TFICMICCNYCYFITSFFTCFSSSHYYIINWPKSKYFIFWPNWSSSPYSLSTFI 147
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 61.7 bits (143), Expect = 2e-08
Identities = 33/67 (49%), Positives = 40/67 (59%), Gaps = 4/67 (5%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV----YPPLSSNIAHRGRSVDLAIFSL 418
PR+NNI F I+E G GTG T+ YPPLS +H G SVDLAIF+L
Sbjct: 124 PRLNNISFWLLPPSLLLLVFSAIIEGGVGTGWTLLKDKYPPLSGLQSHSGPSVDLAIFAL 183
Query: 419 HLAGISS 439
HL+G+SS
Sbjct: 184 HLSGVSS 190
Score = 57.6 bits (133), Expect = 3e-07
Identities = 24/30 (80%), Positives = 28/30 (93%)
Frame = +1
Query: 583 ITILLTDRNLNTSFFDPAGGGDPILYQHLF 672
IT++LTDRN NTSFF+ AGGGDPIL+QHLF
Sbjct: 232 ITMVLTDRNFNTSFFEVAGGGDPILFQHLF 261
Score = 54.8 bits (126), Expect = 2e-06
Identities = 34/98 (34%), Positives = 43/98 (43%), Gaps = 1/98 (1%)
Frame = +3
Query: 6 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXX 182
KDIGTLY EL PG I ++Q+YN+I+TAHA
Sbjct: 41 KDIGTLYLIFALFSGLLGTAFSVLIRLELSGPGVQFIANNQLYNSIITAHAILMIFFMVM 100
Query: 183 XXXXXXXXN*LVPLILGAPDIAFPE*II*DFDSYPPPL 296
N L+PL++G PD+AFP F PP L
Sbjct: 101 PALIGGFGNFLMPLMIGGPDMAFPRLNNISFWLLPPSL 138
>UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa
group|Rep: COX1-i5 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 608
Score = 60.5 bits (140), Expect = 4e-08
Identities = 32/62 (51%), Positives = 38/62 (61%)
Frame = +2
Query: 254 RINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGI 433
R+NNI F +VE GAGTG TVY PL+ +H G +VDLAIFSLHL+G
Sbjct: 102 RLNNISFWLLVPSLILILTSALVEAGAGTGWTVYFPLAGIQSHSGPAVDLAIFSLHLSGF 161
Query: 434 SS 439
SS
Sbjct: 162 SS 163
Score = 58.8 bits (136), Expect = 1e-07
Identities = 28/56 (50%), Positives = 35/56 (62%)
Frame = +1
Query: 505 SIPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 672
++PLF AV TA A +T+ + DRN NTSFF+ AGGGD +LYQHLF
Sbjct: 186 NVPLFAWAVLFTAILLLLSLPVLAAGLTMGIFDRNFNTSFFEYAGGGDAVLYQHLF 241
Score = 42.7 bits (96), Expect = 0.008
Identities = 28/84 (33%), Positives = 35/84 (41%), Gaps = 2/84 (2%)
Frame = +3
Query: 6 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXX 179
KDI LY EL N GS L G+ Q +N ++TAHA
Sbjct: 17 KDIAVLYFIFALFSAMIGTGLSAIIRLELANTGSPFLHGNTQAFNVVITAHAILMIFFFV 76
Query: 180 XXXXXXXXXN*LVPLILGAPDIAF 251
N L+PL+LGA D+AF
Sbjct: 77 MPALVGGFGNYLMPLMLGASDMAF 100
>UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1;
Myrmarachne sp. G FSC-2006|Rep: Cytochrome c oxidase
subunit I - Myrmarachne sp. G FSC-2006
Length = 129
Score = 59.3 bits (137), Expect = 8e-08
Identities = 28/41 (68%), Positives = 31/41 (75%)
Frame = +2
Query: 317 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 439
+VE G G G TVYPPL+S + H G SVD AIFSLHLAG SS
Sbjct: 12 MVEMGVGAGWTVYPPLASVVGHGGSSVDFAIFSLHLAGASS 52
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 58.8 bits (136), Expect = 1e-07
Identities = 27/53 (50%), Positives = 34/53 (64%)
Frame = +1
Query: 514 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 672
LF+ A ITA AG +T++L DRN NTSF+D GGGD IL+QH+F
Sbjct: 186 LFIWAALITAILLIITLPVLAGGVTLILCDRNFNTSFYDVVGGGDLILFQHIF 238
Score = 44.0 bits (99), Expect = 0.003
Identities = 22/63 (34%), Positives = 30/63 (47%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 430
PR+NN+ F + E G G G T+YP L H + D +F++HL G
Sbjct: 98 PRLNNMSFWMYLAGFGCVVNGFLTEEGMGVGWTLYPTLICIDFHSSLACDFVMFAVHLLG 157
Query: 431 ISS 439
ISS
Sbjct: 158 ISS 160
Score = 36.7 bits (81), Expect = 0.51
Identities = 16/51 (31%), Positives = 23/51 (45%)
Frame = +3
Query: 102 GSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFP 254
G L GD Q YN ++T+H N +P++ G PD+ FP
Sbjct: 48 GILFGDYQFYNVLITSHGLIMVFAFIMPVMMGGLVNYFIPVMAGFPDMVFP 98
>UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia
polymorpha|Rep: CoxI intron4 ORF - Marchantia polymorpha
(Liverwort)
Length = 434
