Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30681
(710 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_50629| Best HMM Match : Extensin_2 (HMM E-Value=0.94) 35 0.057
SB_22126| Best HMM Match : Glyco_transf_10 (HMM E-Value=1.9) 33 0.30
SB_16955| Best HMM Match : SLAP (HMM E-Value=0.048) 33 0.30
SB_8696| Best HMM Match : Pox_A32 (HMM E-Value=0.16) 32 0.40
SB_47942| Best HMM Match : TSP_1 (HMM E-Value=0) 31 0.92
SB_35934| Best HMM Match : HC2 (HMM E-Value=4.4) 31 0.92
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.92
SB_50256| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.92
SB_31131| Best HMM Match : Drf_FH1 (HMM E-Value=2.4) 31 0.92
SB_151| Best HMM Match : zf-CCHC (HMM E-Value=8.9e-05) 31 0.92
SB_28630| Best HMM Match : DUF1665 (HMM E-Value=3.4) 30 1.6
SB_9683| Best HMM Match : RCSD (HMM E-Value=2.8) 30 1.6
SB_7913| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_5427| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_38269| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_34601| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_39858| Best HMM Match : Spectrin (HMM E-Value=2.6e-05) 30 2.1
SB_20713| Best HMM Match : Pkinase (HMM E-Value=0) 30 2.1
SB_18653| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_12669| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_51476| Best HMM Match : Ion_trans (HMM E-Value=6.29996e-41) 29 3.7
SB_46439| Best HMM Match : RVT_1 (HMM E-Value=4.8e-25) 29 3.7
SB_21143| Best HMM Match : Myosin_tail_1 (HMM E-Value=0.42) 29 3.7
SB_50370| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_7782| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_56888| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_43849| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_37844| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_31972| Best HMM Match : RVT_1 (HMM E-Value=2.4e-14) 28 6.5
SB_17670| Best HMM Match : RVT_1 (HMM E-Value=6.1e-25) 28 6.5
SB_47161| Best HMM Match : rve (HMM E-Value=1.8e-22) 28 6.5
SB_34910| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_17276| Best HMM Match : E-MAP-115 (HMM E-Value=0.57) 28 6.5
SB_8541| Best HMM Match : Vicilin_N (HMM E-Value=1.7) 28 6.5
SB_4115| Best HMM Match : Homeobox (HMM E-Value=9.4e-08) 28 6.5
SB_47990| Best HMM Match : RRM_1 (HMM E-Value=7.8e-28) 28 8.6
SB_25899| Best HMM Match : Ribonuc_2-5A (HMM E-Value=0) 28 8.6
SB_31408| Best HMM Match : ENTH (HMM E-Value=0) 28 8.6
SB_24848| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6
SB_6746| Best HMM Match : rve (HMM E-Value=2.4) 28 8.6
