Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30687
(614 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P52813 Cluster: 40S ribosomal protein S3a; n=17; Eukary... 143 3e-33
UniRef50_P61247 Cluster: 40S ribosomal protein S3a; n=209; Eukar... 132 6e-30
UniRef50_UPI000041A636 Cluster: PREDICTED: similar to ribosomal ... 118 1e-25
UniRef50_A7NWS5 Cluster: Chromosome chr5 scaffold_2, whole genom... 117 2e-25
UniRef50_Q54ZW5 Cluster: 40S ribosomal protein S3A; n=2; Dictyos... 107 3e-22
UniRef50_Q5EMY6 Cluster: 40S ribosomal protein S1-like protein; ... 99 7e-20
UniRef50_A3F4R3 Cluster: Ribosomal protein S3a; n=1; Taenia asia... 98 2e-19
UniRef50_Q23DE3 Cluster: Ribosomal S3Ae family protein; n=1; Tet... 95 1e-18
UniRef50_UPI000049A095 Cluster: 40S ribosomal protein S3a; n=3; ... 88 2e-16
UniRef50_A6NFQ6 Cluster: Uncharacterized protein ENSP00000341960... 86 5e-16
UniRef50_Q9U4U0 Cluster: Antigen; n=10; Trypanosomatidae|Rep: An... 85 2e-15
UniRef50_UPI00005042B8 Cluster: UPI00005042B8 related cluster; n... 84 2e-15
UniRef50_A0CCR3 Cluster: Chromosome undetermined scaffold_168, w... 79 6e-14
UniRef50_A2FDS0 Cluster: Ribosomal protein S3Ae, putative; n=4; ... 66 5e-10
UniRef50_Q7QT21 Cluster: GLP_675_17761_17015; n=1; Giardia lambl... 62 1e-08
UniRef50_Q8SS05 Cluster: 40S RIBOSOMAL PROTEIN S3A; n=1; Encepha... 62 1e-08
UniRef50_Q9AW90 Cluster: 40S ribosomal Protein S3a; n=1; Guillar... 56 5e-07
UniRef50_Q8ZT21 Cluster: 30S ribosomal protein S3Ae; n=4; Pyroba... 49 1e-04
UniRef50_Q8Q0F2 Cluster: 30S ribosomal protein S3Ae; n=6; Euryar... 49 1e-04
UniRef50_A4D1I1 Cluster: Similar to ribosomal protein S3a; 40S r... 46 7e-04
UniRef50_O27964 Cluster: 30S ribosomal protein S3Ae; n=1; Archae... 46 0.001
UniRef50_Q3SAA8 Cluster: SSU ribosomal protein S3AE; n=2; enviro... 45 0.002
UniRef50_Q8TVD1 Cluster: 30S ribosomal protein S3Ae; n=1; Methan... 44 0.003
UniRef50_Q0W2K9 Cluster: 30S ribosomal protein S3AE; n=2; Euryar... 41 0.020
UniRef50_UPI00015608D3 Cluster: PREDICTED: similar to ribosomal ... 40 0.036
UniRef50_Q9YCV8 Cluster: 30S ribosomal protein S3Ae; n=12; Archa... 40 0.047
UniRef50_A7D401 Cluster: Ribosomal protein S3Ae; n=2; Halorubrum... 38 0.14
UniRef50_Q6LZG0 Cluster: 30S ribosomal protein S3Ae; n=6; Methan... 38 0.14
UniRef50_Q2BPA5 Cluster: Putative uncharacterized protein; n=1; ... 38 0.25
UniRef50_A3H9G4 Cluster: Ribosomal protein S3Ae; n=1; Caldivirga... 37 0.33
UniRef50_Q5V296 Cluster: 30S ribosomal protein S3Ae; n=4; Haloba... 37 0.33
UniRef50_A4YCU2 Cluster: Ribosomal protein S3Ae; n=1; Metallosph... 37 0.44
UniRef50_A5UKY8 Cluster: Small subunit ribosomal protein S3Ae; n... 36 0.77
UniRef50_A1RXX5 Cluster: Ribosomal protein S3Ae; n=1; Thermofilu... 36 0.77
UniRef50_A4GI78 Cluster: Ribosomal protein S3AE; n=1; uncultured... 36 1.0
UniRef50_Q2UC38 Cluster: Predicted protein; n=1; Aspergillus ory... 35 1.3
UniRef50_A0RTS7 Cluster: Ribosomal protein S3AE; n=2; Thermoprot... 35 1.3
UniRef50_Q4SVA9 Cluster: Chromosome undetermined SCAF13769, whol... 34 2.3
UniRef50_Q2W9B7 Cluster: Putative uncharacterized protein; n=3; ... 34 3.1
UniRef50_Q0UV49 Cluster: Putative uncharacterized protein; n=1; ... 34 3.1
UniRef50_Q6KYU3 Cluster: 30S ribosomal protein S3Ae; n=2; Thermo... 34 3.1
UniRef50_Q6IEK0 Cluster: Putative NTPDase; n=1; Trypanosoma bruc... 33 4.1
UniRef50_Q978Z2 Cluster: 30S ribosomal protein S3Ae; n=2; Thermo... 33 4.1
UniRef50_A2QIG4 Cluster: Putative uncharacterized protein; n=1; ... 33 5.4
UniRef50_Q9EST5 Cluster: Acidic leucine-rich nuclear phosphoprot... 33 5.4
UniRef50_Q4SL53 Cluster: Chromosome 17 SCAF14563, whole genome s... 27 6.6
UniRef50_UPI0000E24310 Cluster: PREDICTED: hypothetical protein;... 33 7.1
UniRef50_Q5GT20 Cluster: Predicted protein, WF-1; n=1; Wolbachia... 33 7.1
UniRef50_Q0KDB8 Cluster: L-Amino-acid oxidase; n=3; cellular org... 33 7.1
UniRef50_A7RQH6 Cluster: Predicted protein; n=2; Nematostella ve... 33 7.1
UniRef50_Q1DU10 Cluster: Predicted protein; n=1; Coccidioides im... 33 7.1
UniRef50_UPI000155EEEB Cluster: PREDICTED: similar to leukocyte ... 32 9.4
UniRef50_A1ZNL6 Cluster: PKD domain protein; n=1; Microscilla ma... 32 9.4
UniRef50_Q01HQ6 Cluster: OSIGBa0153E02-OSIGBa0093I20.19 protein;... 32 9.4
UniRef50_Q4Q8H6 Cluster: Endonuclease/exonuclease/phosphatase-li... 32 9.4
>UniRef50_P52813 Cluster: 40S ribosomal protein S3a; n=17;
Eukaryota|Rep: 40S ribosomal protein S3a - Anopheles
gambiae (African malaria mosquito)
Length = 269
Score = 143 bits (346), Expect = 3e-33
Identities = 71/113 (62%), Positives = 88/113 (77%), Gaps = 2/113 (1%)
Frame = +2
Query: 2 ADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVK 181
ADLQ + DAERSFRKF+L+AE V GR+VL NFHGM LTTDKLR MVKKWQTLIE ++DVK
Sbjct: 72 ADLQNEPDAERSFRKFKLVAESVNGRDVLTNFHGMALTTDKLRSMVKKWQTLIECSVDVK 131
Query: 182 TTDGYVLRVFCIGFTNKDSLSQRKS--ATPSTLRSEQSERKCVKSLHATSLTL 334
TTDG++LRVFCIGFT KDS+SQRK+ A S +++ +++ + TS L
Sbjct: 132 TTDGFMLRVFCIGFTIKDSMSQRKTCYAQHSQIKNIRAKMTAIIKREITSTDL 184
Score = 130 bits (314), Expect = 3e-29
Identities = 58/91 (63%), Positives = 74/91 (81%)
Frame = +1
Query: 256 CYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIR 435
CYAQH+Q++ IR KM II R++T+++L+ VV KL+PDSIAKDIEKAC +YPL DV IR
Sbjct: 157 CYAQHSQIKNIRAKMTAIIKREITSTDLKGVVEKLLPDSIAKDIEKACQVVYPLHDVYIR 216
Query: 436 KVKVLKRPRFEISKLMELHGEGGGARGKPET 528
KVKVLK+PRF++S LMELHG+GGG + T
Sbjct: 217 KVKVLKKPRFDLSSLMELHGDGGGKAAEVST 247