Score = 56.8 bits (131), Expect = 4e-07
Identities = 34/100 (34%), Positives = 44/100 (44%), Gaps = 2/100 (2%)
Frame = +3
Query: 3 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYNTIVTAHAXXXXXXX 176
HKDIGTLY EL PG+ I G+ Q+YN ++TAHA
Sbjct: 14 HKDIGTLYLIFGAIAGVMGTCFSVLIRMELAQPGNQILGGNHQLYNVLITAHAFLMIFFM 73
Query: 177 XXXXXXXXXXN*LVPLILGAPDIAFPE*II*DFDSYPPPL 296
N VP+++G+PD+AFP F PP L
Sbjct: 74 VMPAMIGGFGNWFVPILIGSPDMAFPRLNNISFWLLPPSL 113
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 56.4 bits (130), Expect = 6e-07
Identities = 23/33 (69%), Positives = 28/33 (84%)
Frame = +1
Query: 574 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 672
A IT+LL DRN T+FF+P+GGGDPIL+QHLF
Sbjct: 293 ASGITMLLFDRNFGTAFFEPSGGGDPILFQHLF 325
Score = 39.1 bits (87), Expect = 0.096
Identities = 21/37 (56%), Positives = 24/37 (64%)
Frame = +2
Query: 329 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 439
G G G T+YPPLS G VD +FSLHLAG+SS
Sbjct: 217 GCGIGWTLYPPLSI-WEGSGFGVDYLMFSLHLAGVSS 252
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 56.0 bits (129), Expect = 8e-07
Identities = 26/55 (47%), Positives = 34/55 (61%)
Frame = +1
Query: 508 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 672
I +FV +T+F AG++ LL DRN NTSF+D GG+P+LYQHLF
Sbjct: 191 ISMFVWTSYLTSFLLVLSVPVLAGSLLFLLLDRNFNTSFYDTKKGGNPLLYQHLF 245
Score = 46.8 bits (106), Expect = 5e-04
Identities = 26/86 (30%), Positives = 36/86 (41%), Gaps = 2/86 (2%)
Frame = +3
Query: 3 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXX 176
HK IGT Y EL +PG G Q+YN+++T H
Sbjct: 21 HKTIGTYYIVLGYWAGLGGSVLSMLIRFELSSPGGHLFFGSGQVYNSVLTMHGVLMIFFL 80
Query: 177 XXXXXXXXXXN*LVPLILGAPDIAFP 254
N ++PL+LGAP++AFP
Sbjct: 81 VMPILIGGFGNWMLPLMLGAPEMAFP 106
Score = 33.5 bits (73), Expect = 4.8
Identities = 20/63 (31%), Positives = 25/63 (39%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 430
PR+N + F + G G+ T YPPLS S+D I LH G
Sbjct: 106 PRVNALSFWFTFVALLMVYQSFFIGGGPGSSWTFYPPLSVE-GQPELSLDTMILGLHTVG 164
Query: 431 ISS 439
I S
Sbjct: 165 IGS 167
>UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI2
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI2 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI2 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI2 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 533
Score = 56.0 bits (129), Expect = 8e-07
Identities = 37/99 (37%), Positives = 43/99 (43%), Gaps = 2/99 (2%)
Frame = +3
Query: 6 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXX 179
KDIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 11 KDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMV 70
Query: 180 XXXXXXXXXN*LVPLILGAPDIAFPE*II*DFDSYPPPL 296
N LVP+++GAPD+AFP F PP L
Sbjct: 71 MPAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSL 109
>UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1;
Aplidium nordmanni|Rep: Cytochrome c oxidase subunit I -
Aplidium nordmanni
Length = 227
Score = 52.8 bits (121), Expect = 7e-06
Identities = 29/63 (46%), Positives = 34/63 (53%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 430
PR+ N+ F + G G VYPP SS +AH +VDL IF LHLAG
Sbjct: 85 PRLXNMSFWLLPPSLXXLCLSVFIGXGVGXXWXVYPPXSSGLAHSSGAVDLGIFXLHLAG 144
Query: 431 ISS 439
ISS
Sbjct: 145 ISS 147
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 51.6 bits (118), Expect = 2e-05
Identities = 25/63 (39%), Positives = 35/63 (55%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 430
PR+NN+ + G G G T+YPPLS++ G +DLA+FSLH+AG
Sbjct: 97 PRLNNLSVWLALGSLFLMCMAFLSSGGLGCGWTMYPPLSNSEFMDGLPIDLAVFSLHMAG 156
Query: 431 ISS 439
+SS
Sbjct: 157 MSS 159
Score = 51.6 bits (118), Expect = 2e-05
Identities = 21/33 (63%), Positives = 27/33 (81%)
Frame = +1
Query: 574 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 672
A +T+LL DR+ +TSF+ P GGGDPIL+QHLF
