Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30686
(594 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q07020 Cluster: 60S ribosomal protein L18; n=124; Eukar... 138 1e-31
UniRef50_O65729 Cluster: 60S ribosomal protein L18; n=17; Eukary... 107 1e-22
UniRef50_P07279 Cluster: 60S ribosomal protein L18; n=5; Dikarya... 82 8e-15
UniRef50_Q4QG98 Cluster: 60S ribosomal protein L18; n=8; Trypano... 78 2e-13
UniRef50_Q7RPR6 Cluster: Eukaryotic ribosomal protein L18, putat... 75 2e-12
UniRef50_UPI000155D3ED Cluster: PREDICTED: similar to ribosomal ... 74 3e-12
UniRef50_UPI0000498BAB Cluster: 60S ribosomal protein L18; n=1; ... 68 2e-10
UniRef50_UPI0000E4A07F Cluster: PREDICTED: similar to ribosomal ... 66 6e-10
UniRef50_Q7QQK8 Cluster: Ribosomal protein L18; n=1; Giardia lam... 66 8e-10
UniRef50_A0ED68 Cluster: Chromosome undetermined scaffold_9, who... 65 1e-09
UniRef50_A0BXY7 Cluster: Chromosome undetermined scaffold_135, w... 64 2e-09
UniRef50_Q4N438 Cluster: 60S ribosomal protein L18; n=8; Eukaryo... 62 1e-08
UniRef50_A4D0W6 Cluster: Similar to ribosomal protein L18; 60S r... 62 1e-08
UniRef50_UPI000050E205 Cluster: 60S ribosomal subunit protein L1... 57 4e-07
UniRef50_UPI0000F2DC1A Cluster: PREDICTED: similar to ribosomal ... 54 2e-06
UniRef50_A7Q837 Cluster: Chromosome undetermined scaffold_62, wh... 51 2e-05
UniRef50_A5BN99 Cluster: Putative uncharacterized protein; n=1; ... 51 2e-05
UniRef50_Q580C7 Cluster: Putative uncharacterized protein; n=1; ... 36 0.72
UniRef50_Q06035 Cluster: Gag,protease,endonuclease, reverse tran... 33 3.8
UniRef50_Q6UUI0 Cluster: Putative uncharacterized protein; n=1; ... 33 5.0
UniRef50_Q8ZYQ2 Cluster: 50S ribosomal protein L18e; n=7; Thermo... 33 6.7
UniRef50_Q0SUG4 Cluster: CRISPR-associated protein Csx8, putativ... 32 8.8
UniRef50_Q98RU3 Cluster: 60s ribosomal protein L18; n=1; Guillar... 32 8.8
UniRef50_Q6CXL9 Cluster: Similarity; n=1; Kluyveromyces lactis|R... 32 8.8
UniRef50_A1DA31 Cluster: Putative uncharacterized protein; n=1; ... 32 8.8
>UniRef50_Q07020 Cluster: 60S ribosomal protein L18; n=124;
Eukaryota|Rep: 60S ribosomal protein L18 - Homo sapiens
(Human)
Length = 188
Score = 138 bits (333), Expect = 1e-31
Identities = 77/172 (44%), Positives = 90/172 (52%)
Frame = +2
Query: 2 GIDINHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPI 181
G+DI H DRKVRR E KSQDI TN+ FNQ+VL+RLFMSR NRPP+
Sbjct: 2 GVDIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPPL 61
Query: 182 SVSRLARHMKKPTREGLIAVVVGTAQMT*DCTRYRR*RWLLFMLPKKLVHAFWLLEEKFL 361
S+SR+ R MK P RE AVVVGT + + + + K L
Sbjct: 62 SLSRMIRKMKLPGRENKTAVVVGTITDDVRVQEVPKLKVCALRVTSRARSRILRAGGKIL 121
Query: 362 LLISWLFVPPTGKKTVLVQGQRNAREAVRHFGPAPGAPRSHTKPYVRTKDMK 517