>SB_50629| Best HMM Match : Extensin_2 (HMM E-Value=0.94)
Length = 450
Score = 35.1 bits (77), Expect = 0.057
Identities = 33/111 (29%), Positives = 49/111 (44%), Gaps = 4/111 (3%)
Frame = +2
Query: 287 QRISDIETSRNKQFS----ANLRHRSSRQKQFPVNLRQRTISKTETVTSSSPIVQLSENH 454
Q+ I+T R Q A R RS ++ PV+ RQR+ S S Q S +
Sbjct: 242 QQYQPIQTRRRSQSPGQTYATKRGRSHSPRRVPVSPRQRSNSPRRVPVSPR---QRSNS- 297
Query: 455 Q*TRQLPVKPRYRSRNPSKKQPSSTSAQTDSKKHYYTTRKQPYRPGRVQYS 607
R++PV PR RS +P + S ++ ++R+Q P RV S
Sbjct: 298 --PRRVPVSPRQRSNSPRRVPVSPRQRPNLPRRVPLSSRQQSNSPRRVPLS 346
Score = 33.9 bits (74), Expect = 0.13
Identities = 26/83 (31%), Positives = 42/83 (50%)
Frame = +2
Query: 341 RHRSSRQKQFPVNLRQRTISKTETVTSSSPIVQLSENHQ*TRQLPVKPRYRSRNPSKKQP 520
R RS+ ++ PV+ RQR+ S S Q S + R++PV PR R P ++ P
Sbjct: 278 RQRSNSPRRVPVSPRQRSNSPRRVPVSPR---QRSNS---PRRVPVSPRQRPNLP-RRVP 330
Query: 521 SSTSAQTDSKKHYYTTRKQPYRP 589
S+ Q++S + + +Q RP
Sbjct: 331 LSSRQQSNSPRRVPLSPRQQSRP 353
>SB_22126| Best HMM Match : Glyco_transf_10 (HMM E-Value=1.9)
Length = 460
Score = 32.7 bits (71), Expect = 0.30
Identities = 37/131 (28%), Positives = 56/131 (42%)
Frame = +1
Query: 181 TYRSRDPRKWRVDSASRDGVLK*I*RMAIYRQKQFSANLRHRNIKKQTVLSESPTQIIKT 360
T R +D RK RV + G R I+ + Q + TVL E+ IIKT
Sbjct: 57 TERRKDDRKLRVVVSGSCGS-----RRRIHGKHQVFTTSTQNPSGRPTVLLENSEPIIKT 111
Query: 361 ETVPSESSTKNHQQDRNSYQQFSNSTVIRKPPVNQTVTCETSLQKPKPIEETAVFYQRTN 540
++ + + H++D S N P TVT E S +PI+ + RT+
Sbjct: 112 QS--HFMAFRTHRKDPQSLHSTQN------PSGRTTVTLEHS----EPIDTQSFRALRTH 159
Query: 541 RQQKTLLHDSE 573
R++ LH S+
Sbjct: 160 REEPQSLHSSQ 170
>SB_16955| Best HMM Match : SLAP (HMM E-Value=0.048)
Length = 1952
Score = 32.7 bits (71), Expect = 0.30
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 5/59 (8%)
Frame = +2
Query: 383 RQRTISKT-ETVTSS--SPIVQLSENHQ*TRQLPVKPR--YRSRNPSKKQPSSTSAQTD 544
R+R S T E V S SP V S + R+ P KP+ YR + P +++PSS+S +D
Sbjct: 1224 RKRVRSFTPEQVKSDAPSPPVNASRDLPYYREYPTKPKDLYRGKKPRRQRPSSSSESSD 1282
>SB_8696| Best HMM Match : Pox_A32 (HMM E-Value=0.16)
Length = 1152
Score = 32.3 bits (70), Expect = 0.40
Identities = 28/76 (36%), Positives = 36/76 (47%), Gaps = 6/76 (7%)
Frame = +1
Query: 142 TNRNDLWSAFT---TVTYRSRDPRKWRVDSASRDGVLK*I*RMAIYRQKQF---SANLRH 303
T R +L +AFT V R+ + R+WR S SR I + RQ+ SANL
Sbjct: 865 TRRRELAAAFTRTPAVNQRATEHRRWRPHSRSR------IDHLPFRRQRYALPDSANLDC 918
Query: 304 RNIKKQTVLSESPTQI 351
+ KQT E PT I
Sbjct: 919 KQWSKQTFRHEGPTHI 934
>SB_47942| Best HMM Match : TSP_1 (HMM E-Value=0)
Length = 2195
Score = 31.1 bits (67), Expect = 0.92
Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 5/61 (8%)
Frame = +2