Sbjct: 206 AAGLTLLLLDRHFSTSFYYPEGGGDPILWQHLF 238
Score = 37.9 bits (84), Expect = 0.22
Identities = 21/84 (25%), Positives = 33/84 (39%)
Frame = +3
Query: 3 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXX 182
HKDIGT+Y EL +PG + +Y++I+T HA
Sbjct: 14 HKDIGTIYLYMGLWSGVFGLSLSHCMRIELSHPGEWLQVGYMYHSIMTMHAFMMIFFFVM 73
Query: 183 XXXXXXXXN*LVPLILGAPDIAFP 254
N +PL++ D++ P
Sbjct: 74 PTSIGGLGNWFIPLMIKIKDLSMP 97
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 51.2 bits (117), Expect = 2e-05
Identities = 23/56 (41%), Positives = 34/56 (60%)
Frame = +1
Query: 505 SIPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 672
S+ LF ++ + + A IT++LTD++L T F+D GGDP+LYQHLF
Sbjct: 164 SLSLFCWSIVLVSLLLVLSLPVLAVGITLILTDKHLGTCFYDATMGGDPLLYQHLF 219
Score = 36.7 bits (81), Expect = 0.51
Identities = 20/36 (55%), Positives = 24/36 (66%)
Frame = +2
Query: 332 AGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 439
A G T YPPLSS SV+ ++FSLHLAGI+S
Sbjct: 112 ASAGWTFYPPLSS----LSPSVEFSVFSLHLAGIAS 143
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 51.2 bits (117), Expect = 2e-05
Identities = 25/56 (44%), Positives = 33/56 (58%)
Frame = +1
Query: 505 SIPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 672
S+PLF A+ T+ A A+ +L D TSFF+P GGGDP++YQHLF
Sbjct: 191 SMPLFCWAMLATSSLILLSTPVLASALILLSFDLIAGTSFFNPVGGGDPVVYQHLF 246
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 50.0 bits (114), Expect = 5e-05
Identities = 19/33 (57%), Positives = 28/33 (84%)
Frame = +1
Query: 574 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 672
AGA+T+L D+ L T+FF+PA GGDP++YQ++F
Sbjct: 159 AGAVTMLFLDKYLGTNFFNPAKGGDPLIYQNIF 191
Score = 35.9 bits (79), Expect = 0.89
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = +3
Query: 99 PGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFP 254
PG + D + YN ++T H N L+PL++GA D+AFP
Sbjct: 2 PGMQVVDFKTYNYLLTGHGVGMLFWWAIAAHIGGFGNFLLPLMIGAKDVAFP 53
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 49.2 bits (112), Expect = 9e-05
Identities = 25/55 (45%), Positives = 34/55 (61%)
Frame = +1
Query: 508 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 672
IPLFV ++ +T+F A T L+ DR + T FF+PA GGD +L+QHLF
Sbjct: 197 IPLFVWSMLVTSFLVILAMPAIMIASTSLILDRLVGTHFFNPAEGGDVLLWQHLF 251
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 48.8 bits (111), Expect = 1e-04
Identities = 20/32 (62%), Positives = 24/32 (75%)
Frame = +1
Query: 577 GAITILLTDRNLNTSFFDPAGGGDPILYQHLF 672
G + +LL+D + NT FFDP GDPILYQHLF
Sbjct: 210 GGVLMLLSDLHFNTLFFDPTFAGDPILYQHLF 241
Score = 41.1 bits (92), Expect = 0.024
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR-SVDLAIFSLHLA 427
PRIN+I E G GTG T+YPPLS+++ +VD+ IF L ++
Sbjct: 100 PRINSISLLLQPIAFVLVILSTAAEFGGGTGWTLYPPLSTSLMSLSPVAVDVIIFGLLVS 159
Query: 428 GISS 439
G++S
Sbjct: 160 GVAS 163
>UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1;
Munidopsis verrucosus|Rep: Cytochrome c oxidase subunit
1 - Munidopsis verrucosus
Length = 154
Score = 47.6 bits (108), Expect = 3e-04
Identities = 21/27 (77%), Positives = 25/27 (92%)
Frame = +2
Query: 359 PLSSNIAHRGRSVDLAIFSLHLAGISS 439
PL+S+IAH G SVD+AIFSLHLAG+SS
Sbjct: 72 PLASSIAHAGASVDMAIFSLHLAGVSS 98
Score = 32.7 bits (71), Expect = 8.3
Identities = 17/33 (51%), Positives = 20/33 (60%)
Frame = +1
Query: 508 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDR 606
+PLF+ AV IT AGAIT+LLTDR
Sbjct: 122 VPLFIWAVFITTVLLLLSLPVLAGAITMLLTDR 154
>UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1;
Celatoblatta vulgaris|Rep: Cytochrome oxidase subunit I
- Celatoblatta vulgaris
Length = 134
Score = 47.2 bits (107), Expect = 4e-04
Identities = 20/35 (57%), Positives = 23/35 (65%)
Frame = +3
Query: 522 MSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF 626
M C +YS +TC WSYYN IN SKLKYI+F