P G TVL+ G R RE RHFG APG P SHTKPYVR+K K
Sbjct: 122 TFDQLALDSPKGCGTVLLSGPRKGREVYRHFGKAPGTPHSHTKPYVRSKGRK 173
Score = 62.5 bits (145), Expect = 7e-09
Identities = 29/45 (64%), Positives = 37/45 (82%)
Frame = +1
Query: 247 GDSTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLAL 381
G T+DVR+ ++PK+ V AL VT +AR+RIL AGG+ILTFDQLAL
Sbjct: 84 GTITDDVRVQEVPKLKVCALRVTSRARSRILRAGGKILTFDQLAL 128
>UniRef50_O65729 Cluster: 60S ribosomal protein L18; n=17;
Eukaryota|Rep: 60S ribosomal protein L18 - Cicer
arietinum (Chickpea) (Garbanzo)
Length = 183
Score = 107 bits (258), Expect = 1e-22
Identities = 67/165 (40%), Positives = 92/165 (55%), Gaps = 1/165 (0%)
Frame = +2
Query: 26 DRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPISVSRLARH 205
++K +RT KS DI T++ FN ++L+RLFMS++NRPP+S+SRL ++
Sbjct: 8 NKKTKRTSPKSNDIYLKLLVKLYRFLVRRTDSNFNAVILKRLFMSKVNRPPLSLSRLIKY 67
Query: 206 MKKPTREGLIAVVVGTAQMT*DCTRYRR*RWLLFMLP-KKLVHAFWLLEEKFLLLISWLF 382
M+ +EG I VVVG +T D Y + L + A L L
Sbjct: 68 MQG--KEGKIGVVVGA--VTDDIRVYDVPTIKVTALKFTETARARIQKAGGECLTFDQLA 123
Query: 383 VPPTGKKTVLVQGQRNAREAVRHFGPAPGAPRSHTKPYVRTKDMK 517
+ TVL++G +NAREAV+HFGPAPG P SHTKPYVR+K K
Sbjct: 124 LRLPLTDTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRK 168
Score = 60.1 bits (139), Expect = 4e-08
Identities = 29/46 (63%), Positives = 34/46 (73%)
Frame = +1
Query: 247 GDSTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALR 384
G T+D+R+Y +P + V AL TE ARARI AGGE LTFDQLALR
Sbjct: 80 GAVTDDIRVYDVPTIKVTALKFTETARARIQKAGGECLTFDQLALR 125
>UniRef50_P07279 Cluster: 60S ribosomal protein L18; n=5;
Dikarya|Rep: 60S ribosomal protein L18 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 186
Score = 82.2 bits (194), Expect = 8e-15
Identities = 55/158 (34%), Positives = 82/158 (51%), Gaps = 3/158 (1%)
Frame = +2
Query: 2 GIDINHK-HDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPP 178
GID K H R RT KS ++ T+A FN++VL+ LF+S+INRPP
Sbjct: 2 GIDHTSKQHKRSGHRTAPKSDNVYLKLLVKLYTFLARRTDAPFNKVVLKALFLSKINRPP 61
Query: 179 ISVSRLARHMKKPTREGLIAVVVGTAQMT*DCTRYRR*RWLLFMLPKKLVHAFWLLEE-- 352
+SVSR+AR +K+ VVVGT +T D + + + L +++
Sbjct: 62 VSVSRIARALKQEGAANKTVVVVGT--VTDDARIFEFPKTTVAALRFTAGARAKIVKAGG 119
Query: 353 KFLLLISWLFVPPTGKKTVLVQGQRNAREAVRHFGPAP 466
+ + L P G+ T++++G RN+REAVRHFG P
Sbjct: 120 ECITLDQLAVRAPKGQNTLILRGPRNSREAVRHFGMGP 157
Score = 58.4 bits (135), Expect = 1e-07
Identities = 28/51 (54%), Positives = 36/51 (70%)
Frame = +1
Query: 247 GDSTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRASDWQ 399
G T+D R+++ PK TVAAL T ARA+I+ AGGE +T DQLA+RA Q
Sbjct: 85 GTVTDDARIFEFPKTTVAALRFTAGARAKIVKAGGECITLDQLAVRAPKGQ 135
>UniRef50_Q4QG98 Cluster: 60S ribosomal protein L18; n=8;