Score = 35.1 bits (77), Expect = 1.3
Identities = 19/37 (51%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +3
Query: 468 DLEVDGTSRRRRWSKGEA-GDKSERPEGYEPPVQESV 575
+L DG + S G A G +RPEGYEPPVQ SV
Sbjct: 233 ELHGDGGGKAAEVSTGAASGVVVDRPEGYEPPVQASV 269
>UniRef50_P61247 Cluster: 40S ribosomal protein S3a; n=209;
Eukaryota|Rep: 40S ribosomal protein S3a - Homo sapiens
(Human)
Length = 264
Score = 132 bits (319), Expect = 6e-30
Identities = 60/84 (71%), Positives = 71/84 (84%)
Frame = +1
Query: 259 YAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRK 438
YAQH QVR IRKKM EI+TR+V ++L+EVVNKLIPDSI KDIEKAC IYPL DV +RK
Sbjct: 155 YAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRK 214
Query: 439 VKVLKRPRFEISKLMELHGEGGGA 510
VK+LK+P+FE+ KLMELHGEG +
Sbjct: 215 VKMLKKPKFELGKLMELHGEGSSS 238
Score = 118 bits (284), Expect = 1e-25
Identities = 58/102 (56%), Positives = 75/102 (73%)
Frame = +2
Query: 2 ADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVK 181
ADLQ D E +FRKF+LI E VQG+N L NFHGMDLT DK+ MVKKWQT+IEA++DVK
Sbjct: 72 ADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVK 128
Query: 182 TTDGYVLRVFCIGFTNKDSLSQRKSATPSTLRSEQSERKCVK 307
TTDGY+LR+FC+GFT K + RK++ + Q +K ++
Sbjct: 129 TTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMME 170
Score = 35.9 bits (79), Expect = 0.77
Identities = 20/47 (42%), Positives = 26/47 (55%)
Frame = +3
Query: 435 KGESVEEAPFRDLEVDGTSRRRRWSKGEAGDKSERPEGYEPPVQESV 575
K E +L +G+S + + E G K ER +GYEPPVQESV
Sbjct: 219 KKPKFELGKLMELHGEGSSSGKA-TGDETGAKVERADGYEPPVQESV 264
>UniRef50_UPI000041A636 Cluster: PREDICTED: similar to ribosomal
protein S3a isoform 5; n=18; Eutheria|Rep: PREDICTED:
similar to ribosomal protein S3a isoform 5 - Homo
sapiens
Length = 211
Score = 118 bits (284), Expect = 1e-25
Identities = 57/90 (63%), Positives = 69/90 (76%), Gaps = 2/90 (2%)
Frame = +1
Query: 286 IRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRF 465
IRKKM EI+TR+V ++L+EVVNKLIPDSI KD+EKAC IYPL DV +RKVK+LK+P+F
Sbjct: 111 IRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDVEKACQSIYPLHDVFVRKVKMLKKPKF 170
Query: 466 EISKLMELHGEG--GGARGKPETSLNGRRA 549
E+ KLMELHGEG G ET + RA
Sbjct: 171 ELGKLMELHGEGCSSGKATGDETGVKVERA 200
Score = 58.0 bits (134), Expect = 2e-07
Identities = 32/63 (50%), Positives = 42/63 (66%)
Frame = +2
Query: 2 ADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVK 181
ADLQ D E +FRKF+LI E VQG+N L NFHG+DLT+DK+ ++K I +V+
Sbjct: 69 ADLQND---EVAFRKFKLITEDVQGKNCLTNFHGVDLTSDKITSQIRKKMMEIMTR-EVQ 124
Query: 182 TTD 190
T D
Sbjct: 125 TND 127
>UniRef50_A7NWS5 Cluster: Chromosome chr5 scaffold_2, whole genome
shotgun sequence; n=3; core eudicotyledons|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 656
Score = 117 bits (282), Expect = 2e-25
Identities = 59/99 (59%), Positives = 71/99 (71%)
Frame = +2
Query: 2 ADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVK 181
ADLQAD D +++RK RL AE VQGRNVL NF GMD TTDKLR +V+KWQTLIEA++DVK
Sbjct: 466 ADLQADED--QAYRKIRLRAEDVQGRNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVK 523
Query: 182 TTDGYVLRVFCIGFTNKDSLSQRKSATPSTLRSEQSERK 298
TTD Y LR+FCI FT K +K+ + + Q RK
Sbjct: 524 TTDNYTLRLFCIAFTKKRVNQNKKTCYAQSSQIRQIRRK 562
Score = 106 bits (255), Expect = 4e-22
Identities = 51/106 (48%), Positives = 76/106 (71%)
Frame = +1
Query: 181 DNRWIRSTCLLHWFHQ*GLLEPTQECYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKL 360
DN +R C+ F + + + + CYAQ +Q+R IR+KM EI+T T+ +L+E+V K
Sbjct: 526 DNYTLRLFCIA--FTKKRVNQNKKTCYAQSSQIRQIRRKMREIMTNMATSCDLKELVKKF 583
Query: 361 IPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHGE 498
IP+SI ++IEKA IYPL++V IRKVK+LK P+F++ KLME+HG+
Sbjct: 584 IPESIGREIEKATSSIYPLQNVYIRKVKILKAPKFDLGKLMEVHGD 629
>UniRef50_Q54ZW5 Cluster: 40S ribosomal protein S3A; n=2;
Dictyostelium discoideum|Rep: 40S ribosomal protein S3A
- Dictyostelium discoideum AX4
Length = 273
Score = 107 bits (256), Expect = 3e-22
Identities = 53/100 (53%), Positives = 67/100 (67%)
Frame = +2
Query: 23 DAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVL 202
D + FRK +L AE V+GRNVL NF+GMDLT+DKLR ++ KW TLIE +DVKTTDGY L
Sbjct: 75 DESQVFRKIKLRAEEVEGRNVLTNFYGMDLTSDKLRSLIHKWSTLIECFVDVKTTDGYFL 134
Query: 203 RVFCIGFTNKDSLSQRKSATPSTLRSEQSERKCVKSLHAT 322
RVF I FT K ++K++ T R + +K V L T
Sbjct: 135 RVFAICFTKKGESQKKKTSYAKTSRVKAIRKKMVDILTET 174
Score = 58.0 bits (134), Expect = 2e-07
Identities = 37/105 (35%), Positives = 62/105 (59%), Gaps = 14/105 (13%)
Frame = +1
Query: 220 FHQ*GLLEPTQECYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLI------------ 363
F + G + + YA+ ++V+AIRKKM +I+T V++++L+ VV+ LI
Sbjct: 141 FTKKGESQKKKTSYAKTSRVKAIRKKMVDILTETVSSNDLKTVVDYLIGVSLNGVTTNAS 200
Query: 364 --PDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELH 492
++A+ I I+P+ +V IRKVKVLK P+ + +KL EL+
Sbjct: 201 GFAPTLAEKIRIEGSSIFPIHNVFIRKVKVLKTPKVDAAKLSELY 245
>UniRef50_Q5EMY6 Cluster: 40S ribosomal protein S1-like protein;
n=9; Dikarya|Rep: 40S ribosomal protein S1-like protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 256
Score = 99.1 bits (236), Expect = 7e-20
Identities = 51/113 (45%), Positives = 74/113 (65%), Gaps = 2/113 (1%)
Frame = +2
Query: 2 ADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVK 181
ADLQ D D +FRK +L + VQG+N L NFHG+D T+DKLR +V+KWQ+LIEAN+ VK
Sbjct: 71 ADLQKDED--HAFRKIKLRVDEVQGKNCLTNFHGLDFTSDKLRSLVRKWQSLIEANVTVK 128
Query: 182 TTDGYVLRVFCIGFTNK--DSLSQRKSATPSTLRSEQSERKCVKSLHATSLTL 334
TTD Y+LR+F I T + + + + A S +R+ + + + A++ TL