Query: 485 RYRSRNPSKKQP-----SSTSAQTDSKKHYYTTRKQPYRPGRVQYSIFKECCISCGYVTI 649
RYR RN S+ P + + D ++ T P G +++ F EC +SCG T
Sbjct: 288 RYRYRNCSQPLPQHGGRNCSHLGDDKEQENCNTHMCPIHGGYTEWTNFTECTVSCGNGTK 347
Query: 650 F 652
F
Sbjct: 348 F 348
>SB_35934| Best HMM Match : HC2 (HMM E-Value=4.4)
Length = 181
Score = 31.1 bits (67), Expect = 0.92
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = +1
Query: 355 KTETVPSESSTKNHQQDRNSYQQFSNSTVIRKPPVNQTVTCETSLQKPKPIEETAVFYQ 531
KTE + + S T+ Q Y Q T ++PPV T + K P++ T V+ Q
Sbjct: 21 KTEALLASSITRPLLQYTTVYSQ----TCTKRPPVQHTTVSSQTCTKRSPVQHTTVYSQ 75
Score = 28.3 bits (60), Expect = 6.5
Identities = 21/89 (23%), Positives = 37/89 (41%)
Frame = +1
Query: 295 LRHRNIKKQTVLSESPTQIIKTETVPSESSTKNHQQDRNSYQQFSNSTVIRKPPVNQTVT 474
++H + QT + P Q TV S + K Y + T ++PPV T+
Sbjct: 67 VQHTTVYSQTCIKRLPVQYT---TVYSLTCIKRLPVQ---YTTVYSQTCTKRPPVQYTMV 120
Query: 475 CETSLQKPKPIEETAVFYQRTNRQQKTLL 561
+ K P++ T V Q + + T++
Sbjct: 121 YSQTCTKRPPVQYTMVNIQSSTYKMTTVM 149
>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1375
Score = 31.1 bits (67), Expect = 0.92
Identities = 23/101 (22%), Positives = 46/101 (45%), Gaps = 6/101 (5%)
Frame = +1
Query: 316 KQTVLSESPTQIIKTETVPSESSTKNHQQDRNSYQQ--FSNSTVIRKPPVNQTVTCETSL 489
K+TV+ +PT+ + T+ +P+E + ++ Q + STV ++ VT +T +
Sbjct: 281 KRTVIKPTPTESVVTKPIPAEGAVTKQTSTESAVTQPEPTESTVTKQITTESVVTKQTPI 340
Query: 490 QK----PKPIEETAVFYQRTNRQQKTLLHDSETAIQTGSCT 600
+ P P E+ V T+ +E+ + T + T
Sbjct: 341 ESAVTMPAP-TESVVTMPAPTESVVTMPAPTESVVTTATPT 380
>SB_50256| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 229
Score = 31.1 bits (67), Expect = 0.92
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = +1
Query: 355 KTETVPSESSTKNHQQDRNSYQQFSNSTVIRKPPVNQTVTCETSLQKPKPIEETAVFYQ 531
KTE + + S T+ Q Y Q T ++PPV T + K P++ T V+ Q
Sbjct: 21 KTEALLASSITRPLLQYTTVYSQ----TCTKRPPVQHTTVSSQTCTKRSPVQHTTVYSQ 75
Score = 29.1 bits (62), Expect = 3.7
Identities = 16/65 (24%), Positives = 30/65 (46%)
Frame = +1
Query: 352 IKTETVPSESSTKNHQQDRNSYQQFSNSTVIRKPPVNQTVTCETSLQKPKPIEETAVFYQ 531
++ TV S++ TK Y + T ++PPV T + K P++ T V++Q
Sbjct: 99 VQYTTVYSQTCTKRPPVQ---YTTVYSQTCTKRPPVQHTTVYSHTCTKRTPVQYTMVYWQ 155
Query: 532 RTNRQ 546
++
Sbjct: 156 TCTKR 160
>SB_31131| Best HMM Match : Drf_FH1 (HMM E-Value=2.4)
Length = 407
Score = 31.1 bits (67), Expect = 0.92
Identities = 23/101 (22%), Positives = 46/101 (45%), Gaps = 6/101 (5%)
Frame = +1
Query: 316 KQTVLSESPTQIIKTETVPSESSTKNHQQDRNSYQQ--FSNSTVIRKPPVNQTVTCETSL 489
K+TV+ +PT+ + T+ +P+E + ++ Q + STV ++ VT +T +
Sbjct: 33 KRTVIKPTPTESVVTKPIPAEGAVTKQTSTESAVTQPEPTESTVTKQITTESVVTKQTPI 92
Query: 490 QK----PKPIEETAVFYQRTNRQQKTLLHDSETAIQTGSCT 600