Trypanosomatidae|Rep: 60S ribosomal protein L18 -
Leishmania major
Length = 198
Score = 77.8 bits (183), Expect = 2e-13
Identities = 53/144 (36%), Positives = 75/144 (52%), Gaps = 8/144 (5%)
Frame = +2
Query: 113 TNAKFNQIVLRRLFMSRINRPPISVSRLARHMKK------PTREGLIAVVVGTAQMT*DC 274
T++ FN++V +RL SR NR PIS+SR+A MK+ ++ IAVVVG
Sbjct: 40 TSSGFNKVVYQRLIKSRSNRAPISLSRIAVVMKRKAVFTAKSKAAPIAVVVGDVLDDVRM 99
Query: 275 TRYRR*RWLLFMLPKKLVHAFWLLEEKFLLLISWLFVPPTGKKTVLVQGQRNAREAVRHF 454
R R K + + L + PTGK T L++G+++ RE+VRHF
Sbjct: 100 ARIPAMRVCALRFSKSARQSIVAAGGECLTFDQLAMIAPTGKNTYLLRGRKSGRESVRHF 159
Query: 455 GPAPGAPRSHTKPYV--RTKDMKK 520
G A G P SH+KPY R K+ K+
Sbjct: 160 G-ASGVPGSHSKPYATNRGKETKR 182
Score = 55.2 bits (127), Expect = 1e-06
Identities = 27/47 (57%), Positives = 34/47 (72%)
Frame = +1
Query: 247 GDSTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRA 387
GD +DVR+ +IP M V AL ++ AR I+AAGGE LTFDQLA+ A
Sbjct: 91 GDVLDDVRMARIPAMRVCALRFSKSARQSIVAAGGECLTFDQLAMIA 137
>UniRef50_Q7RPR6 Cluster: Eukaryotic ribosomal protein L18,
putative; n=4; Plasmodium (Vinckeia)|Rep: Eukaryotic
ribosomal protein L18, putative - Plasmodium yoelii
yoelii
Length = 243
Score = 74.5 bits (175), Expect = 2e-12
Identities = 45/135 (33%), Positives = 67/135 (49%)
Frame = +2
Query: 113 TNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVGTAQMT*DCTRYRR* 292
T+ FN+I+ +RL M + RPP+S+S+L +HM + +AVVVG+ R
Sbjct: 96 TDVNFNKIIAKRLIMPKRFRPPLSLSKLQQHMSN--NQNSVAVVVGSITDDKRLFSCRNM 153
Query: 293 RWLLFMLPKKLVHAFWLLEEKFLLLISWLFVPPTGKKTVLVQGQRNAREAVRHFGPAPGA 472
+ + + L PTGK +L++G AR A +HFG APG
Sbjct: 154 KVCALRFTETARKRIVDAGGECLTFDQLALRYPTGKDCILLRGPTKARTAEKHFGSAPGR 213
Query: 473 PRSHTKPYVRTKDMK 517
P+S +PYVR+K K
Sbjct: 214 PKSKARPYVRSKGRK 228
Score = 54.8 bits (126), Expect = 1e-06
Identities = 28/46 (60%), Positives = 31/46 (67%)
Frame = +1
Query: 247 GDSTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALR 384
G T+D RL+ M V AL TE AR RI+ AGGE LTFDQLALR
Sbjct: 139 GSITDDKRLFSCRNMKVCALRFTETARKRIVDAGGECLTFDQLALR 184
>UniRef50_UPI000155D3ED Cluster: PREDICTED: similar to ribosomal
protein L18; n=1; Ornithorhynchus anatinus|Rep:
PREDICTED: similar to ribosomal protein L18 -
Ornithorhynchus anatinus
Length = 188
Score = 73.7 bits (173), Expect = 3e-12
Identities = 34/65 (52%), Positives = 43/65 (66%)
Frame = +2
Query: 2 GIDINHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPI 181
G+DI H DRKVRR E KSQDI TN+ FN++VL+RLFMSR NRPP+
Sbjct: 111 GVDIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSSFNKVVLKRLFMSRTNRPPL 170
Query: 182 SVSRL 196
++SR+
Sbjct: 171 ALSRM 175
>UniRef50_UPI0000498BAB Cluster: 60S ribosomal protein L18; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L18 - Entamoeba histolytica HM-1:IMSS