Sbjct: 84 MICSNYSFTIIIVSTCSCWSYYNTINWSKLKYILF 118
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 45.2 bits (102), Expect = 0.001
Identities = 18/32 (56%), Positives = 22/32 (68%)
Frame = +1
Query: 577 GAITILLTDRNLNTSFFDPAGGGDPILYQHLF 672
G +LL D + TSFF P GGGDP+L+QH F
Sbjct: 230 GGAVMLLFDLSFGTSFFRPEGGGDPVLFQHFF 261
Score = 32.7 bits (71), Expect = 8.3
Identities = 18/57 (31%), Positives = 27/57 (47%)
Frame = +3
Query: 87 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPE 257
EL P + + D +YN + T H N L+P ++GAPD+AFP+
Sbjct: 64 ELITPPADLVDPSVYNGLYTMHGTVMLFLFLFPILNGFN-NLLIPTMIGAPDMAFPK 119
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 44.4 bits (100), Expect = 0.003
Identities = 25/84 (29%), Positives = 36/84 (42%)
Frame = +3
Query: 3 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXX 182
HKDIG LY EL +PG + + YN+++T+H
Sbjct: 94 HKDIGLLYGAFGLTAFAVGGLMVVLMRIELADPGMTVISNTFYNSLLTSHGITMLFLFAT 153
Query: 183 XXXXXXXXN*LVPLILGAPDIAFP 254
N L+PL++GA D+AFP
Sbjct: 154 PIIAAFS-NYLIPLLIGADDMAFP 176
Score = 37.9 bits (84), Expect = 0.22
Identities = 20/31 (64%), Positives = 22/31 (70%)
Frame = +1
Query: 580 AITILLTDRNLNTSFFDPAGGGDPILYQHLF 672
AI +LL DRN TSFF AG G IL+QHLF
Sbjct: 292 AIMMLLFDRNFGTSFF--AGEGGAILWQHLF 320
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 43.6 bits (98), Expect = 0.004
Identities = 24/56 (42%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Frame = +1
Query: 508 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNL-NTSFFDPAGGGDPILYQHLF 672
+PLFV A+ T+ G + +L+T NL FDPA GGDP+L+QHLF
Sbjct: 207 MPLFVWAIYATS-CIQVLATPVIGLLLVLVTVENLFGFGMFDPARGGDPVLFQHLF 261
Score = 39.1 bits (87), Expect = 0.096
Identities = 24/84 (28%), Positives = 30/84 (35%)
Frame = +3
Query: 3 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXX 182
HK IG ++ EL PG I D YN T H
Sbjct: 42 HKRIGLMFLFWVLLFFLVGGIFALLIRVELLTPGPTIMDAMTYNRTFTLHGLVMIFLFMI 101
Query: 183 XXXXXXXXN*LVPLILGAPDIAFP 254
N ++PL+LGA D+AFP
Sbjct: 102 PAIPAVFGNFMLPLMLGAKDVAFP 125
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 43.6 bits (98), Expect = 0.004
Identities = 20/33 (60%), Positives = 24/33 (72%)
Frame = +1
Query: 574 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 672
A A+ +LLTDR + FF+PA GGDPI Y HLF
Sbjct: 205 AAALLMLLTDRLGVSGFFNPAVGGDPIAYAHLF 237
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 43.2 bits (97), Expect = 0.006
Identities = 21/55 (38%), Positives = 30/55 (54%)
Frame = +1
Query: 508 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 672
+PLFV + + A A+ +LL DR L ++FFDP GG +L+QH F
Sbjct: 200 VPLFVWMMLMQAILIILALPALNSALAMLLIDRWLGSAFFDPTRGGSAVLWQHYF 254
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 43.2 bits (97), Expect = 0.006
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = +1
Query: 526 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 672
++ +T+F ++ DR+ NT FF+ + GDP+LYQHLF
Sbjct: 193 SIVLTSFLLLLSLPVVTAVFLMVFLDRHYNTMFFESSNSGDPVLYQHLF 241
Score = 41.1 bits (92), Expect = 0.024
Identities = 23/63 (36%), Positives = 34/63 (53%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 430
PR+N +E G+GTG T+YPPLS+++++ G +D IF L AG
Sbjct: 103 PRVNLYSLLFQPIGFVLVVSSIYLEIGSGTGWTLYPPLSTSLSNVG--IDFIIFGLLAAG 160
Query: 431 ISS 439
I+S
Sbjct: 161 IAS 163
>UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia
lipolytica|Rep: COX1-i3 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 457
Score = 42.7 bits (96), Expect = 0.008
Identities = 28/84 (33%), Positives = 35/84 (41%), Gaps = 2/84 (2%)
Frame = +3
Query: 6 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXX 179
KDI LY EL N GS L G+ Q +N ++TAHA
Sbjct: 17 KDIAVLYFIFALFSAMIGTGLSAIIRLELANTGSPFLHGNTQAFNVVITAHAILMIFFFV 76
Query: 180 XXXXXXXXXN*LVPLILGAPDIAF 251
N L+PL+LGA D+AF
Sbjct: 77 MPALVGGFGNYLMPLMLGASDMAF 100
>UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7;
Echinoida|Rep: Cytochrome c oxidase subunit I -
Echinometra oblonga
Length = 386
Score = 42.3 bits (95), Expect = 0.010
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = +1
Query: 607 NLNTSFFDPAGGGDPILYQHLF 672
N T+FFDPAGGGD IL+QHLF
Sbjct: 191 NYYTTFFDPAGGGDXILFQHLF 212
>UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1;
Tetragona dorsalis ziegleri|Rep: Cytochrome c oxidase
subunit I - Tetragona dorsalis ziegleri
Length = 111
Score = 41.9 bits (94), Expect = 0.014
Identities = 23/54 (42%), Positives = 30/54 (55%)
Frame = +1
Query: 508 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHL 669
I LF ++ IT AG IT+LL+DRN N FF GG PIL+Q++
Sbjct: 14 INLFSWSISITVNLSILSLPMLAGTITMLLSDRNFNKFFFILIGGEYPILHQYM 67
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 41.1 bits (92), Expect = 0.024
Identities = 23/60 (38%), Positives = 30/60 (50%), Gaps = 5/60 (8%)
Frame = +1
Query: 508 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPA-----GGGDPILYQHLF 672
+PL + + +TA A +LL DR+ T FF GGGDPIL+QHLF
Sbjct: 214 LPLTIWGLWLTAILNALFVPVLGSAALLLLLDRSFGTEFFVAGASAVRGGGDPILWQHLF 273
Score = 32.7 bits (71), Expect = 8.3
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +2
Query: 332 AGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 439
AG G T Y PLS+N+ G L + ++ + G+SS
Sbjct: 155 AGAGWTTYTPLSTNVGMPGMGQTLVVAAIFVTGVSS 190
>UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30;
Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia
cenocepacia MC0-3
Length = 1004
Score = 41.1 bits (92), Expect = 0.024
Identities = 18/31 (58%), Positives = 21/31 (67%)
Frame = +1
Query: 580 AITILLTDRNLNTSFFDPAGGGDPILYQHLF 672
A +L DRN T FFD A GG P+L+QHLF
Sbjct: 241 AFLLLWLDRNAGTHFFDVAHGGRPLLWQHLF 271
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 41.1 bits (92), Expect = 0.024
Identities = 19/31 (61%), Positives = 24/31 (77%)
Frame = +1
Query: 580 AITILLTDRNLNTSFFDPAGGGDPILYQHLF 672
AIT LL DRN+N++ +D G DP+LYQHLF
Sbjct: 217 AITGLLLDRNINSTIYDVIG--DPVLYQHLF 245
Score = 35.1 bits (77), Expect = 1.6
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Frame = +2
Query: 251 PRINNIRFXXXXXXXXXXXXXXIV-ENGAGTG*TVYPPLSSNIAHR-GRSVDLAIFSLHL 424
PR+N I F ++ +G T+YPPLS+ A G ++DL++ +H+
Sbjct: 105 PRMNGISFWMLIVGVVIFVISNVLMSKPISSGWTLYPPLSTRDADNIGVNIDLSLLVVHV 164
Query: 425 AGISS 439
GISS
Sbjct: 165 LGISS 169
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 41.1 bits (92), Expect = 0.024
Identities = 19/31 (61%), Positives = 23/31 (74%)
Frame = +1
Query: 580 AITILLTDRNLNTSFFDPAGGGDPILYQHLF 672
A+ +LL DRN T+FF A GGDPI +QHLF
Sbjct: 260 ALIMLLLDRNFGTTFFTVA-GGDPIFWQHLF 289
Score = 33.5 bits (73), Expect = 4.8
Identities = 21/84 (25%), Positives = 30/84 (35%)
Frame = +3
Query: 3 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXX 182
HKDIG LY EL + +YN ++T+H
Sbjct: 68 HKDIGILYGVYGTIAFAWGGVSVLLMRTELATSSETLISPSLYNGLLTSHGITMLFLFGT 127
Query: 183 XXXXXXXXN*LVPLILGAPDIAFP 254
N +PL++ A D+AFP
Sbjct: 128 PMIAAFG-NYFIPLLIDADDMAFP 150
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 40.7 bits (91), Expect = 0.031
Identities = 23/55 (41%), Positives = 28/55 (50%)
Frame = +1
Query: 508 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 672
+PLFV + AF A LL DR+ T FF P GGD +L+QHLF
Sbjct: 199 MPLFVWMQLVVAFILIFAFPVLTVATIQLLFDRHFGTRFFLPNLGGDAVLWQHLF 253
Score = 33.1 bits (72), Expect = 6.3
Identities = 22/84 (26%), Positives = 31/84 (36%)
Frame = +3
Query: 3 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXX 182
HK IG +Y +LG P + +YN + T H
Sbjct: 31 HKRIGIMYLVSAFVFFLIGGIEALLMRIQLGVPDNTFLTPDVYNQMFTMHGTTMIFLGLM 90
Query: 183 XXXXXXXXN*LVPLILGAPDIAFP 254
N +VPL++GA D+AFP
Sbjct: 91 PLNVGLG-NYMVPLMIGARDMAFP 113
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 39.9 bits (89), Expect = 0.055