+ P P E+ V T+ +E+ + T + T
Sbjct: 93 ESAVTMPAP-TESVVTMPAPTESVVTMPAPTESVVTTATPT 132
>SB_151| Best HMM Match : zf-CCHC (HMM E-Value=8.9e-05)
Length = 1382
Score = 31.1 bits (67), Expect = 0.92
Identities = 27/91 (29%), Positives = 40/91 (43%)
Frame = +1
Query: 361 ETVPSESSTKNHQQDRNSYQQFSNSTVIRKPPVNQTVTCETSLQKPKPIEETAVFYQRTN 540
+ +P++ S + QQD NS Q +T PP+ Q E + + P+ T VFYQ +
Sbjct: 847 KAMPNDPSLEIDQQDSNS-QNHPRATP-PTPPITQQ---EITHSQQSPVTTTNVFYQWID 901
Query: 541 RQQKTLLHDSETAIQTGSCTIFYFQRVLYFL 633
L+ ET +Q T LY L
Sbjct: 902 ----NLVEFEETIVQPQESTTMSIAEALYKL 928
>SB_28630| Best HMM Match : DUF1665 (HMM E-Value=3.4)
Length = 428
Score = 30.3 bits (65), Expect = 1.6
Identities = 26/109 (23%), Positives = 55/109 (50%), Gaps = 3/109 (2%)
Frame = +2
Query: 278 NSSQRISDIETSRNKQFSANLRHRSSRQKQFPVNLRQRTISKTETVTSSSPIVQLSENHQ 457
+S ++ S R++ S + R RS +++ + R R+ S+ + +S S ++ S+ +
Sbjct: 266 HSRKKKSRKHRHRSRSSSLSSRRRSKHKRK---SKRDRSRSRDRS-SSKSKSLRRSKKYS 321
Query: 458 *TRQLPVKPRYRSRNPSKKQPSSTSAQTDSKKHYYTTRKQP---YRPGR 595
+R + R RSR+ S + + +++ +KH +T P YR G+
Sbjct: 322 RSRSRSSERRRRSRSRSTEHRYRSRSRSPRRKHRRSTSTSPSRRYRSGK 370
>SB_9683| Best HMM Match : RCSD (HMM E-Value=2.8)
Length = 232
Score = 30.3 bits (65), Expect = 1.6
Identities = 27/109 (24%), Positives = 46/109 (42%), Gaps = 3/109 (2%)
Frame = +2
Query: 263 PFIGKNSSQRISDIETSRNKQFSANLRHRSSRQKQ-FPVNLRQRTISK-TETVTSSSPIV 436
P I S I + S + ++R +K F ++ + + T T+T++S
Sbjct: 20 PSIQATHSSSIKTRDASLSSSLMPSIRSVVVTEKTTFATSMNTKAFNTMTNTMTTTSSFT 79
Query: 437 QLSENHQ*-TRQLPVKPRYRSRNPSKKQPSSTSAQTDSKKHYYTTRKQP 580
SE + T + P YR+ NP+ S TS +S K +T+ P
Sbjct: 80 SKSETRESVTHSMSRFPAYRTVNPTPVTQSPTSHSHESIKTSSSTKNIP 128
>SB_7913| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 336
Score = 30.3 bits (65), Expect = 1.6
Identities = 23/89 (25%), Positives = 38/89 (42%), Gaps = 1/89 (1%)
Frame = +2
Query: 314 RNKQFSANLRHRSSRQKQFPVNLRQRTISKTETVTSSSPIVQLSENHQ*TRQLPVKPRY- 490
R A+ R SR + R+R+ S S SP + +R + R+
Sbjct: 211 RRSHSPAHHRRSRSRSRSRSPRRRRRSRSPRRRRRSRSPSPHHRSHRSRSRSRSPRRRHS 270
Query: 491 RSRNPSKKQPSSTSAQTDSKKHYYTTRKQ 577
RSR+P+ ++ S S + KKH +K+
Sbjct: 271 RSRSPTHRRHRSRSHSPEKKKHKKKEKKE 299
>SB_5427| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 374
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = +2
Query: 269 IGKNSSQRISDIETSRNKQFSANLRHRSSRQKQFPVNLRQRTISKTETVTSSSPI 433
+G D ET K+ SAN+RH ++ + + R R +T T SPI
Sbjct: 93 VGLGKKDHSVDEETIEEKEESANIRHAAAGVYRTRNDPRTRNYPRTRNNTEESPI 147
>SB_38269| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 732
Score = 29.9 bits (64), Expect = 2.1
Identities = 26/92 (28%), Positives = 36/92 (39%)