Length = 168
Score = 67.7 bits (158), Expect = 2e-10
Identities = 53/153 (34%), Positives = 74/153 (48%), Gaps = 2/153 (1%)
Frame = +2
Query: 5 IDINHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPIS 184
ID++ H RK + + T +KF + +L RL +SR+NRP +S
Sbjct: 3 IDLDRHHVRKHVSKTARGNNAYMKLLVRLYGFLARRTQSKFAKTILHRLCLSRVNRPIVS 62
Query: 185 VSRLARHMKKPTREGLIAVVVGTAQMT*DCTRYRR*RWLLFMLP--KKLVHAFWLLEEKF 358
S+LA MKK E AV V T +T D +RY + + L K A K
Sbjct: 63 TSKLACLMKKHPEE--TAVCVNT--VTYD-SRYPVPKMNVCALKFTKTAEAAITKAGGKC 117
Query: 359 LLLISWLFVPPTGKKTVLVQGQRNAREAVRHFG 457
L PTG+KTVL++G+RN REA++HFG
Sbjct: 118 LRFDELALKAPTGRKTVLIRGKRNVREALKHFG 150
Score = 45.2 bits (102), Expect = 0.001
Identities = 24/44 (54%), Positives = 29/44 (65%)
Frame = +1
Query: 256 TNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRA 387
T D R Y +PKM V AL T+ A A I AGG+ L FD+LAL+A
Sbjct: 85 TYDSR-YPVPKMNVCALKFTKTAEAAITKAGGKCLRFDELALKA 127
>UniRef50_UPI0000E4A07F Cluster: PREDICTED: similar to ribosomal
protein L18, partial; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to ribosomal protein
L18, partial - Strongylocentrotus purpuratus
Length = 354
Score = 66.1 bits (154), Expect = 6e-10
Identities = 30/51 (58%), Positives = 41/51 (80%)
Frame = +1
Query: 247 GDSTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRASDWQ 399
G T+DVR++K+PK+ + AL VT +ARARI+ AGGEI+TFDQLAL++ Q
Sbjct: 54 GCITDDVRIHKLPKLKICALRVTARARARIIKAGGEIITFDQLALQSPKGQ 104
Score = 59.7 bits (138), Expect = 5e-08
Identities = 29/46 (63%), Positives = 35/46 (76%)
Frame = +2
Query: 113 TNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVG 250
TNAKFN IVL+RLFMSR N+ +S++R+ R M K REG AVVVG
Sbjct: 9 TNAKFNNIVLKRLFMSRSNKAAMSLARVVRFMNKDGREGKTAVVVG 54
>UniRef50_Q7QQK8 Cluster: Ribosomal protein L18; n=1; Giardia
lamblia ATCC 50803|Rep: Ribosomal protein L18 - Giardia
lamblia ATCC 50803
Length = 179
Score = 65.7 bits (153), Expect = 8e-10
Identities = 59/168 (35%), Positives = 79/168 (47%), Gaps = 4/168 (2%)
Frame = +2
Query: 2 GIDINHK-HDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPP 178
GID+ RKV R E KS + T F +++ +RL +S+ NRP
Sbjct: 2 GIDLKTGIKKRKVERKEPKSPNPYIRLLHNAFKVVYENTGEDFTKVLTKRLCLSKTNRPV 61
Query: 179 ISVSRLARHMKKPTREGLIAVVVGTAQMT*DCTRYRR*RWLLFMLPKKLVHAFWLLEE-- 352
+SVSRLA M K RE IAVV T +T D R + L K A +E+
Sbjct: 62 LSVSRLAHLMHK--REDKIAVVAST--VTNDERLVTIPRMTICAL-KFSATARSRIEKAG 116
Query: 353 -KFLLLISWLFVPPTGKKTVLVQGQRNAREAVRHFGPAPGAPRSHTKP 493
+ + L PTG VL+QG+R+ R + FG +PG P SH KP
Sbjct: 117 GRCMSFDELLAEKPTGDNCVLLQGRRSCRAVCKKFG-SPGRPNSHVKP 163
Score = 46.0 bits (104), Expect = 7e-04
Identities = 21/40 (52%), Positives = 28/40 (70%)
Frame = +1
Query: 256 TNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQL 375