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = +1
Query: 508 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 672
+PLFV ++ T+ ++ ++ + FDPA GGDP+L+QH F
Sbjct: 200 LPLFVWSIYATSVIQILATPVLGMSLLLVAVEHAFGWGIFDPARGGDPVLFQHFF 254
Score = 39.5 bits (88), Expect = 0.072
Identities = 23/85 (27%), Positives = 32/85 (37%)
Frame = +3
Query: 3 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXX 182
HK IG ++ EL PG I D YN + T H
Sbjct: 35 HKRIGVMFLVATTISFALGGFFALLIRLELLTPGPTIMDAMTYNRMFTLHGVVMIFLFMI 94
Query: 183 XXXXXXXXN*LVPLILGAPDIAFPE 257
N L+P+++GA D+AFP+
Sbjct: 95 PAIPSGFGNFLLPIMIGAKDVAFPK 119
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 39.5 bits (88), Expect = 0.072
Identities = 16/31 (51%), Positives = 22/31 (70%)
Frame = +1
Query: 580 AITILLTDRNLNTSFFDPAGGGDPILYQHLF 672
A+T+L D+ + T FFD A GGD + YQ+LF
Sbjct: 205 AVTMLTFDKYIGTHFFDAAAGGDALTYQNLF 235
Score = 37.5 bits (83), Expect = 0.29
Identities = 24/85 (28%), Positives = 31/85 (36%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDD-QIYNTIVTAHAXXXXXXXX 179
HK +G LY EL G I DD +YNT + H
Sbjct: 14 HKRVGILYLIGSIAAFAVAGIMAMLIRLELSQIGPTITDDPSVYNTWLYFHGAAMILAFQ 73
Query: 180 XXXXXXXXXN*LVPLILGAPDIAFP 254
N +PL++GA D+AFP
Sbjct: 74 IPALTGFFANYFIPLMIGAKDVAFP 98
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 39.5 bits (88), Expect = 0.072
Identities = 17/31 (54%), Positives = 23/31 (74%)
Frame = +1
Query: 580 AITILLTDRNLNTSFFDPAGGGDPILYQHLF 672
A+ ++ DR+ T+FF+ A GGDPIL QHLF
Sbjct: 366 AVIMMAFDRHWQTTFFEYAYGGDPILSQHLF 396
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 39.1 bits (87), Expect = 0.096
Identities = 17/55 (30%), Positives = 30/55 (54%)
Frame = +1
Query: 508 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 672
+P++V +V + A ++L +R + S+F+PA GGDP+L+Q F
Sbjct: 191 MPIYVWSVFAASVLNLFSLAGLTAATLLVLLERKIGLSWFNPAVGGDPVLFQQFF 245
Score = 34.7 bits (76), Expect = 2.1
Identities = 22/84 (26%), Positives = 30/84 (35%)
Frame = +3
Query: 3 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXX 182
HK IG +Y +L P + + YN I+T H
Sbjct: 24 HKKIGLMYTATAFFAFALAGVFSLLIRTQLAVPNNQFLTGEQYNQILTLHGATMLFFFII 83
Query: 183 XXXXXXXXN*LVPLILGAPDIAFP 254
N +VPL+LGA D+A P
Sbjct: 84 QAGLTGFGNFVVPLMLGARDVALP 107
>UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3;
Rhodobacteraceae|Rep: Cytochrome c, monohaem -
Rhodobacter sphaeroides ATCC 17025
Length = 878
Score = 37.5 bits (83), Expect = 0.29
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = +1
Query: 601 DRNLNTSFFDPAGGGDPILYQHLF 672
+R + FFDP GGDP+L+QHLF
Sbjct: 254 ERGFDWPFFDPERGGDPLLWQHLF 277
>UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacillus
flagellatus KT|Rep: Cytochrome-c oxidase -
Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875)
Length = 631
Score = 37.1 bits (82), Expect = 0.39
Identities = 22/55 (40%), Positives = 28/55 (50%)
Frame = +1
Query: 508 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 672
+P+FV AV + +F A +L DR FF A GDPIL+QHLF
Sbjct: 204 MPIFVWAVLVMSFMIVFALPPLVIASLMLALDRMAGMHFFT-AASGDPILWQHLF 257
>UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1;
Pachymerium ferrugineum|Rep: Cytochrome oxidase subunit
I - Pachymerium ferrugineum
Length = 219
Score = 36.7 bits (81), Expect = 0.51
Identities = 22/55 (40%), Positives = 26/55 (47%)
Frame = +1
Query: 256 NK*YKILTPTPLPYIINFKKNCRKWCRNRMNSLPPTFI*YRT*RKIRRSCYFFTT 420
NK +KIL TPL Y N C K C + +NSLP Y T R +F T
Sbjct: 81 NKQFKILIITPLTYTTNSIYGCSKRCSHSVNSLPAPCCKYLTLGPFRSYNHFCPT 135
>UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1;
Kluyveromyces thermotolerans|Rep: Putative DNA
endonuclease - Kluyveromyces thermotolerans (Yeast)
Length = 542
Score = 36.7 bits (81), Expect = 0.51
Identities = 28/99 (28%), Positives = 38/99 (38%), Gaps = 2/99 (2%)
Frame = +3
Query: 6 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXX 179
KDI LY EL PG+ L G+ Q++N +V HA
Sbjct: 12 KDIAILYFIFAIFCGMAGTAMSVIIRLELAAPGNQYLGGNHQLFNVLVVGHAVLMIFFLV 71
Query: 180 XXXXXXXXXN*LVPLILGAPDIAFPE*II*DFDSYPPPL 296
N L+PL++GA D++F F PP L
Sbjct: 72 MPALIGGFGNYLLPLMIGASDMSFARLNNISFWLLPPAL 110
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 36.3 bits (80), Expect = 0.67
Identities = 24/66 (36%), Positives = 32/66 (48%), Gaps = 11/66 (16%)
Frame = +1
Query: 508 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP-----------AGGGDPI 654
+PL + A+ ITA A ++L DR + T FF P AGGG P+
Sbjct: 219 LPLTIWAMFITALLQAFALPVLTAAGFMMLADRLIGTGFFLPEGLVVNNSPMAAGGGQPL 278
Query: 655 LYQHLF 672
L+QHLF
Sbjct: 279 LWQHLF 284
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 36.3 bits (80), Expect = 0.67
Identities = 20/38 (52%), Positives = 25/38 (65%), Gaps = 5/38 (13%)
Frame = +1
Query: 574 AGAITILLTDRNLNTSFF-----DPAGGGDPILYQHLF 672
AGAI +LL +R+L FF DPA GDP L+QH+F
Sbjct: 209 AGAIMLLL-ERHLGMHFFTPVPGDPAASGDPRLFQHIF 245
>UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17;
Bacteria|Rep: Cytochrome C oxidase subunit I -
Symbiobacterium thermophilum
Length = 628
Score = 35.5 bits (78), Expect = 1.2
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = +1
Query: 508 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 672
+P+FV +T+ A+ +L+ DR +FF+ GG + YQHLF
Sbjct: 201 MPVFVWTTLVTSAIIIFAFPSVTVALIMLMFDRTFAANFFEVLRGGSVVFYQHLF 255
>UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5;
Sulfolobaceae|Rep: Quinol oxidase subunit 1/3 -
Sulfolobus acidocaldarius
Length = 788
Score = 35.5 bits (78), Expect = 1.2
Identities = 19/55 (34%), Positives = 24/55 (43%)
Frame = +1
Query: 508 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 672
+PLFV TA + +R T FFD A GG P+L+Q LF
Sbjct: 179 MPLFVWGFFTTAILMIIAMPSLTAGLVFAYLERLWGTPFFDSALGGSPVLWQQLF 233
>UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobacter
shibae DFL 12|Rep: Cytochrome-c oxidase -
Dinoroseobacter shibae DFL 12
Length = 853
Score = 35.1 bits (77), Expect = 1.6
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +1
Query: 589 ILLTDRNLNTSFFDPAGGGDPILYQHLF 672
+L +R L FFD GGDP+L+QHLF
Sbjct: 250 LLEAERLLGLPFFDHTLGGDPLLWQHLF 277
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 35.1 bits (77), Expect = 1.6
Identities = 14/55 (25%), Positives = 28/55 (50%)
Frame = +1
Query: 508 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 672
+PLF + + + +++ DR T+FF+P GG+ ++++HLF
Sbjct: 190 LPLFTWTTFVASALILFAFPPLTVGLALMMLDRLFGTNFFNPELGGNTVIWEHLF 244
>UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase
polypeptide I (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=20; cellular organisms|Rep: Alternative
Cytochrome c oxidase polypeptide I (Cytochrome BB3
subunit 1) (Oxidase BB(3) subunit 1) - Microscilla
marina ATCC 23134
Length = 635
Score = 34.7 bits (76), Expect = 2.1
Identities = 25/65 (38%), Positives = 32/65 (49%), Gaps = 10/65 (15%)
Frame = +1
Query: 508 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP----AG------GGDPIL 657
+PL + A ITA A +L+ DR+L TSFF AG GG P+L
Sbjct: 233 LPLTIWAFFITAIIGLLSFPVLFSAALLLIFDRSLGTSFFLSEIYIAGEALHHQGGSPVL 292
Query: 658 YQHLF 672
+QHLF
Sbjct: 293 FQHLF 297
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 34.7 bits (76), Expect = 2.1
Identities = 22/84 (26%), Positives = 32/84 (38%)
Frame = +3
Query: 3 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXX 182
HK +G +Y AEL PG ++ +N + T H
Sbjct: 38 HKQLGIMYIIMSFSFFFLGGLMALLIRAELFTPGLQFLSNEQFNQLFTMHGTVMLLLYGT 97
Query: 183 XXXXXXXXN*LVPLILGAPDIAFP 254
N ++PL +GAPD+AFP
Sbjct: 98 PIVWGFA-NYVLPLQIGAPDVAFP 120
>UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Mesorhizobium sp. (strain BNC1)
Length = 845
Score = 34.3 bits (75), Expect = 2.7