Frame = +2
Query: 272 GKNSSQRISDIETSRNKQFSANLRHRSSRQKQFPVNLRQRTISKTETVTSSSPIVQLSEN 451
G N S+R+ FS + H +L+ I TE V Q EN
Sbjct: 546 GSNESKRVK--AEYNEGAFSPRIEHFDG----IAPDLKLENIKDTELVNMPHRTGQPEEN 599
Query: 452 HQ*TRQLPVKPRYRSRNPSKKQPSSTSAQTDS 547
H +K RS SK++PSS A+ +S
Sbjct: 600 HPSLSPPDLKDAPRSEAHSKRRPSSARARANS 631
>SB_34601| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1391
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +1
Query: 364 TVPSESSTKNHQQDRNSYQQFSNSTVIRKPPVNQTVTCETSLQK-PKPIEETA 519
++P ES+T Q RNS S T+ PP Q + ++ + P P T+
Sbjct: 609 SLPGESNTYQSQVHRNSTGSTSQQTLYSNPPPGQPINVQSQIYGFPGPTGSTS 661
>SB_39858| Best HMM Match : Spectrin (HMM E-Value=2.6e-05)
Length = 3397
Score = 29.9 bits (64), Expect = 2.1
Identities = 19/59 (32%), Positives = 27/59 (45%)
Frame = +3
Query: 390 EPSARQKQLPAVLQ*YSYQKTTSEPDSYL*NLATEAETHRRNSRLLPAHKQTAKNIITR 566
EPS ++K L + + K EPDS ++ ET R + H + K IITR
Sbjct: 356 EPSWKKKPLKMSI---ASSKIDKEPDSEAVGVSYPLETSEREKEFVDVHGRIIKTIITR 411
>SB_20713| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 492
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/57 (31%), Positives = 30/57 (52%)
Frame = +1
Query: 286 SANLRHRNIKKQTVLSESPTQIIKTETVPSESSTKNHQQDRNSYQQFSNSTVIRKPP 456
SAN+ HR+IK +L +S T ++K ++ + + D + Y S ST+ K P
Sbjct: 141 SANVLHRDIKPSNLLVDSETLMLKIGDF-GQTRVVDPEFDHDGYLTHSPSTLWYKAP 196
>SB_18653| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 29.9 bits (64), Expect = 2.1
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +1
Query: 319 QTVLSESPTQIIKTETVPSESSTKNHQQDRNSYQQFSNSTVIRKPP 456
Q ++E+ TQI+K V + S + HQ N + ST +R P
Sbjct: 81 QLRMNENITQIVKFTVVVQDISLRPHQTSTNIIIPYGGSTTLRVSP 126
>SB_12669| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 330
Score = 29.5 bits (63), Expect = 2.8
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
Frame = +2
Query: 248 KYKGWPFIGKNSSQRISDIETSRNKQFSANLRH----RSSRQKQFPVNLRQRTISK 403
K K P + K S +R + KQ+ + + H + RQKQ NL++R++SK
Sbjct: 256 KQKDDPKLIKKSLKRREKQKEKSRKQWKSRIEHTQKQKEDRQKQRQKNLKERSLSK 311
>SB_51476| Best HMM Match : Ion_trans (HMM E-Value=6.29996e-41)
Length = 823
Score = 29.1 bits (62), Expect = 3.7
Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = +2
Query: 341 RHRSSRQKQFPVNLRQRTISKTETVTSSSPIVQLSENHQ*TRQLPVKPRY-RSRNPSKKQ 517
R +S P+N+ +R ++VTS RQLP +P Y +SRN S+
Sbjct: 710 RLKSHAHAGHPINVHRRIRPVQKSVTSDLSTKPTGSRGMPRRQLPQQPTYGQSRNGSQIS 769
Query: 518 PSSTSAQTDSK 550
S S +++
Sbjct: 770 LSGKSPYVENR 780
>SB_46439| Best HMM Match : RVT_1 (HMM E-Value=4.8e-25)
Length = 1641
Score = 29.1 bits (62), Expect = 3.7
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +1
