Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30687
(614 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 23 3.1
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 23 3.1
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 22 4.1
AB086196-1|BAD06465.1| 289|Apis mellifera Period protein. 22 4.1
X16709-1|CAA34681.1| 162|Apis mellifera phospholipase A-2 protein. 21 7.2
EF373554-1|ABQ28728.1| 167|Apis mellifera phospholipase A2 prot... 21 7.2
AF438408-1|AAL30844.1| 167|Apis mellifera phospholipase A2 prot... 21 7.2
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 21 7.2
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 21 7.2
AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase ... 21 7.2
DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein pr... 21 9.6
AY661557-1|AAT74557.1| 411|Apis mellifera yellow-f-like protein... 21 9.6
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 21 9.6
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 21 9.6
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 22.6 bits (46), Expect = 3.1
Identities = 12/42 (28%), Positives = 20/42 (47%)
Frame = -3
Query: 291 SDCSDLSVLGVALLRWLKESLLVKPMQKTRRTYPSVVFTSML 166
++C DLSV G A + +K +L P + P + S +
Sbjct: 448 TECEDLSVSGEAGIEEVKSPVLRSPPAFSHSRCPPEIHKSCI 489
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 22.6 bits (46), Expect = 3.1
Identities = 12/42 (28%), Positives = 20/42 (47%)
Frame = -3
Query: 291 SDCSDLSVLGVALLRWLKESLLVKPMQKTRRTYPSVVFTSML 166
++C DLSV G A + +K +L P + P + S +
Sbjct: 448 TECEDLSVSGEAGIEEVKSPVLRSPPAFSHSRCPPEIHKSCI 489
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 22.2 bits (45), Expect = 4.1
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = -2
Query: 481 STSRSRNGASSTLSPFGCKHRAEGRCHGRPS 389
S S+S+ + S++S + + G C RPS
Sbjct: 22 SNSQSQRSSGSSISRNSNRSESSGYCGRRPS 52
>AB086196-1|BAD06465.1| 289|Apis mellifera Period protein.
Length = 289
Score = 22.2 bits (45), Expect = 4.1
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = -2
Query: 481 STSRSRNGASSTLSPFGCKHRAEGRCHGRPS 389
S S+S+ + S++S + + G C RPS
Sbjct: 22 SNSQSQRSSGSSISRNSNRSESSGYCGRRPS 52
>X16709-1|CAA34681.1| 162|Apis mellifera phospholipase A-2 protein.
Length = 162
Score = 21.4 bits (43), Expect = 7.2
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = -2
Query: 433 GCKHRAEGRC 404
GC R EGRC
Sbjct: 132 GCGERTEGRC 141
>EF373554-1|ABQ28728.1| 167|Apis mellifera phospholipase A2
protein.
Length = 167
Score = 21.4 bits (43), Expect = 7.2
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = -2
Query: 433 GCKHRAEGRC 404
GC R EGRC
Sbjct: 137 GCGERTEGRC 146
>AF438408-1|AAL30844.1| 167|Apis mellifera phospholipase A2
protein.
Length = 167
Score = 21.4 bits (43), Expect = 7.2
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = -2
Query: 433 GCKHRAEGRC 404
GC R EGRC
Sbjct: 137 GCGERTEGRC 146
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 21.4 bits (43), Expect = 7.2
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +2
Query: 245 QRKSATPSTLRSEQSE 292
QRK TP + S++SE
Sbjct: 1771 QRKQQTPGDVESDESE 1786
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 21.4 bits (43), Expect = 7.2
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +2
Query: 245 QRKSATPSTLRSEQSE 292
QRK TP + S++SE
Sbjct: 1767 QRKQQTPGDVESDESE 1782
>AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase
protein.
Length = 628
Score = 21.4 bits (43), Expect = 7.2
Identities = 15/30 (50%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = -1
Query: 395 AFSMSLAMES-GINLFTTSLSSELVTSRVM 309
A S+S E G +L T+LSS LV SRV+
Sbjct: 599 ASSVSAGEEGLGNSLAITALSSILVLSRVI 628
>DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein
protein.
Length = 484
Score = 21.0 bits (42), Expect = 9.6
Identities = 11/50 (22%), Positives = 22/50 (44%)
Frame = +1
Query: 178 EDNRWIRSTCLLHWFHQ*GLLEPTQECYAQHTQVRAIRKKMCEIITRDVT 327
ED+ WI + + + Q G C + +V + K + +I+ +T
Sbjct: 29 EDSNWIITNSFIIFTMQTGFGMLESGCVSLKNEVNIMMKNVVDIVLGGLT 78
>AY661557-1|AAT74557.1| 411|Apis mellifera yellow-f-like protein
protein.
Length = 411
Score = 21.0 bits (42), Expect = 9.6
Identities = 8/38 (21%), Positives = 22/38 (57%)
Frame = +2
Query: 62 EYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANID 175
+Y++ N+ +GM + DK+ + +W+ + +N++
Sbjct: 45 DYIEENNMP---NGMQIWNDKVFITIPRWKNGVPSNLN 79
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 21.0 bits (42), Expect = 9.6
Identities = 8/28 (28%), Positives = 16/28 (57%)
Frame = +2
Query: 215 IGFTNKDSLSQRKSATPSTLRSEQSERK 298
+G+TNK S ++ A+P ++ +K
Sbjct: 98 LGYTNKMSTRGKRPASPGYVQPPTKHQK 125
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.0 bits (42), Expect = 9.6
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = -1
Query: 191 HRLSSHQCWLR*ES 150
H LS H+C++R E+
Sbjct: 554 HNLSLHKCFMRVEN 567
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,743
Number of Sequences: 438
Number of extensions: 3485
Number of successful extensions: 16
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18215697
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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