Identities = 19/55 (34%), Positives = 27/55 (49%)
Frame = +1
Query: 508 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 672
+P+F A+ I A A +L +R+ FF GGDP+L+QHLF
Sbjct: 207 MPIFAWAMLIFAAMIMIAFPAVILATMLLEIERSFGWPFFTAERGGDPLLWQHLF 261
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 33.5 bits (73), Expect = 4.8
Identities = 23/84 (27%), Positives = 30/84 (35%)
Frame = +3
Query: 3 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXX 182
HK +G +Y A+L P + D YN I T H
Sbjct: 53 HKKLGIMYIISAVIMLFRGGVDGLMMRAQLALPNNSFLDSNHYNEIFTTHGTIMIIFMAM 112
Query: 183 XXXXXXXXN*LVPLILGAPDIAFP 254
N +VPL +GA D+AFP
Sbjct: 113 PFLIGLI-NVVVPLQIGARDVAFP 135
>UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Alternative cytochrome c oxidase
polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=25; Bacteria|Rep: Alternative cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c
oxidase polypeptide I) (Cytochrome BB3 subunit 1)
(Oxidase BB(3) subunit 1) - Bradyrhizobium japonicum
Length = 591
Score = 33.5 bits (73), Expect = 4.8
Identities = 19/38 (50%), Positives = 22/38 (57%), Gaps = 10/38 (26%)
Frame = +1
Query: 589 ILLTDRNLNTSFFDPA----------GGGDPILYQHLF 672
+LL DR L TSFF P GGG P+L+QHLF
Sbjct: 238 MLLLDRLLGTSFFMPTLVEMGQLSKYGGGSPLLFQHLF 275
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 33.5 bits (73), Expect = 4.8
Identities = 17/29 (58%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Frame = +1
Query: 589 ILLTDRNLNTSFF-DPAGGGDPILYQHLF 672
+LL DRNL T FF +PAGG +L+ HLF
Sbjct: 217 LLLLDRNLGTEFFLNPAGGA--LLWDHLF 243
>UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3;
Halobacteriaceae|Rep: Cytochrome c oxidase subunit I -
Haloarcula marismortui (Halobacterium marismortui)
Length = 854
Score = 33.1 bits (72), Expect = 6.3
Identities = 25/84 (29%), Positives = 31/84 (36%)
Frame = +3
Query: 3 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXX 182
HKDIG LY EL + G+ + YN V+ H
Sbjct: 22 HKDIGVLYLITALFFLVFGGVLALLFRLELISSGADLLGSMGYNQAVSTHGLLMVFWFIS 81
Query: 183 XXXXXXXXN*LVPLILGAPDIAFP 254
N LVPL +GA D+AFP
Sbjct: 82 PFAFGFA-NYLVPLQIGADDLAFP 104
>UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2;
Eutetramorium sp. BLF m1|Rep: Cytochrome c oxidase
subunit I - Eutetramorium sp. BLF m1
Length = 201
Score = 32.7 bits (71), Expect = 8.3
Identities = 18/37 (48%), Positives = 22/37 (59%)
Frame = +1
Query: 508 IPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNT 618
I L ++ ITA AGAIT+LLTDRN+NT
Sbjct: 165 ISLLSWSILITAVLLLLSLPVLAGAITMLLTDRNMNT 201
>UniRef50_Q2ABI9 Cluster: NADH-ubiquinone oxidoreductase chain 2;
n=21; Neocoleoidea|Rep: NADH-ubiquinone oxidoreductase
chain 2 - Sepia officinalis (Common cuttlefish)
Length = 375
Score = 32.7 bits (71), Expect = 8.3
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +2
Query: 11 YWNIIFYFWYLIRNNWNIFKTFNS 82
YWNI+F+FWYLI ++ K NS
Sbjct: 348 YWNIMFHFWYLISFISHLAKINNS 371
>UniRef50_Q5ABE2 Cluster: Putative uncharacterized protein CLN3;
n=1; Candida albicans|Rep: Putative uncharacterized
protein CLN3 - Candida albicans (Yeast)
Length = 785
Score = 32.7 bits (71), Expect = 8.3
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Frame = -2
Query: 659 YKIGSPPPAGSKNDVFKFRSVNN---IVIAPAKTGSDNNNKNAVIPTAH 522
Y++ +PP + +KN K S NN IA T ++NNN N+ +P H
Sbjct: 572 YQMVTPPNSANKNSN-KSNSANNNNTTTIATTTTTTNNNNNNSQLPAPH 619
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 498,924,487
Number of Sequences: 1657284
Number of extensions: 7979153
Number of successful extensions: 17672
Number of sequences better than 10.0: 88
Number of HSP's better than 10.0 without gapping: 16832
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17602
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 51652897375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -