Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30687
         (614 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X98186-1|CAA66861.1|  269|Anopheles gambiae put. S3a ribosomal p...   141   2e-35
AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking p...    27   0.48 
EF519382-1|ABP68491.1|  493|Anopheles gambiae LRIM1 protein.           24   3.4  
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    24   4.5  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    23   5.9  
AY344814-1|AAR03842.1|  286|Anopheles gambiae LRR Toll protein.        23   7.8  

>X98186-1|CAA66861.1|  269|Anopheles gambiae put. S3a ribosomal
           protein homologue protein.
          Length = 269

 Score =  141 bits (341), Expect = 2e-35
 Identities = 70/113 (61%), Positives = 87/113 (76%), Gaps = 2/113 (1%)
 Frame = +2

Query: 2   ADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVK 181
           ADLQ + DAERSFRKF+L+AE V GR+VL NFHGM LTTDKLR MV KWQTLIE ++DVK
Sbjct: 72  ADLQNEPDAERSFRKFKLVAESVNGRDVLTNFHGMALTTDKLRSMVNKWQTLIECSVDVK 131

Query: 182 TTDGYVLRVFCIGFTNKDSLSQRKS--ATPSTLRSEQSERKCVKSLHATSLTL 334
           TTDG++LRVFCIGFT KDS+SQRK+  A  S +++ +++   +     TS  L
Sbjct: 132 TTDGFMLRVFCIGFTIKDSMSQRKTCYAQHSQIKNIRAKMTAIIKREITSTDL 184



 Score =  130 bits (314), Expect = 3e-32
 Identities = 58/91 (63%), Positives = 74/91 (81%)
 Frame = +1

Query: 256 CYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIR 435
           CYAQH+Q++ IR KM  II R++T+++L+ VV KL+PDSIAKDIEKAC  +YPL DV IR
Sbjct: 157 CYAQHSQIKNIRAKMTAIIKREITSTDLKGVVEKLLPDSIAKDIEKACQVVYPLHDVYIR 216

Query: 436 KVKVLKRPRFEISKLMELHGEGGGARGKPET 528
           KVKVLK+PRF++S LMELHG+GGG   +  T
Sbjct: 217 KVKVLKKPRFDLSSLMELHGDGGGKAAEVST 247



 Score = 33.5 bits (73), Expect = 0.006
 Identities = 19/37 (51%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
 Frame = +3

Query: 468 DLEVDGTSRRRRWSKGEA-GDKSERPEGYEPPVQESV 575
           +L  DG  +    S G A G    RPEGYEPPVQ SV
Sbjct: 233 ELHGDGGGKAAEVSTGAASGVVVVRPEGYEPPVQASV 269


>AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking
           protein.
          Length = 932

 Score = 27.1 bits (57), Expect = 0.48
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +3

Query: 408 LPSARCLHPKGESVEEAPFRDLEVDGTS 491
           +P   C H  G ++E+A    LE DGT+
Sbjct: 557 MPPKGCSHDDGPALEKAQLYQLESDGTA 584


>EF519382-1|ABP68491.1|  493|Anopheles gambiae LRIM1 protein.
          Length = 493

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 15/52 (28%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
 Frame = +2

Query: 2   ADLQADTDA-ERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQT 154
           A+L A +D  E    ++  I + +QG+ V      +DL+++KL +M  ++Q+
Sbjct: 184 AELAASSDTLEHLNLQYNFIYD-IQGQVVFAKLKTLDLSSNKLAFMGPEFQS 234


>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1009

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 10/29 (34%), Positives = 19/29 (65%)
 Frame = -3

Query: 438 LSDANIAQRVDAMAGLLDVLGNGVRNQLV 352
           L+ AN  QR++    L D++G+  RN+++
Sbjct: 560 LAIANALQRINTPKYLYDIIGDYFRNRVL 588


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 23.4 bits (48), Expect = 5.9
 Identities = 12/39 (30%), Positives = 15/39 (38%)
 Frame = -2

Query: 463 NGASSTLSPFGCKHRAEGRCHGRPSRCPWQWSQESTCSP 347
           NG    +   G  H   G    RPSR    ++  S C P
Sbjct: 146 NGLGLEVLNIGTSHTFRGCGSARPSRIDVAFASPSICRP 184


>AY344814-1|AAR03842.1|  286|Anopheles gambiae LRR Toll protein.
          Length = 286

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 14/52 (26%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
 Frame = +2

Query: 2   ADLQADTDA-ERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQT 154
           A+L A +D  E    ++  + + +QG+ V      +DL+++KL +M  ++Q+
Sbjct: 109 AELAASSDTLEHLNLQYNFMYD-IQGQVVFAKLKTLDLSSNKLAFMGPEFQS 159


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 649,284
Number of Sequences: 2352
Number of extensions: 13784
Number of successful extensions: 43
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 60132501
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)