Query: 268 YRQKQFSANLRHRNIKKQTVLSESPTQIIKTETVPSESSTKN 393
YR+ SA L+ +K S +P Q++ T +ES+TKN
Sbjct: 817 YRKLPKSAKLKQSGVKIFAYQSTNPLQVLGKFTAITESTTKN 858
>SB_21143| Best HMM Match : Myosin_tail_1 (HMM E-Value=0.42)
Length = 870
Score = 29.1 bits (62), Expect = 3.7
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Frame = +1
Query: 394 HQQDRNSYQQFSNSTVIRKPPVNQTVTCETSLQKPKPIEETAVFYQRTNRQQK--TLLHD 567
H+Q+R +Y + I + T + +L+K + E TAV Q T R+Q+ TLL +
Sbjct: 660 HEQERIAYDHGTREAKI-------SATAKKNLEKARAAELTAVNQQATQREQQLTTLLQE 712
Query: 568 SE 573
+E
Sbjct: 713 TE 714
>SB_50370| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1059
Score = 28.7 bits (61), Expect = 4.9
Identities = 21/78 (26%), Positives = 36/78 (46%)
Frame = +2
Query: 347 RSSRQKQFPVNLRQRTISKTETVTSSSPIVQLSENHQ*TRQLPVKPRYRSRNPSKKQPSS 526
R + P++ +S ++ +S P V NH Q+P R ++ + QPS+
Sbjct: 924 RGANGSPLPISTMALPVSFVNSLINSHPSV----NHTSRLQIPTS-RLQTHTTTI-QPST 977
Query: 527 TSAQTDSKKHYYTTRKQP 580
T QT + KH+ T + P
Sbjct: 978 TRFQTPAAKHHTTVLQTP 995
>SB_7782| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 539
Score = 28.7 bits (61), Expect = 4.9
Identities = 21/90 (23%), Positives = 38/90 (42%)
Frame = +1
Query: 292 NLRHRNIKKQTVLSESPTQIIKTETVPSESSTKNHQQDRNSYQQFSNSTVIRKPPVNQTV 471
+L+ + K+ P + E SS +N +++ N Y +N+ + PP N
Sbjct: 105 SLKSKAKSKKNKSRTLPMTVDSNEESSDTSSLENKKKNLNKYPVKNNADRLLVPPRNDLN 164
Query: 472 TCETSLQKPKPIEETAVFYQRTNRQQKTLL 561
E K + E A ++ R++K LL
Sbjct: 165 DTEEDSLSKKQLREAA---KQKKREEKILL 191
>SB_56888| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 284
Score = 28.3 bits (60), Expect = 6.5
Identities = 11/45 (24%), Positives = 21/45 (46%)
Frame = +1
Query: 454 PVNQTVTCETSLQKPKPIEETAVFYQRTNRQQKTLLHDSETAIQT 588
P +T ++ P P+ + A FYQ +++ D E ++ T
Sbjct: 73 PQRMVITERGEIRSPTPLNKAAEFYQSFSKENLFTNEDEENSVDT 117
>SB_43849| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 771
Score = 28.3 bits (60), Expect = 6.5
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -3
Query: 276 LPINGHPLYLFQYPISRRAIDAPLSGVP 193
LPI G PL + YP S + P SG+P
Sbjct: 689 LPIIGIPLPIIGYPTSYHRVVFPSSGIP 716
>SB_37844| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 274
Score = 28.3 bits (60), Expect = 6.5
Identities = 11/45 (24%), Positives = 21/45 (46%)
Frame = +1
Query: 454 PVNQTVTCETSLQKPKPIEETAVFYQRTNRQQKTLLHDSETAIQT 588
P +T ++ P P+ + A FYQ +++ D E ++ T
Sbjct: 169 PQRMVITERGEIRSPTPLNKAAEFYQSFSKENLFTNEDEENSVDT 213
>SB_31972| Best HMM Match : RVT_1 (HMM E-Value=2.4e-14)
Length = 1242
Score = 28.3 bits (60), Expect = 6.5
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +1
