Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30686
(594 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L11566-1|AAA16329.1| 188|Homo sapiens ribosomal protein L18 pro... 138 2e-32
BC009708-1|AAH09708.1| 188|Homo sapiens ribosomal protein L18 p... 138 2e-32
BC000374-1|AAH00374.1| 188|Homo sapiens ribosomal protein L18 p... 138 2e-32
AB061825-1|BAB79463.1| 188|Homo sapiens ribosomal protein L18 p... 138 2e-32
BC021743-1|AAH21743.1| 188|Homo sapiens ribosomal protein L18 p... 136 7e-32
DQ403032-1|ABD77165.1| 164|Homo sapiens ribosomal protein L18 p... 111 2e-24
L08961-1|AAC41766.1| 600|Homo sapiens tyrosine kinase protein. 30 7.1
>L11566-1|AAA16329.1| 188|Homo sapiens ribosomal protein L18
protein.
Length = 188
Score = 138 bits (333), Expect = 2e-32
Identities = 77/172 (44%), Positives = 90/172 (52%)
Frame = +2
Query: 2 GIDINHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPI 181
G+DI H DRKVRR E KSQDI TN+ FNQ+VL+RLFMSR NRPP+
Sbjct: 2 GVDIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPPL 61
Query: 182 SVSRLARHMKKPTREGLIAVVVGTAQMT*DCTRYRR*RWLLFMLPKKLVHAFWLLEEKFL 361
S+SR+ R MK P RE AVVVGT + + + + K L
Sbjct: 62 SLSRMIRKMKLPGRENKTAVVVGTITDDVRVQEVPKLKVCALRVTSRARSRILRAGGKIL 121
Query: 362 LLISWLFVPPTGKKTVLVQGQRNAREAVRHFGPAPGAPRSHTKPYVRTKDMK 517
P G TVL+ G R RE RHFG APG P SHTKPYVR+K K
Sbjct: 122 TFDQLALDSPKGCGTVLLSGPRKGREVYRHFGKAPGTPHSHTKPYVRSKGRK 173
Score = 62.5 bits (145), Expect = 1e-09
Identities = 29/45 (64%), Positives = 37/45 (82%)
Frame = +1
Query: 247 GDSTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLAL 381
G T+DVR+ ++PK+ V AL VT +AR+RIL AGG+ILTFDQLAL
Sbjct: 84 GTITDDVRVQEVPKLKVCALRVTSRARSRILRAGGKILTFDQLAL 128
>BC009708-1|AAH09708.1| 188|Homo sapiens ribosomal protein L18
protein.
Length = 188
Score = 138 bits (333), Expect = 2e-32
Identities = 77/172 (44%), Positives = 90/172 (52%)
Frame = +2
Query: 2 GIDINHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPI 181
G+DI H DRKVRR E KSQDI TN+ FNQ+VL+RLFMSR NRPP+
Sbjct: 2 GVDIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPPL 61
Query: 182 SVSRLARHMKKPTREGLIAVVVGTAQMT*DCTRYRR*RWLLFMLPKKLVHAFWLLEEKFL 361
S+SR+ R MK P RE AVVVGT + + + + K L
Sbjct: 62 SLSRMIRKMKLPGRENKTAVVVGTITDDVRVQEVPKLKVCALRVTSRARSRILRAGGKIL 121
Query: 362 LLISWLFVPPTGKKTVLVQGQRNAREAVRHFGPAPGAPRSHTKPYVRTKDMK 517
P G TVL+ G R RE RHFG APG P SHTKPYVR+K K
Sbjct: 122 TFDQLALDSPKGCGTVLLSGPRKGREVYRHFGKAPGTPHSHTKPYVRSKGRK 173
Score = 62.5 bits (145), Expect = 1e-09
Identities = 29/45 (64%), Positives = 37/45 (82%)
Frame = +1
Query: 247 GDSTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLAL 381
G T+DVR+ ++PK+ V AL VT +AR+RIL AGG+ILTFDQLAL
Sbjct: 84 GTITDDVRVQEVPKLKVCALRVTSRARSRILRAGGKILTFDQLAL 128
>BC000374-1|AAH00374.1| 188|Homo sapiens ribosomal protein L18
protein.
Length = 188
Score = 138 bits (333), Expect = 2e-32
Identities = 77/172 (44%), Positives = 90/172 (52%)
Frame = +2
Query: 2 GIDINHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPI 181
G+DI H DRKVRR E KSQDI TN+ FNQ+VL+RLFMSR NRPP+
Sbjct: 2 GVDIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPPL 61
Query: 182 SVSRLARHMKKPTREGLIAVVVGTAQMT*DCTRYRR*RWLLFMLPKKLVHAFWLLEEKFL 361
S+SR+ R MK P RE AVVVGT + + + + K L
Sbjct: 62 SLSRMIRKMKLPGRENKTAVVVGTITDDVRVQEVPKLKVCALRVTSRARSRILRAGGKIL 121
Query: 362 LLISWLFVPPTGKKTVLVQGQRNAREAVRHFGPAPGAPRSHTKPYVRTKDMK 517
P G TVL+ G R RE RHFG APG P SHTKPYVR+K K
Sbjct: 122 TFDQLALDSPKGCGTVLLSGPRKGREVYRHFGKAPGTPHSHTKPYVRSKGRK 173
Score = 62.5 bits (145), Expect = 1e-09
Identities = 29/45 (64%), Positives = 37/45 (82%)
Frame = +1
Query: 247 GDSTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLAL 381
G T+DVR+ ++PK+ V AL VT +AR+RIL AGG+ILTFDQLAL
Sbjct: 84 GTITDDVRVQEVPKLKVCALRVTSRARSRILRAGGKILTFDQLAL 128
>AB061825-1|BAB79463.1| 188|Homo sapiens ribosomal protein L18
protein.
Length = 188
Score = 138 bits (333), Expect = 2e-32
Identities = 77/172 (44%), Positives = 90/172 (52%)
Frame = +2
Query: 2 GIDINHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPI 181
G+DI H DRKVRR E KSQDI TN+ FNQ+VL+RLFMSR NRPP+
Sbjct: 2 GVDIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPPL 61
Query: 182 SVSRLARHMKKPTREGLIAVVVGTAQMT*DCTRYRR*RWLLFMLPKKLVHAFWLLEEKFL 361
S+SR+ R MK P RE AVVVGT + + + + K L
Sbjct: 62 SLSRMIRKMKLPGRENKTAVVVGTITDDVRVQEVPKLKVCALRVTSRARSRILRAGGKIL 121
Query: 362 LLISWLFVPPTGKKTVLVQGQRNAREAVRHFGPAPGAPRSHTKPYVRTKDMK 517
P G TVL+ G R RE RHFG APG P SHTKPYVR+K K
Sbjct: 122 TFDQLALDSPKGCGTVLLSGPRKGREVYRHFGKAPGTPHSHTKPYVRSKGRK 173
Score = 62.5 bits (145), Expect = 1e-09
Identities = 29/45 (64%), Positives = 37/45 (82%)
Frame = +1
Query: 247 GDSTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLAL 381
G T+DVR+ ++PK+ V AL VT +AR+RIL AGG+ILTFDQLAL
Sbjct: 84 GTITDDVRVQEVPKLKVCALRVTSRARSRILRAGGKILTFDQLAL 128
>BC021743-1|AAH21743.1| 188|Homo sapiens ribosomal protein L18
protein.
Length = 188
Score = 136 bits (328), Expect = 7e-32
Identities = 76/172 (44%), Positives = 89/172 (51%)
Frame = +2
Query: 2 GIDINHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPI 181
G+DI H DRKVRR E KSQDI TN+ FNQ+VL+RLFMSR NRPP+
Sbjct: 2 GVDIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPPL 61
Query: 182 SVSRLARHMKKPTREGLIAVVVGTAQMT*DCTRYRR*RWLLFMLPKKLVHAFWLLEEKFL 361
+SR+ R MK P RE AVVVGT + + + + K L
Sbjct: 62 CLSRMIRKMKLPGRENKTAVVVGTITDDVRVQEVPKLKVCALRVTSRARSRILRAGGKIL 121
Query: 362 LLISWLFVPPTGKKTVLVQGQRNAREAVRHFGPAPGAPRSHTKPYVRTKDMK 517
P G TVL+ G R RE RHFG APG P SHTKPYVR+K K
Sbjct: 122 TFDQLALDSPKGCGTVLLSGPRKGREVYRHFGKAPGTPHSHTKPYVRSKGRK 173
Score = 62.5 bits (145), Expect = 1e-09
Identities = 29/45 (64%), Positives = 37/45 (82%)
Frame = +1
Query: 247 GDSTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLAL 381
G T+DVR+ ++PK+ V AL VT +AR+RIL AGG+ILTFDQLAL
Sbjct: 84 GTITDDVRVQEVPKLKVCALRVTSRARSRILRAGGKILTFDQLAL 128
>DQ403032-1|ABD77165.1| 164|Homo sapiens ribosomal protein L18
protein.
Length = 164
Score = 111 bits (266), Expect = 2e-24
Identities = 61/135 (45%), Positives = 73/135 (54%)
Frame = +2
Query: 113 TNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVGTAQMT*DCTRYRR* 292
TN+ FNQ+VL+RLFMSR NRPP+S+SR+ R MK P RE AVVVGT +
Sbjct: 16 TNSTFNQVVLKRLFMSRTNRPPLSLSRMIRKMKLPGRENKTAVVVGTITDDVRVQEVPKL 75
Query: 293 RWLLFMLPKKLVHAFWLLEEKFLLLISWLFVPPTGKKTVLVQGQRNAREAVRHFGPAPGA 472
+ + + K L P G TVL+ G R RE RHFG APG
Sbjct: 76 KVCALRVTSRARSRILRAGGKILTFDQLALDSPKGCGTVLLSGPRKGREVYRHFGKAPGT 135
Query: 473 PRSHTKPYVRTKDMK 517
P SHTKPYVR+K K
Sbjct: 136 PHSHTKPYVRSKGRK 150
Score = 62.5 bits (145), Expect = 1e-09
Identities = 29/45 (64%), Positives = 37/45 (82%)
Frame = +1
Query: 247 GDSTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLAL 381
G T+DVR+ ++PK+ V AL VT +AR+RIL AGG+ILTFDQLAL
Sbjct: 61 GTITDDVRVQEVPKLKVCALRVTSRARSRILRAGGKILTFDQLAL 105
>L08961-1|AAC41766.1| 600|Homo sapiens tyrosine kinase protein.
Length = 600
Score = 29.9 bits (64), Expect = 7.1
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = -3
Query: 442 CLTSISLTLYQYCLLASRRHEEPADQ 365
C+TS + +YCLL RR+++ A+Q
Sbjct: 310 CMTSTIYVITEYCLLVYRRNKDKAEQ 335
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,000,497
Number of Sequences: 237096
Number of extensions: 2185410
Number of successful extensions: 4575
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4267
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4575
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6268037466
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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