Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30682
(747 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra... 45 2e-06
M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles ... 45 3e-06
AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcript... 43 9e-06
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript... 39 1e-04
AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcript... 38 3e-04
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript... 37 6e-04
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript... 36 0.001
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ... 33 0.009
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein. 33 0.009
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript... 33 0.009
AJ970247-1|CAI96719.1| 132|Anopheles gambiae putative reverse t... 32 0.016
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript... 32 0.016
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript... 32 0.022
AJ970248-1|CAI96720.1| 132|Anopheles gambiae putative reverse t... 31 0.029
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript... 31 0.029
AJ970246-1|CAI96718.1| 132|Anopheles gambiae putative reverse t... 30 0.066
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript... 30 0.087
AJ970251-1|CAI96723.1| 131|Anopheles gambiae putative reverse t... 28 0.35
DQ370036-1|ABD18597.1| 103|Anopheles gambiae putative TIL domai... 26 1.1
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein. 25 1.9
>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
transcriptase protein.
Length = 1049
Score = 45.2 bits (102), Expect = 2e-06
Identities = 23/84 (27%), Positives = 40/84 (47%)
Frame = +3
Query: 258 KICNHIWQAGEWPDDWRSSIILPLHKKGSTKDCNNYRTLALISHASKILLHIINSRIRHF 437
K+ N G +P WR S ++P++KKG D NYR + + +K+ +I + H
Sbjct: 582 KLFNASLANGYFPKAWRKSWMVPIYKKGDRTDAINYRGITSLCAIAKVFELVIYKNLLHA 641
Query: 438 LDWQIPQEQAGFVKGRGTREQILK 509
+ Q GFV + T +++
Sbjct: 642 CRSYLSPYQHGFVPKKSTTTNLVE 665
Score = 31.9 bits (69), Expect = 0.022
Identities = 19/60 (31%), Positives = 27/60 (45%)
Frame = +2
Query: 563 FVDYSKAFDCVGWNCLWRVLQELGVPMHLIALLQSLYYGSQGTVRVDNTMSKRFNFRRGV 742
+ D AFD + L L +LG+P L+ L+S V++D MSK GV
Sbjct: 684 YTDLKAAFDSLPHAILLAKLDKLGIPSPLVQWLKSYLIHRTYIVKIDKHMSKEIVSSSGV 743
>M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles
gambiae T1 retroposon. ).
Length = 975
Score = 44.8 bits (101), Expect = 3e-06
Identities = 26/83 (31%), Positives = 37/83 (44%)
Frame = +3
Query: 258 KICNHIWQAGEWPDDWRSSIILPLHKKGSTKDCNNYRTLALISHASKILLHIINSRIRHF 437
KI N G +P W+S + P+HKKG +NYR + +K I I H
Sbjct: 511 KIFNLSLSLGVFPALWKSCWLFPVHKKGCRSIVSNYRGITQTCATAKTFELCIFPTILHS 570
Query: 438 LDWQIPQEQAGFVKGRGTREQIL 506
I +Q GF+ GR T ++
Sbjct: 571 CSSAISPKQHGFMPGRSTSTNLM 593
>AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcriptase
protein.
Length = 988
Score = 43.2 bits (97), Expect = 9e-06
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Frame = +3
Query: 258 KICNHIWQAGEWPDDWRSSIILPLHKKGSTK-DCNNYRTLALISHASKILLHIINSRIRH 434
K + +AG +PD W+ ++ L K G + ++YR + L+S KIL +I R+
Sbjct: 454 KSYKQLLEAGTFPDAWKRQQLVLLTKSGKPPGEPSSYRPICLLSVLGKILERLIQRRLTT 513
Query: 435 FLD--WQIPQEQAGFVKGRGTREQILKSDN 518
L+ + Q GF KGR T + I + N
Sbjct: 514 HLESTGGLSDPQYGFRKGRSTVDAITRVMN 543
>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 39.1 bits (87), Expect = 1e-04
Identities = 22/80 (27%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Frame = +3
Query: 285 GEWPDDWRSSIILPLHKKGSTK-DCNNYRTLALISHASKILLHIINSRIRHFLD----WQ 449
GE+P W+ ++ L K G + +++R L +++ K+L +I +R+ FL+
Sbjct: 483 GEFPAHWKIQRLVLLQKPGKPPGESSSFRPLGMLNGLGKVLERLILNRLNEFLENGETSH 542
Query: 450 IPQEQAGFVKGRGTREQILK 509
+ Q GF +G+ T + IL+
Sbjct: 543 LSPNQYGFRRGKSTVQGILR 562
>AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcriptase
protein.
Length = 973
Score = 37.9 bits (84), Expect = 3e-04
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Frame = +3
Query: 261 ICNHIWQAGEWPDDWRSSIILPLHKKGSTKD-CNNYRTLALISHASKILLHIINSRIRHF 437
+ + + G +P W+ ++ L K G D + R LALI + +KIL +I +R+ +
Sbjct: 435 VFQNCFDTGFFPIPWKRQKLVLLPKPGKPPDDASALRPLALIDNFAKILEILILNRLVVY 494
Query: 438 LDWQ--IPQEQAGFVKGRGTREQI 503
+ + + Q GF KGR T E I
Sbjct: 495 TEGEHGLSDRQFGFRKGRSTGEAI 518
>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
protein.
