Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30682
         (747 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    28   0.091
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    23   3.4  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    23   3.4  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   6.0  

>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 27.9 bits (59), Expect = 0.091
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = -3

Query: 190 ALYYPLVFSRPP*FPNAIWMVLELYQPKQNPDCKWCH 80
           ALY+ L F  PP  P    +V    +PK+   CK+C+
Sbjct: 50  ALYHKLQFRGPPRTPLQPKLVAGKLKPKRQFICKYCN 86


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 13/47 (27%), Positives = 20/47 (42%)
 Frame = +3

Query: 279 QAGEWPDDWRSSIILPLHKKGSTKDCNNYRTLALISHASKILLHIIN 419
           Q G   D W +  +LP H     K+   Y    ++S  +   L+ IN
Sbjct: 283 QFGPVIDSWATQPVLPTHPYQMIKNQQVYDVPWIVSFTNSEGLYAIN 329


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 13/47 (27%), Positives = 20/47 (42%)
 Frame = +3

Query: 279 QAGEWPDDWRSSIILPLHKKGSTKDCNNYRTLALISHASKILLHIIN 419
           Q G   D W +  +LP H     K+   Y    ++S  +   L+ IN
Sbjct: 283 QFGPVIDSWATQPVLPTHPYQMIKNQQVYDVPWIVSFTNSEGLYAIN 329


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = -2

Query: 626 PEGPAISSSSQRSQTPCCSQRS 561
           PE P    S Q  ++P   QRS
Sbjct: 682 PESPTRDKSKQNEKSPSPQQRS 703


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,254
Number of Sequences: 336
Number of extensions: 4256
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19923648
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)