Query: 268 YRQKQFSANLRHRNIKKQTVLSESPTQIIKTETVPSESSTKN 393
YR+ SA L +K S +P Q++ T +ES+TKN
Sbjct: 311 YRKLPKSAKLEQSGVKIFAYQSTNPLQVLGKFTAITESTTKN 352
>SB_17670| Best HMM Match : RVT_1 (HMM E-Value=6.1e-25)
Length = 1271
Score = 28.3 bits (60), Expect = 6.5
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +1
Query: 268 YRQKQFSANLRHRNIKKQTVLSESPTQIIKTETVPSESSTKN 393
YR+ SA L +K S +P Q++ T +ES+TKN
Sbjct: 304 YRKLPKSAKLEQSGVKIFAYQSTNPLQVLGKFTAITESTTKN 345
>SB_47161| Best HMM Match : rve (HMM E-Value=1.8e-22)
Length = 1046
Score = 28.3 bits (60), Expect = 6.5
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +1
Query: 268 YRQKQFSANLRHRNIKKQTVLSESPTQIIKTETVPSESSTKN 393
YR+ SA L +K S +P Q++ T +ES+TKN
Sbjct: 326 YRKLPKSAKLEQSGVKIFAYQSTNPLQVLGKFTAITESTTKN 367
>SB_34910| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2147
Score = 28.3 bits (60), Expect = 6.5
Identities = 33/141 (23%), Positives = 61/141 (43%)
Frame = +1
Query: 172 TTVTYRSRDPRKWRVDSASRDGVLK*I*RMAIYRQKQFSANLRHRNIKKQTVLSESPTQI 351
T+ T SR + V SR + + + + Q SA + + +V ESP+
Sbjct: 1193 TSATQESRSSQVTSVTQESRSSQVTSVTQESRSSQVT-SATQEPPSTQATSVTQESPSTQ 1251
Query: 352 IKTETVPSESSTKNHQQDRNSYQQFSNSTVIRKPPVNQTVTCETSLQKPKPIEETAVFYQ 531
+ + T S SS + Y Q ++V ++PP Q VT T Q+ + + T+V +
Sbjct: 1252 VTSATQESPSSQVTSATQESRYSQV--TSVTQEPPSTQ-VTSAT--QESRSSQVTSVTQE 1306
Query: 532 RTNRQQKTLLHDSETAIQTGS 594
+ Q + +S ++ T +
Sbjct: 1307 SRSSQVTSATQESPSSQVTSA 1327
>SB_17276| Best HMM Match : E-MAP-115 (HMM E-Value=0.57)
Length = 618
Score = 28.3 bits (60), Expect = 6.5
Identities = 18/92 (19%), Positives = 40/92 (43%), Gaps = 1/92 (1%)
Frame = +1
Query: 313 KKQTVLSESPTQIIKTETVPSESSTKNHQQDRNSYQQFSNSTVIRKPPVNQTVTCETSLQ 492
K+Q + ++ + + + + +N QQD N +Q +N + + ++ T + Q
Sbjct: 276 KRQEPAHQQDLEVQEAQQNVDDLTRQNRQQDVNIDEQDNNENALLEQKMSDKATMRITCQ 335
Query: 493 KPKPIEETA-VFYQRTNRQQKTLLHDSETAIQ 585
+ EE QR R+++ H + +Q
Sbjct: 336 QNMSAEEPEDKKMQRQTRKRQEPPHQQDVEVQ 367
>SB_8541| Best HMM Match : Vicilin_N (HMM E-Value=1.7)
Length = 165
Score = 28.3 bits (60), Expect = 6.5
Identities = 18/92 (19%), Positives = 40/92 (43%), Gaps = 1/92 (1%)
Frame = +1
Query: 313 KKQTVLSESPTQIIKTETVPSESSTKNHQQDRNSYQQFSNSTVIRKPPVNQTVTCETSLQ 492
K+Q + ++ + + + + +N QQD N +Q +N + + ++ T + Q
Sbjct: 17 KRQEPAHQQDLEVQEAQQNVDDLTRQNRQQDVNIDEQDNNENALLEQKMSDKATMRITCQ 76
Query: 493 KPKPIEETA-VFYQRTNRQQKTLLHDSETAIQ 585
+ EE QR R+++ H + +Q
Sbjct: 77 QNMSAEEPEDKKMQRQTRKRQEPPHQQDVEVQ 108
>SB_4115| Best HMM Match : Homeobox (HMM E-Value=9.4e-08)
Length = 267
Score = 28.3 bits (60), Expect = 6.5
Identities = 23/108 (21%), Positives = 49/108 (45%), Gaps = 4/108 (3%)
Frame = +1
Query: 145 NRNDLWSAFTTVTYRSRDPRKWRVDSASRDGVLK*I*RMAIYRQKQFSANLRHRNIKKQT 324
NRN L+ ++ + ++W A R+ + + + ++Y+ S N +
Sbjct: 110 NRNKLFITMLRDIRKADERQRWAHKRALRESLDQSVTATSLYQPFGTSLNQSLAATSLEA 169
Query: 325 VLSES----PTQIIKTETVPSESSTKNHQQDRNSYQQFSNSTVIRKPP 456
LS+S P T+++PS + ++H +D QQF++ + + P
Sbjct: 170 SLSQSVTATPLYQPLTQSLPSNNLHQSHHEDSFLDQQFADQSPWQPTP 217
>SB_47990| Best HMM Match : RRM_1 (HMM E-Value=7.8e-28)
Length = 440
Score = 27.9 bits (59), Expect = 8.6
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +2
Query: 464 RQLPVKPRYRSRNPSKKQPSSTSAQTDSKKHYYTTRKQPYRPGR 595
R++ PR RSR P K+ S +K +T +K+ P R
Sbjct: 205 RKMLRSPRKRSRTPRKRSRSPRKRSRSPRKGSHTPKKRSRSPRR 248
>SB_25899| Best HMM Match : Ribonuc_2-5A (HMM E-Value=0)
Length = 603
Score = 27.9 bits (59), Expect = 8.6
Identities = 13/47 (27%), Positives = 21/47 (44%)
Frame = +2
Query: 413 VTSSSPIVQLSENHQ*TRQLPVKPRYRSRNPSKKQPSSTSAQTDSKK 553
V SP+V+L H + +P + + NP+ T Q D+ K
Sbjct: 72 VEEGSPLVELQMTHIPDKLMPFYMNHHTHNPNNSPTPPTPKQIDNAK 118
>SB_31408| Best HMM Match : ENTH (HMM E-Value=0)
Length = 1080
Score = 27.9 bits (59), Expect = 8.6
Identities = 17/60 (28%), Positives = 25/60 (41%), Gaps = 3/60 (5%)
Frame = +1
Query: 292 NLRHRN---IKKQTVLSESPTQIIKTETVPSESSTKNHQQDRNSYQQFSNSTVIRKPPVN 462
N++ RN K T S SP I + VP+ + K Q N Q +++ P N
Sbjct: 917 NMKQRNDIVSSKSTTWSNSPVNINLDDLVPTLNREKPQQPSMNQLQSQQPGSIMMASPYN 976
>SB_24848| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1506
Score = 27.9 bits (59), Expect = 8.6
Identities = 14/50 (28%), Positives = 21/50 (42%)
Frame = +2
Query: 395 ISKTETVTSSSPIVQLSENHQ*TRQLPVKPRYRSRNPSKKQPSSTSAQTD 544
+ +T+T T P+ LS N L R R+ P KK + S +
Sbjct: 342 LERTQTQTQRVPVTSLSPNKSLFEHLRTNFRNRAEQPDKKSTGTGSGSIE 391
>SB_6746| Best HMM Match : rve (HMM E-Value=2.4)
Length = 488
Score = 27.9 bits (59), Expect = 8.6
Identities = 23/77 (29%), Positives = 35/77 (45%)
Frame = +1
Query: 313 KKQTVLSESPTQIIKTETVPSESSTKNHQQDRNSYQQFSNSTVIRKPPVNQTVTCETSLQ 492
K QT ++PT K +T + ++ NHQ +N Q ++ T + P NQ +T Q
Sbjct: 346 KNQT--GKNPTNQAKNQTGQNSTNQANHQTGQNPTNQANHQT--GQNPTNQAKN-QTG-Q 399
Query: 493 KPKPIEETAVFYQRTNR 543
P E RTN+
Sbjct: 400 NPTNQAENQTGQNRTNQ 416
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,268,718
Number of Sequences: 59808
Number of extensions: 451846
Number of successful extensions: 2092
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 1810
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2079
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1877743452
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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