Length = 1154
Score = 37.1 bits (82), Expect = 6e-04
Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
Frame = +3
Query: 285 GEWPDDWRSSIILPLHKKGSTK-DCNNYRTLALISHASKILLHIINSRI-RHFLDWQIPQ 458
G +P +W+ ++ L K G + ++YR L+++ K+L +I +R+ +H D P+
Sbjct: 477 GTFPSEWKRQRLVLLSKTGKPPGESSSYRPLSMLDALGKVLEQLILNRLNKHLEDPDSPR 536
Query: 459 ---EQAGFVKGRGT 491
Q GF +GR T
Sbjct: 537 LSDAQYGFRRGRST 550
>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
protein.
Length = 1201
Score = 36.3 bits (80), Expect = 0.001
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 5/74 (6%)
Frame = +3
Query: 285 GEWPDDWRSSIILPLHKKGSTK-DCNNYRTLALISHASKILLHIINSRI-RHFLDWQIPQ 458
G +P W+ ++ L K G + ++YR L ++ K+L +I +R+ RH PQ
Sbjct: 538 GTFPPQWKRQRLVLLPKPGKPPGESSSYRPLCMLDALGKVLERLILNRLNRHIEQQDSPQ 597
Query: 459 ---EQAGFVKGRGT 491
Q GF +GR T
Sbjct: 598 LSDAQYGFRRGRST 611
>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 1222
Score = 33.1 bits (72), Expect = 0.009
Identities = 19/72 (26%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
Frame = +3
Query: 291 WPDDWRSSIILPLHKKGSTK-DCNNYRTLALISHASKILLHIINSRIRHFLDW----QIP 455
+P W+ ++ L K+G + ++YR L ++ K+L +I +R+ L+ ++
Sbjct: 525 FPAQWKRQRLVLLPKQGKPPGESSSYRPLCMLDALGKVLERLILNRLNEHLEEPSSPRLS 584
Query: 456 QEQAGFVKGRGT 491
Q GF +GR T
Sbjct: 585 DRQFGFRRGRST 596
>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
Length = 1212
Score = 33.1 bits (72), Expect = 0.009
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 5/76 (6%)
Frame = +3
Query: 279 QAGEWPDDWRSSIILPLHKKGSTKDCN-NYRTLALISHASKILLHIINSRIRHFLD---- 443
+ +P W+ ++ L K G N +YR L ++ K+L +I +R+ + L+
Sbjct: 528 ETATFPAPWKRQRLVLLPKPGKPPGSNGSYRPLCMLDALGKVLEKLILNRLHNHLEDPAA 587
Query: 444 WQIPQEQAGFVKGRGT 491
++ Q GF +GR T
Sbjct: 588 VRLSDRQHGFRRGRST 603
>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
protein.
Length = 1248
Score = 33.1 bits (72), Expect = 0.009
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +2
Query: 566 VDYSKAFDCVGWNCLWRVLQELGVPMHLIALLQSLY 673
+D AF+ W C+ L++ GVP+ L +LQ +
Sbjct: 573 LDVRNAFNTASWQCIAEALRDKGVPLQLCNILQDYF 608
>AJ970247-1|CAI96719.1| 132|Anopheles gambiae putative reverse
transcriptase protein.
Length = 132
Score = 32.3 bits (70), Expect = 0.016
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Frame = +2
Query: 509 IRQLIERCYE-FDT--PVILCFVDYSKAFDCVGWNCLWRVLQELGVPMHLIALLQSLYYG 679
+ Q + C++ D V + + D AFD + L L LG+P L+A L+S G
Sbjct: 48 LMQFVSSCHKSIDARLQVDVIYTDLKAAFDRISHVILLAKLDRLGLPDPLVAWLRSYLMG 107
Query: 680 SQGTVRVDNTMSKRFNFRRGV 742
+VR+ +S+ GV
Sbjct: 108 RTYSVRMGPHLSRSLRASSGV 128
>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
protein.
Length = 1099
Score = 32.3 bits (70), Expect = 0.016
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 6/75 (8%)
Frame = +3
Query: 285 GEWPDDWRSS--IILPLHKKGSTKDCNNYRTLALISHASKILLHIINSRIRHFL-DWQIP 455
G +P W+ +++P K S C+ YR L ++ K+L +I +R+ FL D + P
Sbjct: 463 GTFPAAWKRQRLVLIPKPGKPSGVSCS-YRPLCMLDALGKVLERLILNRLHEFLEDPESP 521
Query: 456 Q---EQAGFVKGRGT 491
+ Q GF +G T
Sbjct: 522 RLSDRQYGFRRGCST 536
>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
protein.