Sbjct: 129 TTDDYLLRLFAIAVTKRRPNQIKKTTYAASSQIRAIRRKMTEIIQREASTCTL 181
Score = 98.3 bits (234), Expect = 1e-19
Identities = 44/80 (55%), Positives = 63/80 (78%)
Frame = +1
Query: 259 YAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRK 438
YA +Q+RAIR+KM EII R+ + L+++ NKLIP+ I ++IEKA GIYPL++V IRK
Sbjct: 155 YAASSQIRAIRRKMTEIIQREASTCTLQQLTNKLIPEVIGREIEKATQGIYPLQNVHIRK 214
Query: 439 VKVLKRPRFEISKLMELHGE 498
VK+LK+P+F++ L+ LHGE
Sbjct: 215 VKLLKQPKFDLGGLLALHGE 234
>UniRef50_A3F4R3 Cluster: Ribosomal protein S3a; n=1; Taenia
asiatica|Rep: Ribosomal protein S3a - Taenia asiatica
(Asian tapeworm)
Length = 183
Score = 97.9 bits (233), Expect = 2e-19
Identities = 50/90 (55%), Positives = 60/90 (66%)
Frame = +2
Query: 38 FRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 217
FRKF+L E VQGR+ L NFHGMDLT DKL MV KWQ+ IEA++DVKTTDGY LR F I
Sbjct: 7 FRKFKLQVEDVQGRHCLTNFHGMDLTHDKLCGMVLKWQSTIEAHVDVKTTDGYTLRFFVI 66
Query: 218 GFTNKDSLSQRKSATPSTLRSEQSERKCVK 307
FT K Q+ A T R ++ + V+
Sbjct: 67 AFTKKQE-DQKSHAYAQTTRIKKLRAEIVE 95
Score = 85.4 bits (202), Expect = 1e-15
Identities = 35/81 (43%), Positives = 56/81 (69%)
Frame = +1
Query: 259 YAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRK 438
YAQ T+++ +R ++ E++ R+V +L+ VV KLIPDSI +D I+PL +RK
Sbjct: 80 YAQTTRIKKLRAEIVEVVQREVARCDLKSVVQKLIPDSIGQDAMNEASSIFPLSGALVRK 139
Query: 439 VKVLKRPRFEISKLMELHGEG 501
VKVLK+P+ ++ +++ELH EG
Sbjct: 140 VKVLKKPKLDLGRILELHSEG 160
>UniRef50_Q23DE3 Cluster: Ribosomal S3Ae family protein; n=1;
Tetrahymena thermophila SB210|Rep: Ribosomal S3Ae family
protein - Tetrahymena thermophila SB210
Length = 265
Score = 95.1 bits (226), Expect = 1e-18
Identities = 42/95 (44%), Positives = 65/95 (68%)
Frame = +2
Query: 2 ADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVK 181
ADL+ D ++++RK +L+ + V GRN +F+G+D+T D+L M++KWQTLIEA +D K
Sbjct: 73 ADLK-DNSNDKAWRKVKLVIDEVDGRNAKTSFYGLDITRDRLCSMIRKWQTLIEARVDCK 131
Query: 182 TTDGYVLRVFCIGFTNKDSLSQRKSATPSTLRSEQ 286
T DGY++RVF + FT K S ++ S + +S Q
Sbjct: 132 TNDGYIIRVFTLAFTKKTSAGKQSSTSTCYAKSSQ 166
Score = 77.0 bits (181), Expect = 3e-13
Identities = 40/103 (38%), Positives = 59/103 (57%)
Frame = +1
Query: 232 GLLEPTQECYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIY 411
G T CYA+ +QVRAIR+K+ IT + + E LI + K IEK I+
Sbjct: 152 GKQSSTSTCYAKSSQVRAIRRKINTFITNEAAKLGIAEFSKNLIGEDYTKKIEKETKNIF 211
Query: 412 PLRDVCIRKVKVLKRPRFEISKLMELHGEGGGARGKPETSLNG 540
PL+++ IRKVKVLKRP+ + +K+ EL+ +G+ T +G
Sbjct: 212 PLQNITIRKVKVLKRPKLDATKIAELYSH--EKKGEKATGRDG 252
>UniRef50_UPI000049A095 Cluster: 40S ribosomal protein S3a; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S3a - Entamoeba histolytica HM-1:IMSS
Length = 257
Score = 87.8 bits (208), Expect = 2e-16
Identities = 38/71 (53%), Positives = 55/71 (77%)
Frame = +2
Query: 47 FRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFT 226
++ E V G++ L FHG+ LTTDKLR +VKKW TLIE ++DVKTTDG+++R+FCIGFT
Sbjct: 86 YKFKCEDVNGKDCLMIFHGLKLTTDKLRSIVKKWCTLIETSVDVKTTDGHLIRIFCIGFT 145
Query: 227 NKDSLSQRKSA 259
++ S +K++
Sbjct: 146 SRKSNQIKKTS 156
>UniRef50_A6NFQ6 Cluster: Uncharacterized protein ENSP00000341960;
n=40; Coelomata|Rep: Uncharacterized protein
ENSP00000341960 - Homo sapiens (Human)
Length = 79
Score = 86.2 bits (204), Expect = 5e-16
Identities = 37/53 (69%), Positives = 44/53 (83%)
Frame = +1
Query: 352 NKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHGEGGGA 510
NKLIPDSI KDIEKAC IYPL DV +RKVK+LK+P+FE+ KLMELHG+ +
Sbjct: 1 NKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGDSSSS 53
Score = 36.7 bits (81), Expect = 0.44
Identities = 20/36 (55%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +3
Query: 471 LEVDGTSRRRRWSKG-EAGDKSERPEGYEPPVQESV 575
+E+ G S + G E G K ER EGYEPPVQESV
Sbjct: 44 MELHGDSSSSGKAIGDETGAKVERAEGYEPPVQESV 79
>UniRef50_Q9U4U0 Cluster: Antigen; n=10; Trypanosomatidae|Rep:
Antigen - Leishmania major
Length = 264
Score = 84.6 bits (200), Expect = 2e-15
Identities = 35/85 (41%), Positives = 54/85 (63%)
Frame = +2
Query: 2 ADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVK 181
ADL E ++RK R + VQGRN+L FH M++TTDK+ +++KW T +E ++VK
Sbjct: 72 ADLNQSAGEEEAYRKVRFTVQEVQGRNLLTQFHSMEVTTDKMANLLRKWCTTMETTVEVK 131
Query: 182 TTDGYVLRVFCIGFTNKDSLSQRKS 256
T DGY +R+F + FT + Q ++
Sbjct: 132 TADGYTMRLFVVAFTKPQANQQSRN 156
Score = 61.3 bits (142), Expect = 2e-08
Identities = 25/85 (29%), Positives = 55/85 (64%)
Frame = +1
Query: 241 EPTQECYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLR 420
+ ++ CYA+ V+ +R ++ ++I R ++ +++E V+ L + ++ + + C+ I PLR
Sbjct: 152 QQSRNCYAKQRLVKWLRMRITKMIKRRLSKVQIKEAVSLLTRNVLSDALVRRCNPILPLR 211
Query: 421 DVCIRKVKVLKRPRFEISKLMELHG 495
++ IRKV+V++ P+F+ L+ HG
Sbjct: 212 ELRIRKVRVVRTPKFDAQALLSAHG 236
>UniRef50_UPI00005042B8 Cluster: UPI00005042B8 related cluster; n=1;
Rattus norvegicus|Rep: UPI00005042B8 UniRef100 entry -
Rattus norvegicus
Length = 237
Score = 84.2 bits (199), Expect = 2e-15
Identities = 39/80 (48%), Positives = 57/80 (71%)
Frame = +1
Query: 262 AQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKV 441
AQ+ QV I +I+ D ++L+EV+NKL+PD++ KD+EKAC IYPL DV +RKV
Sbjct: 141 AQYQQVHQIWLITIQIM--DQRRTDLKEVLNKLVPDNVGKDVEKACQFIYPLHDVFVRKV 198
Query: 442 KVLKRPRFEISKLMELHGEG 501
K+L++P+ ++ KL ELH G
Sbjct: 199 KILQKPKLDLGKLPELHALG 218
Score = 70.5 bits (165), Expect = 3e-11
Identities = 34/62 (54%), Positives = 46/62 (74%)
Frame = +2
Query: 41 RKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIG 220