TND RL IP+MT+ AL + AR+RI AGG ++FD+L
Sbjct: 86 TNDERLVTIPRMTICALKFSATARSRIEKAGGRCMSFDEL 125
>UniRef50_A0ED68 Cluster: Chromosome undetermined scaffold_9, whole
genome shotgun sequence; n=6; Eukaryota|Rep: Chromosome
undetermined scaffold_9, whole genome shotgun sequence -
Paramecium tetraurelia
Length = 469
Score = 64.9 bits (151), Expect = 1e-09
Identities = 47/129 (36%), Positives = 63/129 (48%)
Frame = +2
Query: 113 TNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVGTAQMT*DCTRYRR* 292
T++ FN VLRRL +R R PISVSRL + + + VVVGT +
Sbjct: 335 TDSNFNATVLRRLQQTRTARYPISVSRLVKQINTAKDKTRTLVVVGTVTDDVRLLTVPKI 394
Query: 293 RWLLFMLPKKLVHAFWLLEEKFLLLISWLFVPPTGKKTVLVQGQRNAREAVRHFGPAPGA 472
+ K+++ A K L PTG T+L++G R RE ++HFG A G
Sbjct: 395 KVFTETARKRILAA----GGKTLTFDQLAQQNPTGTGTILLRGPR-VREELKHFGRAAGL 449
Query: 473 PRSHTKPYV 499
P SH KPYV
Sbjct: 450 PGSHAKPYV 458
Score = 49.6 bits (113), Expect = 5e-05
Identities = 31/57 (54%), Positives = 37/57 (64%)
Frame = +1
Query: 247 GDSTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRASDWQEDSTGT 417
G T+DVRL +PK+ V TE AR RILAAGG+ LTFDQLA Q++ TGT
Sbjct: 380 GTVTDDVRLLTVPKIKV----FTETARKRILAAGGKTLTFDQLA------QQNPTGT 426
>UniRef50_A0BXY7 Cluster: Chromosome undetermined scaffold_135,
whole genome shotgun sequence; n=3; Eukaryota|Rep:
Chromosome undetermined scaffold_135, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 393
Score = 64.5 bits (150), Expect = 2e-09
Identities = 45/129 (34%), Positives = 60/129 (46%)
Frame = +2
Query: 113 TNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVGTAQMT*DCTRYRR* 292
T+++FN VLRRL +R R PISVSRL + + + VVVGT +
Sbjct: 255 TDSQFNATVLRRLQSTRTARYPISVSRLVKQINTAKDKTRTLVVVGTVTDDARLLTVPKL 314
Query: 293 RWLLFMLPKKLVHAFWLLEEKFLLLISWLFVPPTGKKTVLVQGQRNAREAVRHFGPAPGA 472
+ K L PTG T+L++G + REA++HFG A G
Sbjct: 315 NVCALRFTETARKRILAAGGKTLTFDQLAQQNPTGTGTILLRGPK-VREALKHFGRAAGL 373
Query: 473 PRSHTKPYV 499
P SH KPYV
Sbjct: 374 PGSHAKPYV 382
Score = 58.8 bits (136), Expect = 9e-08
Identities = 32/57 (56%), Positives = 38/57 (66%)
Frame = +1
Query: 247 GDSTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRASDWQEDSTGT 417
G T+D RL +PK+ V AL TE AR RILAAGG+ LTFDQLA Q++ TGT
Sbjct: 300 GTVTDDARLLTVPKLNVCALRFTETARKRILAAGGKTLTFDQLA------QQNPTGT 350
>UniRef50_Q4N438 Cluster: 60S ribosomal protein L18; n=8;
Eukaryota|Rep: 60S ribosomal protein L18 - Theileria
parva
Length = 184
Score = 62.1 bits (144), Expect = 1e-08
Identities = 29/47 (61%), Positives = 36/47 (76%)
Frame = +1
Query: 247 GDSTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRA 387
G TND R+ +PK++V AL VTE AR RILA+GGE+LTFDQL R+
Sbjct: 83 GTVTNDERMDVVPKLSVCALRVTETARKRILASGGEVLTFDQLVARS 129
Score = 60.1 bits (139), Expect = 4e-08
