Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30686
         (594 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT030448-1|ABP87890.1|  188|Drosophila melanogaster IP16807p pro...   140   1e-33
AY113554-1|AAM29559.1|  188|Drosophila melanogaster RH01814p pro...   140   1e-33
AE014296-1212|AAF50596.1|  188|Drosophila melanogaster CG8615-PA...   140   1e-33
AF145673-1|AAD38648.1|  950|Drosophila melanogaster BcDNA.GH1219...    31   1.2  
AE013599-1030|AAF58840.1|  950|Drosophila melanogaster CG4001-PA...    31   1.2  
AE014296-161|AAF47434.1|  841|Drosophila melanogaster CG13908-PA...    29   6.3  
AY113610-1|AAM29615.1|  827|Drosophila melanogaster RH61467p pro...    28   8.3  
AE014298-1218|AAF46401.2|  827|Drosophila melanogaster CG12772-P...    28   8.3  

>BT030448-1|ABP87890.1|  188|Drosophila melanogaster IP16807p
           protein.
          Length = 188

 Score =  140 bits (340), Expect = 1e-33
 Identities = 85/182 (46%), Positives = 106/182 (58%), Gaps = 10/182 (5%)
 Frame = +2

Query: 2   GIDINHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPI 181
           GIDINHK+DRKVRRTE KSQD+               TN KFN+I+L+RLFMS+INRPP+
Sbjct: 2   GIDINHKYDRKVRRTEPKSQDVYLRLLVKLYRFLQRRTNKKFNRIILKRLFMSKINRPPL 61

Query: 182 SVSRLARHMKKPTREGLIAVVVGTAQMT*DCTRYRR*RWLLFMLPKKLV---HAFWLLEE 352
           S+ R+AR  K   +     VVVGT  +T D          L ++PK  V   H      E
Sbjct: 62  SLQRIARFFKAANQPESTIVVVGT--VTDDAR--------LLVVPKLTVCALHVTQTARE 111

Query: 353 KFL------LLISWLFV-PPTGKKTVLVQGQRNAREAVRHFGPAPGAPRSHTKPYVRTKD 511
           + L      L    L +  PTGK T+L+QG+R AR A +HFG APG P SHT+PYVR+K 
Sbjct: 112 RILKAGGEVLTFDQLALRSPTGKNTLLLQGRRTARTACKHFGKAPGVPHSHTRPYVRSKG 171

Query: 512 MK 517
            K
Sbjct: 172 RK 173



 Score = 68.9 bits (161), Expect = 5e-12
 Identities = 32/47 (68%), Positives = 38/47 (80%)
 Frame = +1

Query: 247 GDSTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRA 387
           G  T+D RL  +PK+TV ALHVT+ AR RIL AGGE+LTFDQLALR+
Sbjct: 84  GTVTDDARLLVVPKLTVCALHVTQTARERILKAGGEVLTFDQLALRS 130


>AY113554-1|AAM29559.1|  188|Drosophila melanogaster RH01814p
           protein.
          Length = 188

 Score =  140 bits (340), Expect = 1e-33
 Identities = 85/182 (46%), Positives = 106/182 (58%), Gaps = 10/182 (5%)
 Frame = +2

Query: 2   GIDINHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPI 181
           GIDINHK+DRKVRRTE KSQD+               TN KFN+I+L+RLFMS+INRPP+
Sbjct: 2   GIDINHKYDRKVRRTEPKSQDVYLRLLVKLYRFLQRRTNKKFNRIILKRLFMSKINRPPL 61

Query: 182 SVSRLARHMKKPTREGLIAVVVGTAQMT*DCTRYRR*RWLLFMLPKKLV---HAFWLLEE 352
           S+ R+AR  K   +     VVVGT  +T D          L ++PK  V   H      E
Sbjct: 62  SLQRIARFFKAANQPESTIVVVGT--VTDDAR--------LLVVPKLTVCALHVTQTARE 111

Query: 353 KFL------LLISWLFV-PPTGKKTVLVQGQRNAREAVRHFGPAPGAPRSHTKPYVRTKD 511
           + L      L    L +  PTGK T+L+QG+R AR A +HFG APG P SHT+PYVR+K 
Sbjct: 112 RILKAGGEVLTFDQLALRSPTGKNTLLLQGRRTARTACKHFGKAPGVPHSHTRPYVRSKG 171

Query: 512 MK 517
            K
Sbjct: 172 RK 173



 Score = 68.9 bits (161), Expect = 5e-12
 Identities = 32/47 (68%), Positives = 38/47 (80%)
 Frame = +1

Query: 247 GDSTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRA 387
           G  T+D RL  +PK+TV ALHVT+ AR RIL AGGE+LTFDQLALR+
Sbjct: 84  GTVTDDARLLVVPKLTVCALHVTQTARERILKAGGEVLTFDQLALRS 130


>AE014296-1212|AAF50596.1|  188|Drosophila melanogaster CG8615-PA
           protein.
          Length = 188

 Score =  140 bits (340), Expect = 1e-33
 Identities = 85/182 (46%), Positives = 106/182 (58%), Gaps = 10/182 (5%)
 Frame = +2

Query: 2   GIDINHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPI 181
           GIDINHK+DRKVRRTE KSQD+               TN KFN+I+L+RLFMS+INRPP+
Sbjct: 2   GIDINHKYDRKVRRTEPKSQDVYLRLLVKLYRFLQRRTNKKFNRIILKRLFMSKINRPPL 61

Query: 182 SVSRLARHMKKPTREGLIAVVVGTAQMT*DCTRYRR*RWLLFMLPKKLV---HAFWLLEE 352
           S+ R+AR  K   +     VVVGT  +T D          L ++PK  V   H      E
Sbjct: 62  SLQRIARFFKAANQPESTIVVVGT--VTDDAR--------LLVVPKLTVCALHVTQTARE 111

Query: 353 KFL------LLISWLFV-PPTGKKTVLVQGQRNAREAVRHFGPAPGAPRSHTKPYVRTKD 511
           + L      L    L +  PTGK T+L+QG+R AR A +HFG APG P SHT+PYVR+K 
Sbjct: 112 RILKAGGEVLTFDQLALRSPTGKNTLLLQGRRTARTACKHFGKAPGVPHSHTRPYVRSKG 171

Query: 512 MK 517
            K
Sbjct: 172 RK 173



 Score = 68.9 bits (161), Expect = 5e-12
 Identities = 32/47 (68%), Positives = 38/47 (80%)
 Frame = +1

Query: 247 GDSTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRA 387
           G  T+D RL  +PK+TV ALHVT+ AR RIL AGGE+LTFDQLALR+
Sbjct: 84  GTVTDDARLLVVPKLTVCALHVTQTARERILKAGGEVLTFDQLALRS 130


>AF145673-1|AAD38648.1|  950|Drosophila melanogaster BcDNA.GH12192
           protein.
          Length = 950

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = -3

Query: 295 PSSSVSCTVSRHLCCPHYHGNQTLTS 218
           P+  + CT S HLCCP      TL S
Sbjct: 53  PNIGIQCTRSHHLCCPRDISGNTLLS 78


>AE013599-1030|AAF58840.1|  950|Drosophila melanogaster CG4001-PA,
           isoform A protein.
          Length = 950

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = -3

Query: 295 PSSSVSCTVSRHLCCPHYHGNQTLTS 218
           P+  + CT S HLCCP      TL S
Sbjct: 53  PNIGIQCTRSHHLCCPRDISGNTLLS 78


>AE014296-161|AAF47434.1|  841|Drosophila melanogaster CG13908-PA
           protein.
          Length = 841

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 5/73 (6%)
 Frame = -3

Query: 310 HEEQPPSSSVSCTVSRHLCCPHYHGNQTLTSWLLHV-----ARQTRHRDWWPVDTAHKEP 146
           H++QPP     C   +H   PH+  + +  S   H      +R++R +    +  AH+  
Sbjct: 144 HQQQPPPPLHHCQQRKHSHSPHHSRHTSPHSHHHHSHHSRHSRRSRRQGSGSLPGAHQGS 203

Query: 145 A*NDLIEFGICTS 107
           A + ++   ICTS
Sbjct: 204 ANHSVMRPSICTS 216


>AY113610-1|AAM29615.1|  827|Drosophila melanogaster RH61467p
           protein.
          Length = 827

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = +3

Query: 309 CYRKSSCTHFGCWRRNSYF*SAGSSCLRLARRQ 407
           C R  +C H GCW+  S   +    C R +R Q
Sbjct: 791 CDRCGACFHNGCWKVRSRCRNQNDPCPRCSRLQ 823


>AE014298-1218|AAF46401.2|  827|Drosophila melanogaster CG12772-PA
           protein.
          Length = 827

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = +3

Query: 309 CYRKSSCTHFGCWRRNSYF*SAGSSCLRLARRQ 407
           C R  +C H GCW+  S   +    C R +R Q
Sbjct: 791 CDRCGACFHNGCWKVRSRCRNQNDPCPRCSRLQ 823


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,749,093
Number of Sequences: 53049
Number of extensions: 649757
Number of successful extensions: 2146
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2063
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2146
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2400202284
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)