RKF+LI E ++G+N L N +GMDLT DK V KWQ ++EA+ DVKT D Y+L +FC+G
Sbjct: 67 RKFKLITEDMRGKNGLTNSYGMDLTWDKRCNKVIKWQ-MVEAHADVKTADYYLLCLFCVG 125
Query: 221 FT 226
+T
Sbjct: 126 YT 127
>UniRef50_A0CCR3 Cluster: Chromosome undetermined scaffold_168,
whole genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_168,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 291
Score = 79.4 bits (187), Expect = 6e-14
Identities = 39/102 (38%), Positives = 62/102 (60%)
Frame = +2
Query: 2 ADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVK 181
ADLQ +D + ++RK +LI + V+G +F+G+D T DK+ M+KK QTLIE ++ +
Sbjct: 69 ADLQGQSD-QMAWRKVKLIIDDVEGTRCRTSFYGLDSTKDKIFGMIKKRQTLIETQVEAR 127
Query: 182 TTDGYVLRVFCIGFTNKDSLSQRKSATPSTLRSEQSERKCVK 307
+ DGY+LR+F I FT QRK+ + + +K V+
Sbjct: 128 SQDGYILRIFVIAFTKSIKNQQRKTTYAQRSQIKDIRKKIVE 169
Score = 72.1 bits (169), Expect = 1e-11
Identities = 30/80 (37%), Positives = 56/80 (70%)
Frame = +1
Query: 259 YAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRK 438
YAQ +Q++ IRKK+ EI+ ++V+ + +++ +S+AK+I KA I+PL+++ +RK
Sbjct: 154 YAQRSQIKDIRKKIVEIVLKEVSKKSITQLLGFFNQESLAKEIGKATRTIFPLQNITLRK 213
Query: 439 VKVLKRPRFEISKLMELHGE 498
VK++KRP+ + KL E + +
Sbjct: 214 VKLVKRPKVDAQKLREFYDD 233
>UniRef50_A2FDS0 Cluster: Ribosomal protein S3Ae, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein S3Ae,
putative - Trichomonas vaginalis G3
Length = 247
Score = 66.5 bits (155), Expect = 5e-10
Identities = 34/97 (35%), Positives = 56/97 (57%)
Frame = +2
Query: 23 DAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVL 202
D ++R F G V F GM LT DKL +++K++T+I+A++D KT DG++L
Sbjct: 73 DLSHAYRLFSW-RSIAAGSEVYTQFAGMRLTHDKLDSIMRKYRTMIDASVDAKTADGFIL 131
Query: 203 RVFCIGFTNKDSLSQRKSATPSTLRSEQSERKCVKSL 313
R+F IGFT K + S + ++ ++ Q +K+L
Sbjct: 132 RLFTIGFTKKLANSHKNHTYANSHKARQVRDVMIKAL 168
>UniRef50_Q7QT21 Cluster: GLP_675_17761_17015; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_675_17761_17015 - Giardia lamblia
ATCC 50803
Length = 248
Score = 61.7 bits (143), Expect = 1e-08
Identities = 32/84 (38%), Positives = 45/84 (53%)
Frame = +2
Query: 5 DLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKT 184
DL + KF L + V L NFHGMD+T K + +K I+ +D+ T
Sbjct: 70 DLNPGAEDLNGNTKFYLQTQLVSDGKCLTNFHGMDITRHKYGSLFRKGCDCIDVFMDIPT 129
Query: 185 TDGYVLRVFCIGFTNKDSLSQRKS 256
TDGY+LRVF I FT++ +RK+
Sbjct: 130 TDGYLLRVFVIAFTDRFRFQRRKN 153
Score = 41.9 bits (94), Expect = 0.012
Identities = 23/81 (28%), Positives = 41/81 (50%)
Frame = +1
Query: 250 QECYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVC 429
+ C+ + +R +R + E + ++ + +V KL + + +A I RDV
Sbjct: 152 KNCHVKGRVIRMMRAGIYETLHNELGKVSIPVLVTKLSNFEVNAKLTEALQKITMCRDVM 211
Query: 430 IRKVKVLKRPRFEISKLMELH 492
IR+VKV+KRPR + L +H
Sbjct: 212 IRRVKVVKRPRNTMELLSTMH 232
>UniRef50_Q8SS05 Cluster: 40S RIBOSOMAL PROTEIN S3A; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S3A
- Encephalitozoon cuniculi
Length = 189
Score = 61.7 bits (143), Expect = 1e-08
Identities = 33/77 (42%), Positives = 44/77 (57%)
Frame = +2
Query: 2 ADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVK 181
ADL + D RKF ++G + F GM+LT+DK + M+KKW TLIEA D+
Sbjct: 23 ADLTGNNDV--GHRKFIFKIGDIKGSECVGFFDGMELTSDKHKAMIKKWHTLIEAQKDIV 80
Query: 182 TTDGYVLRVFCIGFTNK 232
DG V RVF +G T +
Sbjct: 81 AKDGSVFRVFVMGVTRR 97
Score = 58.0 bits (134), Expect = 2e-07
Identities = 22/66 (33%), Positives = 45/66 (68%)
Frame = +1
Query: 256 CYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIR 435
CY +H+ + IRK M ++I +++ ++++++ KL +++ K IE+ I+PL++ C+R
Sbjct: 106 CYVKHSDEKKIRKIMFDVIEEELSGCDVQKIMKKLANETVGKRIEELGSEIFPLQNCCVR 165
Query: 436 KVKVLK 453
KVK +K
Sbjct: 166 KVKTIK 171
>UniRef50_Q9AW90 Cluster: 40S ribosomal Protein S3a; n=1; Guillardia
theta|Rep: 40S ribosomal Protein S3a - Guillardia theta
(Cryptomonas phi)
Length = 219
Score = 56.4 bits (130), Expect = 5e-07
Identities = 24/54 (44%), Positives = 35/54 (64%)
Frame = +2
Query: 95 FHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKS 256
FHG+ LT DK+ ++KKW TLIE ++ KT DGY L++F I + K + K+
Sbjct: 96 FHGLTLTRDKICSLIKKWHTLIEVEVNFKTKDGYFLKLFLIAQSKKPKNMKSKT 149
Score = 48.0 bits (109), Expect = 2e-04
Identities = 20/65 (30%), Positives = 42/65 (64%)
Frame = +1
Query: 259 YAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRK 438
Y +Q RA+R+++ +II ++ N ++++ ++++ I + IE C I+P+ V IRK
Sbjct: 151 YINSSQKRALRRRITDIIIKEGINMDIKDFIHRIYSLKIYEKIEINCSKIFPIHQVNIRK 210
Query: 439 VKVLK 453
+KV++
Sbjct: 211 IKVVE 215
>UniRef50_Q8ZT21 Cluster: 30S ribosomal protein S3Ae; n=4;
Pyrobaculum|Rep: 30S ribosomal protein S3Ae -
Pyrobaculum aerophilum
Length = 221
Score = 48.8 bits (111), Expect = 1e-04
Identities = 25/72 (34%), Positives = 40/72 (55%)
Frame = +2
Query: 44 KFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGF 223
K + V+G L F G++LT D +R +V+K + + A +VKT DG V+R+ +G
Sbjct: 74 KLKFQIHRVEGLKALTRFKGLELTRDYIRSLVRKGTSKVTAITEVKTKDGMVMRIAVLGI 133
Query: 224 TNKDSLSQRKSA 259
T + +KSA
Sbjct: 134 TTHRIGTAQKSA 145
Score = 39.5 bits (88), Expect = 0.062
Identities = 20/62 (32%), Positives = 34/62 (54%)
Frame = +1
Query: 274 QVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLK 453
Q A+RKKM E + + + + + +++ ++A D+ I P+R V I K+KVLK
Sbjct: 142 QKSAMRKKMIETLVKKAAELDSGQFLKEILEGTLAADLFIVAKKIAPMRKVEIAKIKVLK 201
Query: 454 RP 459
P
Sbjct: 202 YP 203
>UniRef50_Q8Q0F2 Cluster: 30S ribosomal protein S3Ae; n=6;
Euryarchaeota|Rep: 30S ribosomal protein S3Ae -
Methanosarcina mazei (Methanosarcina frisia)
Length = 204
Score = 48.8 bits (111), Expect = 1e-04
Identities = 29/79 (36%), Positives = 44/79 (55%)
Frame = +2
Query: 23 DAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVL 202
D ++ K L V G + G +LTTD +R +VK+ + I+AN+DV+T DG+V+
Sbjct: 58 DMTKNNTKVILRVNNVVGDIATTDLMGHELTTDYVRSIVKRQTSRIDANVDVRTKDGFVI 117
Query: 203 RVFCIGFTNKDSLSQRKSA 259
RV FT K + S + A
Sbjct: 118 RVKPTCFTIKRARSSQMQA 136
Score = 37.9 bits (84), Expect = 0.19
Identities = 20/66 (30%), Positives = 37/66 (56%)
Frame = +1
Query: 262 AQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKV 441
A+ +Q++AIR+ M +I+ + + ++ + + I ++ I + IYPLR V IRK
Sbjct: 129 ARSSQMQAIREMMVDIVKKRASETDFETFMQEAILGRLSAAIYRQAKFIYPLRRVEIRKT 188
Query: 442 KVLKRP 459
+V P
Sbjct: 189 QVEAMP 194
>UniRef50_A4D1I1 Cluster: Similar to ribosomal protein S3a; 40S
ribosomal protein S3a; v-fos transformation effector
protein 1; n=2; Eutheria|Rep: Similar to ribosomal
protein S3a; 40S ribosomal protein S3a; v-fos
transformation effector protein 1 - Homo sapiens (Human)
Length = 119
Score = 46.0 bits (104), Expect = 7e-04
Identities = 17/31 (54%), Positives = 26/31 (83%)
Frame = +1
Query: 418 RDVCIRKVKVLKRPRFEISKLMELHGEGGGA 510
R +C++KVK+LK+P+FE+ KLMELHG+ +
Sbjct: 63 RVMCLKKVKMLKKPKFELGKLMELHGDSSSS 93
Score = 36.7 bits (81), Expect = 0.44
Identities = 20/36 (55%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +3
Query: 471 LEVDGTSRRRRWSKG-EAGDKSERPEGYEPPVQESV 575
+E+ G S + G E G K ER EGYEPPVQESV
Sbjct: 84 MELHGDSSSSGKAIGDETGAKVERAEGYEPPVQESV 119
>UniRef50_O27964 Cluster: 30S ribosomal protein S3Ae; n=1;
Archaeoglobus fulgidus|Rep: 30S ribosomal protein S3Ae -
Archaeoglobus fulgidus
Length = 211
Score = 45.6 bits (103), Expect = 0.001
Identities = 27/92 (29%), Positives = 45/92 (48%)
Frame = +2
Query: 2 ADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVK 181
A+L D + +++K V G N F +LT + L + ++ + IE +DV
Sbjct: 54 AELTNDYSNQNTYKKLIFKVYRVAGDNAYTKFWRFELTREYLNSLTRRRTSKIEDIVDVT 113
Query: 182 TTDGYVLRVFCIGFTNKDSLSQRKSATPSTLR 277
T DGY LRV + FT + + +K A + +R
Sbjct: 114 TADGYKLRVKSVVFTVRRCKTSQKRAIRAIMR 145
Score = 37.5 bits (83), Expect = 0.25
Identities = 19/63 (30%), Positives = 34/63 (53%)
Frame = +1
Query: 271 TQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVL 450
+Q RAIR M +I+ ++ + + + + + +I K IYP+R V IRK+++L
Sbjct: 135 SQKRAIRAIMRQIVVEKASSLNFVQFLQECVLGKVPAEIYKNAKKIYPIRRVEIRKIELL 194
Query: 451 KRP 459
P
Sbjct: 195 AEP 197
>UniRef50_Q3SAA8 Cluster: SSU ribosomal protein S3AE; n=2;
environmental samples|Rep: SSU ribosomal protein S3AE -
uncultured euryarchaeote Alv-FOS1
Length = 227
Score = 44.8 bits (101), Expect = 0.002
Identities = 20/47 (42%), Positives = 32/47 (68%)
Frame = +2
Query: 68 VQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRV 208
VQG N F G D+TTD +R M+++ ++ I+ +V+T+DGY +RV
Sbjct: 77 VQGTNAYTRFIGHDMTTDYIRRMIRRRRSRIDMIFNVETSDGYRMRV 123
Score = 41.1 bits (92), Expect = 0.020
Identities = 23/66 (34%), Positives = 35/66 (53%)
Frame = +1
Query: 286 IRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRF 465
IRKK+ E +T E V +I D +++ K IYP+R + IRK +VL P
Sbjct: 141 IRKKIQEYLTEKARAMTFSEYVKYIISDDAPRELSKELKVIYPVRRIEIRKSEVLHFPEE 200
Query: 466 EISKLM 483
+I +L+
Sbjct: 201 KIVELV 206
>UniRef50_Q8TVD1 Cluster: 30S ribosomal protein S3Ae; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S3Ae -
Methanopyrus kandleri
Length = 211
Score = 44.0 bits (99), Expect = 0.003
Identities = 24/70 (34%), Positives = 41/70 (58%), Gaps = 4/70 (5%)
Frame = +1
Query: 262 AQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIP----DSIAKDIEKACHGIYPLRDVC 429
A+ +Q RAIRK+M ++I + + E + + + +SI + I++A IYP+R
Sbjct: 122 AKTSQQRAIRKEMFKVIEENAKECDFDEFIRRCLSISEEESIPEQIKEAGRKIYPIRQAE 181
Query: 430 IRKVKVLKRP 459
IRK +VL+ P
Sbjct: 182 IRKTEVLEEP 191
Score = 41.1 bits (92), Expect = 0.020
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Frame = +2
Query: 68 VQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDS-LS 244
V+G F G L D +R +V++ + I+ IDV T DGY +RV + FT + + S
Sbjct: 66 VEGTTAYSKFEGHRLMRDYVRSLVRRGTSRIDGVIDVVTKDGYKVRVAGLAFTTRRAKTS 125
Query: 245 QRKSATPSTLR-SEQSERKC 301
Q+++ + E++ ++C
Sbjct: 126 QQRAIRKEMFKVIEENAKEC 145
>UniRef50_Q0W2K9 Cluster: 30S ribosomal protein S3AE; n=2;
Euryarchaeota|Rep: 30S ribosomal protein S3AE -
Uncultured methanogenic archaeon RC-I
Length = 225
Score = 41.1 bits (92), Expect = 0.020
Identities = 26/76 (34%), Positives = 41/76 (53%)
Frame = +2
Query: 5 DLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKT 184
D+ D + FR+ E + G + +F G +LT D +R +VK+ + I+AN+ V T
Sbjct: 53 DVTGDWTKQNIKMIFRI--EEIGGNSAYTSFLGHELTRDYMRSLVKRRTSKIDANVVVTT 110
Query: 185 TDGYVLRVFCIGFTNK 232
DG+ +RV I T K
Sbjct: 111 KDGFKVRVKPIVLTVK 126
>UniRef50_UPI00015608D3 Cluster: PREDICTED: similar to ribosomal
protein S3a; n=1; Equus caballus|Rep: PREDICTED: similar
to ribosomal protein S3a - Equus caballus
Length = 153
Score = 40.3 bits (90), Expect = 0.036
Identities = 22/40 (55%), Positives = 26/40 (65%)
Frame = +2
Query: 2 ADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTD 121
ADLQ D E +FRKF+LI E VQG+ L NF M L+ D
Sbjct: 72 ADLQND---EVAFRKFKLITEDVQGKRCLINFRSMGLSCD 108
>UniRef50_Q9YCV8 Cluster: 30S ribosomal protein S3Ae; n=12;
Archaea|Rep: 30S ribosomal protein S3Ae - Aeropyrum
pernix
Length = 214
Score = 39.9 bits (89), Expect = 0.047
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Frame = +2
Query: 68 VQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQ 247
V+G F G +L D +R + ++ + + +V T DGY LRV + FT + +
Sbjct: 70 VEGDTAYTRFKGHELLRDYIRGLTRRKSSKVTGIFNVWTKDGYGLRVTAMAFTRQRCKTS 129
Query: 248 RKSATPSTLRS--EQSERK 298
+KSA ++ EQ R+
Sbjct: 130 QKSAIRKVMQEIVEQKARE 148
Score = 37.1 bits (82), Expect = 0.33
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Frame = +1
Query: 271 TQVRAIRKKMCEIITRDVTNSELREVVNKLI----PDSIAKDIEKACHGIYPLRDVCIRK 438
+Q AIRK M EI+ + S L E++ ++ S+A I+++ IYPLR V I K
Sbjct: 129 SQKSAIRKVMQEIVEQKARESTLDELIQLMVFSDHEGSLAYLIDESARKIYPLRKVEIAK 188
Query: 439 VKVLKRP 459
K+L P
Sbjct: 189 SKLLWVP 195
>UniRef50_A7D401 Cluster: Ribosomal protein S3Ae; n=2;
Halorubrum|Rep: Ribosomal protein S3Ae - Halorubrum
lacusprofundi ATCC 49239
Length = 215
Score = 38.3 bits (85), Expect = 0.14
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Frame = +2
Query: 5 DLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKT 184
+L D+ A + F++ V F +LT D LR +V++ + +EA+I V T
Sbjct: 51 ELTGDSGANNTKLTFKITD--VGSDTAYTEFIKYELTRDYLRSLVRRGASKVEASITVLT 108
Query: 185 TDGYVLRVFCIGFTNKDS-LSQRKS 256
TD Y +RV + T K + SQ K+
Sbjct: 109 TDDYRIRVQPVALTTKKADRSQEKA 133
>UniRef50_Q6LZG0 Cluster: 30S ribosomal protein S3Ae; n=6;
Methanococcales|Rep: 30S ribosomal protein S3Ae -
Methanococcus maripaludis
Length = 225
Score = 38.3 bits (85), Expect = 0.14
Identities = 24/80 (30%), Positives = 40/80 (50%)
Frame = +2
Query: 68 VQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQ 247
V G N F G D T + L+ V++ ++ I A ++V+T DG+ +RV + T +
Sbjct: 79 VSGNNATSQFVGHDTTREYLKSQVRRRRSKINAIVEVRTKDGFKVRVKALVLTAVRARDH 138
Query: 248 RKSATPSTLRSEQSERKCVK 307
K T +R EQ ++ K
Sbjct: 139 HK--TEIRVRMEQIIKEMAK 156
>UniRef50_Q2BPA5 Cluster: Putative uncharacterized protein; n=1;
Neptuniibacter caesariensis|Rep: Putative
uncharacterized protein - Neptuniibacter caesariensis
Length = 626
Score = 37.5 bits (83), Expect = 0.25
Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = -3
Query: 390 LDVLGNGVRNQLVHHLPEFRVSDVACNDFTHFLSDCSD-LSVLGVALLRWLKESLLVKP 217
L + G R QL+HH+P+ V C F+S D LG+A RW +ES P
Sbjct: 475 LGIKGRISREQLIHHIPDLPQRTVMCCGPEGFMSHAKDYCRQLGLAEQRWFEESFGAPP 533
>UniRef50_A3H9G4 Cluster: Ribosomal protein S3Ae; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein S3Ae -
Caldivirga maquilingensis IC-167
Length = 221
Score = 37.1 bits (82), Expect = 0.33
Identities = 24/72 (33%), Positives = 34/72 (47%)
Frame = +1
Query: 247 TQECYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDV 426
T C H + IRK + + + + S+ +V I I D+ IYPLR V
Sbjct: 131 TYRCTRTHKHL--IRKSIMDRLDKVGQESDFDSLVRDSIMGKIQVDLFNVAKKIYPLRKV 188
Query: 427 CIRKVKVLKRPR 462
I K+KVL+ PR
Sbjct: 189 EIIKIKVLEYPR 200
>UniRef50_Q5V296 Cluster: 30S ribosomal protein S3Ae; n=4;
Halobacteriaceae|Rep: 30S ribosomal protein S3Ae -
Haloarcula marismortui (Halobacterium marismortui)
Length = 213
Score = 37.1 bits (82), Expect = 0.33
Identities = 23/84 (27%), Positives = 40/84 (47%)
Frame = +2
Query: 23 DAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVL 202
DA + K V + F +LT D LR +V++ + +EA I V TTD Y +
Sbjct: 55 DASENNTKLTFKINEVASDSAYTEFIRHELTRDYLRSLVRRGSSKVEAYITVLTTDDYRV 114
Query: 203 RVFCIGFTNKDSLSQRKSATPSTL 274
++ + T K + + ++ A T+
Sbjct: 115 QIQPVAVTTKKADASQEKAIRRTM 138
Score = 35.9 bits (79), Expect = 0.77
Identities = 17/66 (25%), Positives = 34/66 (51%)
Frame = +1
Query: 262 AQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKV 441
A +Q +AIR+ M +++ + ++++ ++ ++ I IYPLR V I+K
Sbjct: 126 ADASQEKAIRRTMIDLVRETAEDHTFEQLIDSVVEGRLSSAIYGEAKDIYPLRRVEIKKT 185
Query: 442 KVLKRP 459
+ RP
Sbjct: 186 TLEARP 191
>UniRef50_A4YCU2 Cluster: Ribosomal protein S3Ae; n=1;
Metallosphaera sedula DSM 5348|Rep: Ribosomal protein
S3Ae - Metallosphaera sedula DSM 5348
Length = 216
Score = 36.7 bits (81), Expect = 0.44
Identities = 16/52 (30%), Positives = 29/52 (55%)
Frame = +2
Query: 71 QGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFT 226
+G + F G +L+ D +R +V++ + I +D+ T DG+ LRV + T
Sbjct: 79 EGERLFTEFAGHELSRDYVRSLVRRKSSKINKVVDITTKDGFTLRVKTLALT 130
Score = 33.9 bits (74), Expect = 3.1
Identities = 24/79 (30%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Frame = +1
Query: 274 QVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLK 453
Q IRK M +++ + E V ++I ++A +I I PLR I K KVL
Sbjct: 138 QATTIRKIMEDVVKKTAEGKTFDEFVQEMIFGNLANNIFNEAKKIAPLRKAEIEKSKVLF 197
Query: 454 RPRFEISK-LMELHGEGGG 507
P + K +E G G
Sbjct: 198 APLIKEGKQTVESSAPGSG 216
>UniRef50_A5UKY8 Cluster: Small subunit ribosomal protein S3Ae; n=2;
Methanobacteriaceae|Rep: Small subunit ribosomal protein
S3Ae - Methanobrevibacter smithii (strain PS / ATCC
35061 / DSM 861)
Length = 193
Score = 35.9 bits (79), Expect = 0.77
Identities = 23/96 (23%), Positives = 43/96 (44%)
Frame = +2
Query: 23 DAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVL 202
D + + K R + V G F G TTD +R M+++ + I+A+ VKT D +
Sbjct: 59 DFSKQYIKLRFEIDNVAGDVANTKFTGHKTTTDYVRSMIRRGTSRIDASSVVKTKDDRKV 118
Query: 203 RVFCIGFTNKDSLSQRKSATPSTLRSEQSERKCVKS 310
++ + T + + S ++ + +E KS
Sbjct: 119 KLHVLAVTTRRAKSSQQKYMRQVINDLLAETAAEKS 154
>UniRef50_A1RXX5 Cluster: Ribosomal protein S3Ae; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein S3Ae - Thermofilum
pendens (strain Hrk 5)
Length = 207
Score = 35.9 bits (79), Expect = 0.77
Identities = 19/67 (28%), Positives = 38/67 (56%)
Frame = +1
Query: 271 TQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVL 450
+Q +AIR+ M +II+ + + + + + ++A +++ IYP++ V + K+KVL
Sbjct: 130 SQKKAIRRIMFDIISEKAASLDFDTFIQQAVIGTMATEMQMQAKKIYPIKKVEVYKIKVL 189
Query: 451 KRPRFEI 471
P EI
Sbjct: 190 -TPTTEI 195
>UniRef50_A4GI78 Cluster: Ribosomal protein S3AE; n=1; uncultured
marine bacterium HF10_29C11|Rep: Ribosomal protein S3AE
- uncultured marine bacterium HF10_29C11
Length = 322
Score = 35.5 bits (78), Expect = 1.0
Identities = 21/63 (33%), Positives = 38/63 (60%)
Frame = +2
Query: 44 KFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGF 223
+FR ++E V G++ L F G T+ +R +++++ I+ IDV T DGY++R+ +
Sbjct: 78 RFR-VSETV-GQDALTTFVGHHHQTNHIRRQIRRYRGKIDDVIDVVTEDGYLVRIKPLII 135
Query: 224 TNK 232
T K
Sbjct: 136 TQK 138
>UniRef50_Q2UC38 Cluster: Predicted protein; n=1; Aspergillus
oryzae|Rep: Predicted protein - Aspergillus oryzae
Length = 657
Score = 35.1 bits (77), Expect = 1.3
Identities = 18/60 (30%), Positives = 30/60 (50%)
Frame = -3
Query: 534 QTCLRLPPCSTAFAVKFHQLRDLETGPLQHFHLSDANIAQRVDAMAGLLDVLGNGVRNQL 355
Q C+ P C+ A +R LET P H +S +AQR++A+ L + G+ + +
Sbjct: 23 QRCVGFPTCANCNAANEPCIR-LETSPSWHHAMSKGALAQRIEALEAHLSAITEGLPSNI 81
>UniRef50_A0RTS7 Cluster: Ribosomal protein S3AE; n=2;
Thermoprotei|Rep: Ribosomal protein S3AE - Cenarchaeum
symbiosum
Length = 203
Score = 35.1 bits (77), Expect = 1.3
Identities = 20/85 (23%), Positives = 41/85 (48%)
Frame = +2
Query: 23 DAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVL 202
D +++ K + V + F + + + LR +V++ + + +DVKT+DGYV
Sbjct: 58 DPQQNNYKIYFQIDKVSEESATSIFKRYEYSKEYLRSLVRRGSSKVNYIVDVKTSDGYVF 117
Query: 203 RVFCIGFTNKDSLSQRKSATPSTLR 277
R+ + T + + +K A +R
Sbjct: 118 RLKVLALTYRHLNTSKKHALRLIIR 142
>UniRef50_Q4SVA9 Cluster: Chromosome undetermined SCAF13769, whole
genome shotgun sequence; n=3; Tetraodontidae|Rep:
Chromosome undetermined SCAF13769, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 556
Score = 34.3 bits (75), Expect = 2.3
Identities = 29/102 (28%), Positives = 49/102 (48%)
Frame = -3
Query: 315 CNDFTHFLSDCSDLSVLGVALLRWLKESLLVKPMQKTRRTYPSVVFTSMLASMRVCHFLT 136
C T + S L L +L L S+LV + + + S+L S+ +C L+
Sbjct: 342 CARHTQAHTGTSGLISLSSSLSLSLYLSVLVSLSLSSSLSLCPRLSLSVLVSLSLCLSLS 401
Query: 135 IHLSLSVVRSMPWKLQSTLRPCTYSAINLNLRKDLSASVSAC 10
+ +SLS+ S+ + +LRPC ++ ++L LS VS C
Sbjct: 402 VLVSLSLSSSLSLSVPVSLRPCLSLSVLVSL--SLSVPVSLC 441
>UniRef50_Q2W9B7 Cluster: Putative uncharacterized protein; n=3;
Magnetospirillum|Rep: Putative uncharacterized protein -
Magnetospirillum magneticum (strain AMB-1 / ATCC 700264)
Length = 282
Score = 33.9 bits (74), Expect = 3.1
Identities = 26/95 (27%), Positives = 44/95 (46%), Gaps = 1/95 (1%)
Frame = +1
Query: 253 ECYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCI 432
EC A +T + + +IT D+ N + +V + +A+D + A + PL V
Sbjct: 31 ECGALNTNLSLAPGERL-VITDDLLNGTVGDVAALSMAAIVARDSQVALAAMLPL-SVAA 88
Query: 433 RKVKVLKRPRFE-ISKLMELHGEGGGARGKPETSL 534
KV RP++E + +L+E G RG E +
Sbjct: 89 SKVSARHRPKYEQLFQLIEETAFDSGVRGSAEAMI 123
>UniRef50_Q0UV49 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 505
Score = 33.9 bits (74), Expect = 3.1
Identities = 18/41 (43%), Positives = 24/41 (58%)
Frame = -3
Query: 309 DFTHFLSDCSDLSVLGVALLRWLKESLLVKPMQKTRRTYPS 187
DF + + L+V G+ LL +L S LV P +KTRR Y S
Sbjct: 58 DFNTYYTVAEGLNVAGLVLLVFLLVSFLVLPAEKTRRHYLS 98
>UniRef50_Q6KYU3 Cluster: 30S ribosomal protein S3Ae; n=2;
Thermoplasmatales|Rep: 30S ribosomal protein S3Ae -
Picrophilus torridus
Length = 209
Score = 33.9 bits (74), Expect = 3.1
Identities = 17/57 (29%), Positives = 29/57 (50%)
Frame = +1
Query: 286 IRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKR 456
+R K+ I + L E+ +I D++ DI +YP++ + IRK +VL R
Sbjct: 137 VRSKIIGFINERCGSMTLPELAQYIIGDNVYNDIVDTLKDVYPIKKIEIRKSEVLGR 193
>UniRef50_Q6IEK0 Cluster: Putative NTPDase; n=1; Trypanosoma
brucei|Rep: Putative NTPDase - Trypanosoma brucei
Length = 603
Score = 33.5 bits (73), Expect = 4.1
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = +1
Query: 439 VKVLKRPRFEISKLMELHGEGGGARGKPETSLNGRRATS 555
+K LK R E+ K ++L EG G G+P S G+ ATS
Sbjct: 79 LKRLKEDRDELKKKLKLLEEGKGRTGEPAASCGGKDATS 117
>UniRef50_Q978Z2 Cluster: 30S ribosomal protein S3Ae; n=2;
Thermoplasma|Rep: 30S ribosomal protein S3Ae -
Thermoplasma volcanium
Length = 215
Score = 33.5 bits (73), Expect = 4.1
Identities = 23/85 (27%), Positives = 40/85 (47%)
Frame = +1
Query: 268 HTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKV 447
+T+ IRK + + I + E V LI D I D+ A IYPL+ + +RK ++
Sbjct: 132 NTKKFQIRKVLTDFILNKGLSLPYSEFVRYLIGDDIYNDMISATKDIYPLKKIEVRKSEL 191
Query: 448 LKRPRFEISKLMELHGEGGGARGKP 522
+ +S + E+H + +P
Sbjct: 192 V-----SLSGISEIHAGSQNSGEEP 211
>UniRef50_A2QIG4 Cluster: Putative uncharacterized protein; n=1;
Aspergillus niger|Rep: Putative uncharacterized protein
- Aspergillus niger
Length = 443
Score = 33.1 bits (72), Expect = 5.4
Identities = 19/52 (36%), Positives = 23/52 (44%)
Frame = +3
Query: 387 REGLPWHLPSARCLHPKGESVEEAPFRDLEVDGTSRRRRWSKGEAGDKSERP 542
R GLP HLP RCL P+ +V P + + R RW S RP
Sbjct: 168 RTGLPAHLPKTRCLSPRVAAVPIPPKKLKQGPRLVRIGRWGGWPRFSHSGRP 219
>UniRef50_Q9EST5 Cluster: Acidic leucine-rich nuclear phosphoprotein
32 family member B; n=25; Euteleostomi|Rep: Acidic
leucine-rich nuclear phosphoprotein 32 family member B -
Mus musculus (Mouse)
Length = 272
Score = 33.1 bits (72), Expect = 5.4
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = +3
Query: 441 ESVEEAPFRDLEVDGTSRRRRWSKGEAGDKSERPEGYE 554
+SVEEAP D EVDG + +GE ++ E +G E
Sbjct: 163 DSVEEAPDSDGEVDGVDKEEEDEEGEDEEEEEDEDGEE 200
>UniRef50_Q4SL53 Cluster: Chromosome 17 SCAF14563, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 17 SCAF14563, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 183
Score = 27.1 bits (57), Expect(2) = 6.6
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +1
Query: 406 IYPLRDVCIRKVKVLKRPRFEISKLMELHGEGGGARG 516
+ P+R IR V RP F + + G+GG RG
Sbjct: 102 LLPVRTSVIRSVTATSRPLFTSAPPWPVSGDGGKRRG 138
Score = 24.6 bits (51), Expect(2) = 6.6
Identities = 20/54 (37%), Positives = 22/54 (40%), Gaps = 7/54 (12%)
Frame = +1
Query: 148 ADSHRSQH*CEDNR------WIRSTCLLHWFHQ*GLL-EPTQECYAQHTQVRAI 288
+D H S ED R W S CLL +H GLL E C T R I
Sbjct: 38 SDGHDSLSQSEDPRLRILAIWSPSLCLLRCYHVPGLLVEAALACGTTRTYFRDI 91
>UniRef50_UPI0000E24310 Cluster: PREDICTED: hypothetical protein;
n=1; Pan troglodytes|Rep: PREDICTED: hypothetical
protein - Pan troglodytes
Length = 389
Score = 32.7 bits (71), Expect = 7.1
Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 6/54 (11%)
Frame = -2
Query: 523 PASPLLHRLRREVPSTSRSRN--GASSTLS----PFGCKHRAEGRCHGRPSRCP 380
PA P L R ++ +P ++R+R GA S LS P HR G C GR + P
Sbjct: 191 PAQPPLRRRQQGLPGSARARAQAGALSPLSGLAHPSAPGHRPPGPCRGRKAAAP 244
>UniRef50_Q5GT20 Cluster: Predicted protein, WF-1; n=1; Wolbachia
endosymbiont strain TRS of Brugia malayi|Rep: Predicted
protein, WF-1 - Wolbachia sp. subsp. Brugia malayi
(strain TRS)
Length = 128
Score = 32.7 bits (71), Expect = 7.1
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Frame = +1
Query: 301 CEIITRDVTNSELREVVNK---LIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFE 468
CE + D+ N ++VNK + D + DI+ I +DV I VKV+ P+ E
Sbjct: 42 CEKVKSDLKNPAYEDIVNKDTQIQEDGLVVDIDNCYFYIKYPQDVIIEVVKVINSPKVE 100
>UniRef50_Q0KDB8 Cluster: L-Amino-acid oxidase; n=3; cellular
organisms|Rep: L-Amino-acid oxidase - Ralstonia eutropha
(strain ATCC 17699 / H16 / DSM 428 / Stanier
337)(Cupriavidus necator (strain ATCC 17699 / H16 / DSM
428 / Stanier337))
Length = 434
Score = 32.7 bits (71), Expect = 7.1
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +3
Query: 105 WTSQPISSGGWL--KNGRLSSKPTLM*RQPMDTFYVSSALVSPI 230
W + P S GGW+ + G L+ LM RQP + + A ++PI
Sbjct: 363 WANDPFSKGGWMHHRPGNLTQAAPLM-RQPHGRIHFAGADIAPI 405
>UniRef50_A7RQH6 Cluster: Predicted protein; n=2; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 343
Score = 32.7 bits (71), Expect = 7.1
Identities = 30/110 (27%), Positives = 50/110 (45%), Gaps = 2/110 (1%)
Frame = -3
Query: 342 PEFRVSDVACNDFTH-FLSDCSDL-SVLGVALLRWLKESLLVKPMQKTRRTYPSVVFTSM 169
P R D C FTH + S L S+ + ++ + LVKPMQ RR V+ ++
Sbjct: 85 PAGRSGDWICKFFTHNAIMQISVLTSIFTLTIVSVERYHALVKPMQVGRRLTEDTVWYAV 144
Query: 168 LASMRVCHFLTIHLSLSVVRSMPWKLQSTLRPCTYSAINLNLRKDLSASV 19
+AS LT+ +++ K T + CT + + +++LS V
Sbjct: 145 IASWTASFILTVPSFVAI------KFDETRKACT-GPFDFHTQENLSYMV 187
>UniRef50_Q1DU10 Cluster: Predicted protein; n=1; Coccidioides
immitis|Rep: Predicted protein - Coccidioides immitis
Length = 363
Score = 32.7 bits (71), Expect = 7.1
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = +1
Query: 334 ELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLME 486
EL V + +P + AK + CH Y L D ++ +K RFE L+E
Sbjct: 60 ELLWEVTRHLPPASAKMLAYTCHKFYHLSDTWLKNIKFFPVERFETLCLLE 110
>UniRef50_UPI000155EEEB Cluster: PREDICTED: similar to leukocyte
immunoglobulin-like receptor; n=2; Laurasiatheria|Rep:
PREDICTED: similar to leukocyte immunoglobulin-like
receptor - Equus caballus
Length = 618
Score = 32.3 bits (70), Expect = 9.4
Identities = 15/42 (35%), Positives = 18/42 (42%)
Frame = -2
Query: 484 PSTSRSRNGASSTLSPFGCKHRAEGRCHGRPSRCPWQWSQES 359
P R A + P H RC+G PS P+ WSQ S
Sbjct: 175 PRIHHGRWQALFPVGPVNTSHGGTYRCYGSPSSYPYAWSQPS 216
>UniRef50_A1ZNL6 Cluster: PKD domain protein; n=1; Microscilla marina
ATCC 23134|Rep: PKD domain protein - Microscilla marina
ATCC 23134
Length = 8871
Score = 32.3 bits (70), Expect = 9.4
Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Frame = +2
Query: 224 TNKDSLSQRKSATPSTLRSEQSERKCVK--SLHATSLTLNSGRW 349
++ S+S K ATPST + ++ CV +L ATS T+ +G W
Sbjct: 8469 SSSSSISVTKEATPSTANAGTNQVVCVNTATLTATSPTVGTGMW 8512
>UniRef50_Q01HQ6 Cluster: OSIGBa0153E02-OSIGBa0093I20.19 protein;
n=42; Oryza sativa|Rep: OSIGBa0153E02-OSIGBa0093I20.19
protein - Oryza sativa (Rice)
Length = 1752
Score = 32.3 bits (70), Expect = 9.4
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Frame = +3
Query: 60 PNMCK-DVMCSATSTAWTSQPISSGGWLKNGRL--SSKPTLM*RQPMDTFYVSSALVSPI 230
P CK + WTS P+++ GW NGR+ + PTL Q + ++ A VS +
Sbjct: 1631 PGKCKLHAWLIIQNRVWTSDPLATRGWQNNGRVPPARTPTLGVAQSVKDWWEMLASVSGV 1690
>UniRef50_Q4Q8H6 Cluster:
Endonuclease/exonuclease/phosphatase-likeprotei n; n=3;
Leishmania|Rep:
Endonuclease/exonuclease/phosphatase-likeprotei n -
Leishmania major
Length = 1471
Score = 32.3 bits (70), Expect = 9.4
Identities = 18/63 (28%), Positives = 31/63 (49%)
Frame = -2
Query: 529 LSPASPLLHRLRREVPSTSRSRNGASSTLSPFGCKHRAEGRCHGRPSRCPWQWSQESTCS 350
++PASP R RR P+ + SR+GA + SP +H + S + ++ + +
Sbjct: 1299 VTPASPRARRKRR--PAVAASRDGAPTPASPQATRHFSSQAAPQSSSAADYDFACSTVST 1356
Query: 349 PPP 341
PP
Sbjct: 1357 SPP 1359
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 615,443,725
Number of Sequences: 1657284
Number of extensions: 13010162
Number of successful extensions: 44101
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 42315
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44082
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 44392209541
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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