Identities = 43/135 (31%), Positives = 66/135 (48%)
Frame = +2
Query: 113 TNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVGTAQMT*DCTRYRR* 292
T+ FN++VL+RL M R + P+S+S+L++HM+K R AVVVGT +
Sbjct: 40 TDHSFNKVVLKRLLMPRRFKAPLSLSKLSKHMEK--RPDNTAVVVGTVTNDERMDVVPKL 97
Query: 293 RWLLFMLPKKLVHAFWLLEEKFLLLISWLFVPPTGKKTVLVQGQRNAREAVRHFGPAPGA 472
+ + + L + PTG + L++G AREAV+HF
Sbjct: 98 SVCALRVTETARKRILASGGEVLTFDQLVARSPTGSRCTLLRGATKAREAVKHF---RNE 154
Query: 473 PRSHTKPYVRTKDMK 517
+ + KPYVR+K K
Sbjct: 155 VKGNPKPYVRSKGRK 169
>UniRef50_A4D0W6 Cluster: Similar to ribosomal protein L18; 60S
ribosomal protein L18; n=2; Homo sapiens|Rep: Similar to
ribosomal protein L18; 60S ribosomal protein L18 - Homo
sapiens (Human)
Length = 224
Score = 61.7 bits (143), Expect = 1e-08
Identities = 41/117 (35%), Positives = 53/117 (45%)
Frame = +2
Query: 167 NRPPISVSRLARHMKKPTREGLIAVVVGTAQMT*DCTRYRR*RWLLFMLPKKLVHAFWLL 346
N+PP+S+SR+ MK P +E AVVVGT + + + + +
Sbjct: 93 NQPPLSLSRMIPKMKLPGQENKTAVVVGTITDDVWVQEVPKLKVCALGVTSRARSHIVRV 152
Query: 347 EEKFLLLISWLFVPPTGKKTVLVQGQRNAREAVRHFGPAPGAPRSHTKPYVRTKDMK 517
K L P TVL+ G R RE HF A G P SHTKPYVR+K K
Sbjct: 153 GGKNLTFDQLALDSPKVCSTVLLSGPRKGREVYWHFDKALGTPHSHTKPYVRSKGRK 209
Score = 50.8 bits (116), Expect = 2e-05
Identities = 24/45 (53%), Positives = 33/45 (73%)
Frame = +1
Query: 247 GDSTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLAL 381
G T+DV + ++PK+ V AL VT +AR+ I+ GG+ LTFDQLAL
Sbjct: 120 GTITDDVWVQEVPKLKVCALGVTSRARSHIVRVGGKNLTFDQLAL 164
>UniRef50_UPI000050E205 Cluster: 60S ribosomal subunit protein L18;
n=1; Theileria annulata strain Ankara|Rep: 60S ribosomal
subunit protein L18 - Theileria annulata strain Ankara
Length = 222
Score = 56.8 bits (131), Expect = 4e-07
Identities = 26/43 (60%), Positives = 34/43 (79%)
Frame = +1
Query: 259 NDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRA 387
+D R+ +PK++V AL VTE AR RILA+GGE+LTFDQL R+
Sbjct: 125 DDERMDVVPKLSVCALRVTETARKRILASGGEVLTFDQLVARS 167
Score = 45.2 bits (102), Expect = 0.001
Identities = 23/51 (45%), Positives = 35/51 (68%)
Frame = +2
Query: 113 TNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVGTAQMT 265
T+ FN+IVL+RL M R + P+S+S+L++HM+ +R AVV+GT T
Sbjct: 40 TDFPFNKIVLKRLLMPRRYKAPLSLSKLSKHME--SRPNNTAVVIGTVTST 88
Score = 37.9 bits (84), Expect = 0.18
Identities = 19/43 (44%), Positives = 26/43 (60%)
Frame = +2
Query: 389 PTGKKTVLVQGQRNAREAVRHFGPAPGAPRSHTKPYVRTKDMK 517
P G K L++G+ AREAV+HF + + KPYVR+K K
Sbjct: 168 PIGGKCTLLRGETKAREAVKHF---RNEVKGNPKPYVRSKGRK 207
>UniRef50_UPI0000F2DC1A Cluster: PREDICTED: similar to ribosomal
protein L18; n=1; Monodelphis domestica|Rep: PREDICTED:
similar to ribosomal protein L18 - Monodelphis domestica
Length = 184
Score = 54.4 bits (125), Expect = 2e-06
Identities = 24/45 (53%), Positives = 35/45 (77%)
Frame = +1
Query: 247 GDSTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLAL 381
G T+++R+ +PK+ V+AL VT AR+RIL A G+IL+FDQLA+
Sbjct: 72 GTVTDNIRIQDVPKLKVSALRVTSNARSRILKANGKILSFDQLAM 116
>UniRef50_A7Q837 Cluster: Chromosome undetermined scaffold_62, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_62, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 421
Score = 51.2 bits (117), Expect = 2e-05
Identities = 29/84 (34%), Positives = 46/84 (54%)
Frame = +2
Query: 2 GIDINHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPI 181
G+ ++ K +K + T KS DI T +KFN + L+R FMS++N+ P+
Sbjct: 4 GLVVDDK-SKKTKCTAPKSDDIYLKLTVKLYHFLVRKTGSKFNVVTLKRFFMSKVNKLPL 62
Query: 182 SVSRLARHMKKPTREGLIAVVVGT 253
+SRL R M ++G I VV+G+
Sbjct: 63 LLSRLVRFM--DGKKGKIVVVIGS 84
>UniRef50_A5BN99 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 271
Score = 51.2 bits (117), Expect = 2e-05
Identities = 29/84 (34%), Positives = 46/84 (54%)
Frame = +2
Query: 2 GIDINHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPI 181
G+ ++ K +K + T KS DI T +KFN + L+R FMS++N+ P+
Sbjct: 4 GLVVDDK-SKKTKCTAPKSDDIYLKLTVKLYHFLVRKTGSKFNVVTLKRFFMSKVNKLPL 62
Query: 182 SVSRLARHMKKPTREGLIAVVVGT 253
+SRL R M ++G I VV+G+
Sbjct: 63 LLSRLVRFM--DGKKGKIVVVIGS 84
>UniRef50_Q580C7 Cluster: Putative uncharacterized protein; n=1;
Trypanosoma brucei|Rep: Putative uncharacterized protein
- Trypanosoma brucei
Length = 350
Score = 35.9 bits (79), Expect = 0.72
Identities = 21/80 (26%), Positives = 37/80 (46%)
Frame = +1
Query: 103 GQTYKCQIQSDRSTPALYEPYQPATNLCVSFGAPHEEANS*GFDCRGSGDSTNDVRLYKI 282
G ++CQ++ R +P++ +T+ CVS + S G T + +
Sbjct: 223 GMLHRCQVKRTRVSPSVLHKSPTSTSGCVSSSIQMDSTGSCGVSVGREQSITTQLLPSDV 282
Query: 283 PKMTVAALHVTEKARARILA 342
++ VAA + E+ RAR LA
Sbjct: 283 WEVCVAAKNAEEEVRARALA 302
>UniRef50_Q06035 Cluster: Gag,protease,endonuclease, reverse
transcriptase,RNaseH; n=6; Volvox carteri|Rep:
Gag,protease,endonuclease, reverse transcriptase,RNaseH -
Volvox carteri
Length = 1462
Score = 33.5 bits (73), Expect = 3.8
Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 8/53 (15%)
Frame = +2
Query: 122 KFNQIVLRRLFMSRINRPPI--SVSRLARHMKKPTRE------GLIAVVVGTA 256
+F +++ L++S RP I SV LARHM KPT E G++ + GTA
Sbjct: 1244 RFGELIGSLLYLSVGTRPDIAYSVGALARHMSKPTVEHWQAAKGVVRYIAGTA 1296
>UniRef50_Q6UUI0 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 181
Score = 33.1 bits (72), Expect = 5.0
Identities = 33/113 (29%), Positives = 45/113 (39%)
Frame = +1
Query: 121 QIQSDRSTPALYEPYQPATNLCVSFGAPHEEANS*GFDCRGSGDSTNDVRLYKIPKMTVA 300
++ D P +++ +PA L + P E A G D RG G +VRL + P A
Sbjct: 19 RVDGDDGLPGVFDAREPAAGLALDLAEPREVAAQEG-DDRGDG----EVRLDQRP--AAA 71
Query: 301 ALHVTEKARARILAAGGEILTFDQLALRASDWQEDSTGTRSAKCS*GSASLWP 459
L T RI G +T +L L + W T R S G L P
Sbjct: 72 KLGFTS---VRITRTGFRAVTACRLPL-TNPWDTQQTKDRQHTASMGEVVLLP 120
>UniRef50_Q8ZYQ2 Cluster: 50S ribosomal protein L18e; n=7;
Thermoprotei|Rep: 50S ribosomal protein L18e -
Pyrobaculum aerophilum
Length = 122
Score = 32.7 bits (71), Expect = 6.7
Identities = 13/30 (43%), Positives = 22/30 (73%)
Frame = +1
Query: 286 KMTVAALHVTEKARARILAAGGEILTFDQL 375
K+ VAA+ ++ KA +++ AGGE+LT +L
Sbjct: 79 KIIVAAVKISPKAARKVIEAGGEVLTIPEL 108
>UniRef50_Q0SUG4 Cluster: CRISPR-associated protein Csx8, putative;
n=1; Clostridium perfringens SM101|Rep:
CRISPR-associated protein Csx8, putative - Clostridium
perfringens (strain SM101 / Type A)
Length = 447
Score = 32.3 bits (70), Expect = 8.8
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = -1
Query: 375 QLIKSKNFSSSSQNACTSFFGNMKSSHRHLRYLVQ 271
+L KS +F +S+N T+ FGNMK S ++ + V+
Sbjct: 220 ELKKSNSFIENSENTRTTLFGNMKESAEYIGFDVE 254
>UniRef50_Q98RU3 Cluster: 60s ribosomal protein L18; n=1; Guillardia
theta|Rep: 60s ribosomal protein L18 - Guillardia theta
(Cryptomonas phi)
Length = 167
Score = 32.3 bits (70), Expect = 8.8
Identities = 12/39 (30%), Positives = 24/39 (61%)
Frame = +1
Query: 259 NDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQL 375
ND R+ K PK+ + AL+ + + +I+ GG+I +++
Sbjct: 111 NDERISKTPKLKIFALNFSSSVKKKIIENGGQIFKLNEI 149
>UniRef50_Q6CXL9 Cluster: Similarity; n=1; Kluyveromyces lactis|Rep:
Similarity - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 186
Score = 32.3 bits (70), Expect = 8.8
Identities = 12/39 (30%), Positives = 26/39 (66%)
Frame = -3
Query: 223 TSWLLHVARQTRHRDWWPVDTAHKEPA*NDLIEFGICTS 107
+++LL +R + +R+WW VD ++ ++L+E+ I T+
Sbjct: 132 STFLLQGSRDSGNRNWWSVDLGQEQRLQDNLVEWSISTT 170
>UniRef50_A1DA31 Cluster: Putative uncharacterized protein; n=1;
Neosartorya fischeri NRRL 181|Rep: Putative
uncharacterized protein - Neosartorya fischeri (strain
ATCC 1020 / DSM 3700 / NRRL 181)(Aspergillus
fischerianus (strain ATCC 1020 / DSM 3700 / NRRL 181))
Length = 306
Score = 32.3 bits (70), Expect = 8.8
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -3
Query: 199 RQTRHRDWWPVDTAHKEP 146
RQ+ DWWP D HKEP
Sbjct: 179 RQSTKPDWWPSDVPHKEP 196
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 624,673,349
Number of Sequences: 1657284
Number of extensions: 13170356
Number of successful extensions: 36192
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 34920
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36176
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 41488046300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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