Length = 1209
Score = 31.9 bits (69), Expect = 0.022
Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Frame = +3
Query: 327 LHKKGSTKDCNNYRTLALISHASKILLHIINSRIRHFLDWQ--IPQEQAGFVKG-RGTRE 497
L K +TK+ YR L +S+ +K+L +I +++ D + +EQ G K +G ++
Sbjct: 522 LPKDQNTKNPAKYRPLTCLSNLNKVLSSVITQKVKDHCDTNNVMTEEQTGRRKNTQGCKD 581
Query: 498 QIL 506
Q++
Sbjct: 582 QVI 584
Score = 31.1 bits (67), Expect = 0.038
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Frame = +2
Query: 557 LCFVDYSKAFDCVGWNCLWRVLQELGVPMHLIALLQSLYYGSQGTVRVDN----TMSKRF 724
+ ++DY KA+D V + L +VLQ V ++I L+Q ++ V + S+
Sbjct: 602 MAYIDYKKAYDSVPHSYLLKVLQLYKVDGNVIKLMQHAMGMWSTSLHVTDGKVVLRSRSL 661
Query: 725 NFRRGV 742
N RRG+
Sbjct: 662 NIRRGI 667
>AJ970248-1|CAI96720.1| 132|Anopheles gambiae putative reverse
transcriptase protein.
Length = 132
Score = 31.5 bits (68), Expect = 0.029
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Frame = +2
Query: 509 IRQLIERCYE-FDT--PVILCFVDYSKAFDCVGWNCLWRVLQELGVPMHLIALLQSLYYG 679
+ Q + C++ D V + + D AFD + L L LG+P L+A L+S G
Sbjct: 48 LMQFVSSCHKSIDARLQVDVIYTDLKAAFDRISHVILLAKLDRLGLPDPLVAWLRSYLMG 107
Query: 680 SQGTVRVDNTMSKRFNFRRGV 742
+VR+ +S+ GV
Sbjct: 108 RTYSVRMGPHLSRFLRASSGV 128
>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 31.5 bits (68), Expect = 0.029
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +2
Query: 566 VDYSKAFDCVGWNCLWRVLQELGVPMHLIALLQSLY 673
+D AF+ W + L+E GVP L+ +LQS +
Sbjct: 588 LDVRNAFNTASWQSIANALREKGVPSGLLRILQSYF 623
>AJ970246-1|CAI96718.1| 132|Anopheles gambiae putative reverse
transcriptase protein.
Length = 132
Score = 30.3 bits (65), Expect = 0.066
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Frame = +2
Query: 509 IRQLIERCYE-FDT--PVILCFVDYSKAFDCVGWNCLWRVLQELGVPMHLIALLQSLYYG 679
+ Q + C++ D V + + D AFD + L L LG+P L+A L+S G
Sbjct: 48 LMQFVSSCHKSIDARLQVDVIYTDLKAAFDRISHVILLAKLDRLGLPDPLVAWLRSYLMG 107
Query: 680 SQGTVRVDNTMSK 718
+VR+ +S+
Sbjct: 108 RTYSVRMGPHLSR 120
>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
protein.
Length = 1222
Score = 29.9 bits (64), Expect = 0.087
Identities = 11/41 (26%), Positives = 22/41 (53%)
Frame = +2
Query: 551 VILCFVDYSKAFDCVGWNCLWRVLQELGVPMHLIALLQSLY 673
+++ +D AF+ W C+ L++ GVP L +L+ +
Sbjct: 570 LLVVALDVRNAFNTASWQCIATALEDKGVPRQLRNILRDYF 610
>AJ970251-1|CAI96723.1| 131|Anopheles gambiae putative reverse
transcriptase protein.
Length = 131
Score = 27.9 bits (59), Expect = 0.35
Identities = 19/60 (31%), Positives = 25/60 (41%)
Frame = +2
Query: 563 FVDYSKAFDCVGWNCLWRVLQELGVPMHLIALLQSLYYGSQGTVRVDNTMSKRFNFRRGV 742
+ D AFD V L L LG L+ L+S + V+VD S+ F GV
Sbjct: 69 YTDLKAAFDRVNHRLLLAKLARLGFSASLVEWLESYLTNRRYRVKVDCMTSREFVSCSGV 128
>DQ370036-1|ABD18597.1| 103|Anopheles gambiae putative TIL domain
protein protein.
Length = 103
Score = 26.2 bits (55), Expect = 1.1
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +1
Query: 295 RMIGGAP*YCLYTKKDPRKTVTTIGP 372
R IGG+ C++ KK PR+T TT P
Sbjct: 81 RAIGGS---CIWAKKCPRRTQTTKKP 103
>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
Length = 1132
Score = 25.4 bits (53), Expect = 1.9
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +1
Query: 31 TERWRRYCESLYKNPTND 84
T RW CE +Y NP N+
Sbjct: 370 TGRWVPICEPVYSNPINN 387
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 822,932
Number of Sequences: 2352
Number of extensions: 17874
Number of successful extensions: 41
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76923555
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -