Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30681
(710 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z77131-7|CAB00857.2| 1034|Caenorhabditis elegans Hypothetical pr... 31 0.61
Z46381-11|CAA86520.2| 1034|Caenorhabditis elegans Hypothetical p... 31 0.61
AC084158-36|AAK68577.1| 1219|Caenorhabditis elegans Hypothetical... 31 0.61
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 31 1.1
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 31 1.1
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 31 1.1
U80451-7|AAB37841.3| 277|Caenorhabditis elegans Collagen protei... 30 1.9
AF045642-10|AAC02587.1| 459|Caenorhabditis elegans Hypothetical... 29 2.5
Z81589-3|CAB04719.1| 256|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z81486-13|CAE47465.1| 611|Caenorhabditis elegans Hypothetical p... 29 3.3
Z81486-12|CAC42272.1| 585|Caenorhabditis elegans Hypothetical p... 29 3.3
AY221631-1|AAP97492.1| 611|Caenorhabditis elegans muscarinic ac... 29 3.3
AL034391-3|CAE47471.1| 611|Caenorhabditis elegans Hypothetical ... 29 3.3
AL034391-2|CAA22301.2| 585|Caenorhabditis elegans Hypothetical ... 29 3.3
AF139093-1|AAD48771.1| 585|Caenorhabditis elegans muscarinic ac... 29 3.3
AF039042-7|AAC48250.1| 336|Caenorhabditis elegans Seven tm rece... 29 3.3
Z81074-3|CAB03039.2| 352|Caenorhabditis elegans Hypothetical pr... 29 4.3
AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical ... 29 4.3
AC024755-2|AAL65800.1| 498|Caenorhabditis elegans Hypothetical ... 29 4.3
Z98261-1|CAB10931.1| 920|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z71266-11|CAA95847.1| 920|Caenorhabditis elegans Hypothetical p... 28 5.7
Z71258-16|CAA95786.1| 920|Caenorhabditis elegans Hypothetical p... 28 5.7
Z46795-7|CAO82048.1| 2371|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z46795-5|CAA86789.5| 2393|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z46795-4|CAM82783.2| 2184|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z46795-3|CAM82782.2| 2491|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z46792-9|CAO82020.1| 2371|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z46792-7|CAA86769.5| 2393|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z46792-6|CAM82812.2| 2184|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z46792-5|CAM82811.2| 2491|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z46792-2|CAL44970.3| 2202|Caenorhabditis elegans Hypothetical pr... 28 5.7
U53332-2|AAK31532.1| 473|Caenorhabditis elegans Tetraspanin fam... 28 5.7
U41534-1|AAB47593.3| 1437|Caenorhabditis elegans Temporarily ass... 28 5.7
DQ823041-1|ABH03415.1| 2166|Caenorhabditis elegans MPZ-1 protein. 28 5.7
DQ178635-1|ABD75714.1| 361|Caenorhabditis elegans tetraspanin f... 28 5.7
AF408763-1|AAO27842.1| 459|Caenorhabditis elegans unknown prote... 28 5.7
AC006680-9|AAK72299.1| 353|Caenorhabditis elegans Hypothetical ... 28 5.7
Z82089-4|CAB54513.2| 4648|Caenorhabditis elegans Hypothetical pr... 28 7.6
Z81499-6|CAB54224.2| 4648|Caenorhabditis elegans Hypothetical pr... 28 7.6
Z81037-1|CAB02745.1| 819|Caenorhabditis elegans Hypothetical pr... 28 7.6
U18384-1|AAA62504.1| 293|Caenorhabditis elegans collagen protein. 28 7.6
>Z77131-7|CAB00857.2| 1034|Caenorhabditis elegans Hypothetical
protein M01F1.7 protein.
Length = 1034
Score = 31.5 bits (68), Expect = 0.61
Identities = 20/75 (26%), Positives = 30/75 (40%)
Frame = +1
Query: 277 KQFSANLRHRNIKKQTVLSESPTQIIKTETVPSESSTKNHQQDRNSYQQFSNSTVIRKPP 456
K+ S+NL R IK+ +S T I T+T S + H Q + N R+
Sbjct: 476 KRLSSNLSSRIIKEDQSPHQSMTDITITDTSSISSCPQQHNQSVRDHSSLQNGHASRRSA 535
Query: 457 VNQTVTCETSLQKPK 501
N + S + K
Sbjct: 536 RNYSAPPSASYVRKK 550
>Z46381-11|CAA86520.2| 1034|Caenorhabditis elegans Hypothetical
protein M01F1.7 protein.
Length = 1034
Score = 31.5 bits (68), Expect = 0.61
Identities = 20/75 (26%), Positives = 30/75 (40%)
Frame = +1
Query: 277 KQFSANLRHRNIKKQTVLSESPTQIIKTETVPSESSTKNHQQDRNSYQQFSNSTVIRKPP 456
K+ S+NL R IK+ +S T I T+T S + H Q + N R+
Sbjct: 476 KRLSSNLSSRIIKEDQSPHQSMTDITITDTSSISSCPQQHNQSVRDHSSLQNGHASRRSA 535
Query: 457 VNQTVTCETSLQKPK 501
N + S + K
Sbjct: 536 RNYSAPPSASYVRKK 550
>AC084158-36|AAK68577.1| 1219|Caenorhabditis elegans Hypothetical
protein Y69A2AR.31 protein.
Length = 1219
Score = 31.5 bits (68), Expect = 0.61
Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 5/69 (7%)
Frame = +1
Query: 313 KKQTVLSESPTQIIKTETV---PSESSTKNHQQDRNSYQQF--SNSTVIRKPPVNQTVTC 477
KK+T + + + I +ET+ P++ Q D + S+ TV RKP TVT
Sbjct: 859 KKETQTTVADRKSINSETIDNLPTDDENNEEQMDEEPMTEIKKSSDTVQRKPKFRTTVTP 918
Query: 478 ETSLQKPKP 504
+ + P P
Sbjct: 919 PITSEAPPP 927
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 30.7 bits (66), Expect = 1.1
Identities = 21/84 (25%), Positives = 37/84 (44%), Gaps = 2/84 (2%)
Frame = +1
Query: 307 NIKKQTVLSESPTQIIKTETVPSESSTKNHQQDRNSYQQFSNSTVI--RKPPVNQTVTCE 480
N+ K+ SE PT+ + E PSE + ++ + + + R PV T +
Sbjct: 3594 NVPKEAAPSE-PTKDVPKEAAPSEPIQEEVPKEATLSEPTQEQSEVSKRSEPVEPTQIQQ 3652
Query: 481 TSLQKPKPIEETAVFYQRTNRQQK 552
+ ++ P+EET +TN K
Sbjct: 3653 AASEEETPLEETNETVVQTNEDVK 3676
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 30.7 bits (66), Expect = 1.1
Identities = 21/84 (25%), Positives = 37/84 (44%), Gaps = 2/84 (2%)
Frame = +1
Query: 307 NIKKQTVLSESPTQIIKTETVPSESSTKNHQQDRNSYQQFSNSTVI--RKPPVNQTVTCE 480
N+ K+ SE PT+ + E PSE + ++ + + + R PV T +
Sbjct: 3594 NVPKEAAPSE-PTKDVPKEAAPSEPIQEEVPKEATLSEPTQEQSEVSKRSEPVEPTQIQQ 3652
Query: 481 TSLQKPKPIEETAVFYQRTNRQQK 552
+ ++ P+EET +TN K
Sbjct: 3653 AASEEETPLEETNETVVQTNEDVK 3676
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 30.7 bits (66), Expect = 1.1
Identities = 21/84 (25%), Positives = 37/84 (44%), Gaps = 2/84 (2%)
Frame = +1
Query: 307 NIKKQTVLSESPTQIIKTETVPSESSTKNHQQDRNSYQQFSNSTVI--RKPPVNQTVTCE 480
N+ K+ SE PT+ + E PSE + ++ + + + R PV T +
Sbjct: 3594 NVPKEAAPSE-PTKDVPKEAAPSEPIQEEVPKEATLSEPTQEQSEVSKRSEPVEPTQIQQ 3652
Query: 481 TSLQKPKPIEETAVFYQRTNRQQK 552
+ ++ P+EET +TN K
Sbjct: 3653 AASEEETPLEETNETVVQTNEDVK 3676
>U80451-7|AAB37841.3| 277|Caenorhabditis elegans Collagen protein
17 protein.
Length = 277
Score = 29.9 bits (64), Expect = 1.9
Identities = 26/113 (23%), Positives = 48/113 (42%), Gaps = 2/113 (1%)
Frame = +3
Query: 294 SPT*KHQETNSSQRISDT-DHQDRNSSQ*IFDKEPSARQKQLPAVLQ*YSYQKTTSEPDS 470
+P+ HQ T SQ + DHQD+ +Q D + K++ + Q+ P+S
Sbjct: 152 APSQPHQGTQDSQESQEPKDHQDQTDTQEALDHKDHQDHKEMLDKTELQETQEPQERPES 211
Query: 471 YL*NLATEAETHRRNSRLLPAHKQT-AKNIITRLGNSHTDRVVYNILFSKSVV 626
+ + LL K+ +K+++ LG S D +Y+ + V+
Sbjct: 212 QERTDPRDLAITAHHQELLQDIKRNFSKSLLLILGTSIND--IYHFILPLLVI 262
>AF045642-10|AAC02587.1| 459|Caenorhabditis elegans Hypothetical
protein C17H12.9 protein.
Length = 459
Score = 29.5 bits (63), Expect = 2.5
Identities = 12/53 (22%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +1
Query: 349 IIKTETVPSESSTKNHQQDRNSYQQFSNSTVIRK-PPVNQTVTCETSLQKPKP 504
+++TE S+ +++ R Y ++ T ++ PP++ + T +Q+P P
Sbjct: 60 VVQTERNLSKKGRTSNRNARQGYDNYATLTNLQPLPPISTVTSKSTKVQRPSP 112
>Z81589-3|CAB04719.1| 256|Caenorhabditis elegans Hypothetical
protein T08G5.7 protein.
Length = 256
Score = 29.1 bits (62), Expect = 3.3
Identities = 21/87 (24%), Positives = 34/87 (39%), Gaps = 1/87 (1%)
Frame = +1
Query: 367 VPSESSTKNHQQDRNSYQQFSNSTVIRKPPVNQTVTCETS-LQKPKPIEETAVFYQRTNR 543
+P+E KNH ++ + ST+ V+ +Q PK E++ V T R
Sbjct: 86 IPTEKGLKNHMNQKHRKKPIDPSTITLATTSPTMVSPPPKRIQLPKSTEKSLVSSVATVR 145
Query: 544 QQKTLLHDSETAIQTGSCTIFYFQRVL 624
Q T +CT F ++ L
Sbjct: 146 AQPTQKPGGRYKCPVENCTFFKTRKEL 172
>Z81486-13|CAE47465.1| 611|Caenorhabditis elegans Hypothetical
protein Y40H4A.1b protein.
Length = 611
Score = 29.1 bits (62), Expect = 3.3
Identities = 25/107 (23%), Positives = 48/107 (44%), Gaps = 6/107 (5%)
Frame = +2
Query: 296 SDIETSRNKQFSANLRHRSSRQKQFPVNLRQRTISKTETVT------SSSPIVQLSENHQ 457
++ E A++R+ S+R + P + + S T TV S P V+LS
Sbjct: 398 TNFEDEEQTDAGASMRNGSARFRSRPSDTGKNNNSDTYTVLIELNDEGSRPSVRLSSCEP 457
Query: 458 *TRQLPVKPRYRSRNPSKKQPSSTSAQTDSKKHYYTTRKQPYRPGRV 598
+ P+ R RS+ S +++ D ++H ++ P++ GR+
Sbjct: 458 YLDE-PISTRNRSK-------SDCNSEIDERRHSLLNKQSPFKNGRI 496
>Z81486-12|CAC42272.1| 585|Caenorhabditis elegans Hypothetical
protein Y40H4A.1a protein.
Length = 585
Score = 29.1 bits (62), Expect = 3.3
Identities = 25/107 (23%), Positives = 48/107 (44%), Gaps = 6/107 (5%)
Frame = +2
Query: 296 SDIETSRNKQFSANLRHRSSRQKQFPVNLRQRTISKTETVT------SSSPIVQLSENHQ 457
++ E A++R+ S+R + P + + S T TV S P V+LS
Sbjct: 372 TNFEDEEQTDAGASMRNGSARFRSRPSDTGKNNNSDTYTVLIELNDEGSRPSVRLSSCEP 431
Query: 458 *TRQLPVKPRYRSRNPSKKQPSSTSAQTDSKKHYYTTRKQPYRPGRV 598
+ P+ R RS+ S +++ D ++H ++ P++ GR+
Sbjct: 432 YLDE-PISTRNRSK-------SDCNSEIDERRHSLLNKQSPFKNGRI 470
>AY221631-1|AAP97492.1| 611|Caenorhabditis elegans muscarinic
acetylcholine receptorlarge isoform protein.
Length = 611
Score = 29.1 bits (62), Expect = 3.3
Identities = 25/107 (23%), Positives = 48/107 (44%), Gaps = 6/107 (5%)
Frame = +2
Query: 296 SDIETSRNKQFSANLRHRSSRQKQFPVNLRQRTISKTETVT------SSSPIVQLSENHQ 457
++ E A++R+ S+R + P + + S T TV S P V+LS
Sbjct: 398 TNFEDEEQTDAGASMRNGSARFRSRPSDTGKNNNSDTYTVLIELNDEGSRPSVRLSSCEP 457
Query: 458 *TRQLPVKPRYRSRNPSKKQPSSTSAQTDSKKHYYTTRKQPYRPGRV 598
+ P+ R RS+ S +++ D ++H ++ P++ GR+
Sbjct: 458 YLDE-PISTRNRSK-------SDCNSEIDERRHSLLNKQSPFKNGRI 496
>AL034391-3|CAE47471.1| 611|Caenorhabditis elegans Hypothetical
protein Y40H4A.1b protein.
Length = 611
Score = 29.1 bits (62), Expect = 3.3
Identities = 25/107 (23%), Positives = 48/107 (44%), Gaps = 6/107 (5%)
Frame = +2
Query: 296 SDIETSRNKQFSANLRHRSSRQKQFPVNLRQRTISKTETVT------SSSPIVQLSENHQ 457
++ E A++R+ S+R + P + + S T TV S P V+LS
Sbjct: 398 TNFEDEEQTDAGASMRNGSARFRSRPSDTGKNNNSDTYTVLIELNDEGSRPSVRLSSCEP 457
Query: 458 *TRQLPVKPRYRSRNPSKKQPSSTSAQTDSKKHYYTTRKQPYRPGRV 598
+ P+ R RS+ S +++ D ++H ++ P++ GR+
Sbjct: 458 YLDE-PISTRNRSK-------SDCNSEIDERRHSLLNKQSPFKNGRI 496
>AL034391-2|CAA22301.2| 585|Caenorhabditis elegans Hypothetical
protein Y40H4A.1a protein.
Length = 585
Score = 29.1 bits (62), Expect = 3.3
Identities = 25/107 (23%), Positives = 48/107 (44%), Gaps = 6/107 (5%)
Frame = +2
Query: 296 SDIETSRNKQFSANLRHRSSRQKQFPVNLRQRTISKTETVT------SSSPIVQLSENHQ 457
++ E A++R+ S+R + P + + S T TV S P V+LS
Sbjct: 372 TNFEDEEQTDAGASMRNGSARFRSRPSDTGKNNNSDTYTVLIELNDEGSRPSVRLSSCEP 431
Query: 458 *TRQLPVKPRYRSRNPSKKQPSSTSAQTDSKKHYYTTRKQPYRPGRV 598
+ P+ R RS+ S +++ D ++H ++ P++ GR+
Sbjct: 432 YLDE-PISTRNRSK-------SDCNSEIDERRHSLLNKQSPFKNGRI 470
>AF139093-1|AAD48771.1| 585|Caenorhabditis elegans muscarinic
acetylcholine receptor protein.
Length = 585
Score = 29.1 bits (62), Expect = 3.3
Identities = 25/107 (23%), Positives = 48/107 (44%), Gaps = 6/107 (5%)
Frame = +2
Query: 296 SDIETSRNKQFSANLRHRSSRQKQFPVNLRQRTISKTETVT------SSSPIVQLSENHQ 457
++ E A++R+ S+R + P + + S T TV S P V+LS
Sbjct: 372 TNFEDEEQTDAGASMRNGSARFRSRPSDTGKNNNSDTYTVLIELNDEGSRPSVRLSSCEP 431
Query: 458 *TRQLPVKPRYRSRNPSKKQPSSTSAQTDSKKHYYTTRKQPYRPGRV 598
+ P+ R RS+ S +++ D ++H ++ P++ GR+
Sbjct: 432 YLDE-PISTRNRSK-------SDCNSEIDERRHSLLNKQSPFKNGRI 470
>AF039042-7|AAC48250.1| 336|Caenorhabditis elegans Seven tm
receptor protein 160 protein.
Length = 336
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/65 (23%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Frame = -1
Query: 320 CFLMFLCRRFAENCFCL*MAILYIYFSTPSRDALSTRHFRGSLDLY---VTVVKALHKSF 150
C L+F+C F + F + + +Y YF+ + L ++F+G ++ ++++ + +S
Sbjct: 93 CLLVFICGSFGASLFAIAINFIYRYFALERKGRL--QYFKGKRLVHWISLSLLAGIIESL 150
Query: 149 LLVYL 135
L ++L
Sbjct: 151 LFLFL 155
>Z81074-3|CAB03039.2| 352|Caenorhabditis elegans Hypothetical
protein F32B6.3 protein.
Length = 352
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/69 (23%), Positives = 36/69 (52%)
Frame = +2
Query: 296 SDIETSRNKQFSANLRHRSSRQKQFPVNLRQRTISKTETVTSSSPIVQLSENHQ*TRQLP 475
+D+E RN+++ + +S++++ + Q + S+T+ +P+ SE + T
Sbjct: 34 ADLEMKRNQEYERKQQEIASKKRKVDDEILQESSSRTK----PAPVENESEIDEKTPMSE 89
Query: 476 VKPRYRSRN 502
++ R R RN
Sbjct: 90 IQTRLRQRN 98
>AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical
protein F39C12.1 protein.
Length = 5105
Score = 28.7 bits (61), Expect = 4.3
Identities = 30/129 (23%), Positives = 56/129 (43%), Gaps = 2/129 (1%)
Frame = +2
Query: 200 PESGASIARREMGY*NKYKGWPFIGKNSSQRISDIETSRNKQFSANLRHRSSRQKQFPV- 376
PE+G S +RE+ G P + K Q+ + + + + S +Q++ P+
Sbjct: 2299 PETG-SFVKREISV-----GKPALPKADVQKTLETVSLKRIDSQTEPKTESIKQRRHPIF 2352
Query: 377 -NLRQRTISKTETVTSSSPIVQLSENHQ*TRQLPVKPRYRSRNPSKKQPSSTSAQTDSKK 553
+L ++I+ + +V+ S + QLP K R + + SS S +D K
Sbjct: 2353 EHLEDKSINNFSQGIPAISVVEPS-----SCQLPRKSRQKEHKITTNSNSSNSIDSDGMK 2407
Query: 554 HYYTTRKQP 580
++ KQP
Sbjct: 2408 MDRSSSKQP 2416
>AC024755-2|AAL65800.1| 498|Caenorhabditis elegans Hypothetical
protein Y34B4A.10 protein.
Length = 498
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/57 (22%), Positives = 28/57 (49%)
Frame = +1
Query: 298 RHRNIKKQTVLSESPTQIIKTETVPSESSTKNHQQDRNSYQQFSNSTVIRKPPVNQT 468
+HR +KK T ++E+P ++ + +E +T++ + + V PP Q+
Sbjct: 253 KHRKLKKVTKVTEAPAEVTVPTEIVTEPTTESATTPTTTTTISTTPLVTTTPPTAQS 309
>Z98261-1|CAB10931.1| 920|Caenorhabditis elegans Hypothetical
protein C01H6.9 protein.
Length = 920
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/58 (29%), Positives = 29/58 (50%)
Frame = +1
Query: 316 KQTVLSESPTQIIKTETVPSESSTKNHQQDRNSYQQFSNSTVIRKPPVNQTVTCETSL 489
++T +SE+ +T P ES ++HQ + QQ S+S + N+ ETS+
Sbjct: 357 EETAISENRLSHSTLKTTPIESRNESHQNSKIMTQQVSDSEDVEDVTFNR--KAETSV 412
>Z71266-11|CAA95847.1| 920|Caenorhabditis elegans Hypothetical
protein C01H6.9 protein.
Length = 920
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/58 (29%), Positives = 29/58 (50%)
Frame = +1
Query: 316 KQTVLSESPTQIIKTETVPSESSTKNHQQDRNSYQQFSNSTVIRKPPVNQTVTCETSL 489
++T +SE+ +T P ES ++HQ + QQ S+S + N+ ETS+
Sbjct: 357 EETAISENRLSHSTLKTTPIESRNESHQNSKIMTQQVSDSEDVEDVTFNR--KAETSV 412
>Z71258-16|CAA95786.1| 920|Caenorhabditis elegans Hypothetical
protein C01H6.9 protein.
Length = 920
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/58 (29%), Positives = 29/58 (50%)
Frame = +1
Query: 316 KQTVLSESPTQIIKTETVPSESSTKNHQQDRNSYQQFSNSTVIRKPPVNQTVTCETSL 489
++T +SE+ +T P ES ++HQ + QQ S+S + N+ ETS+
Sbjct: 357 EETAISENRLSHSTLKTTPIESRNESHQNSKIMTQQVSDSEDVEDVTFNR--KAETSV 412
>Z46795-7|CAO82048.1| 2371|Caenorhabditis elegans Hypothetical protein
C52A11.4f protein.
Length = 2371
Score = 28.3 bits (60), Expect = 5.7
Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 8/91 (8%)
Frame = +1
Query: 331 SESPTQIIKTETVPSESSTKNHQQDRNSYQQFSNSTVIRKPPVNQTV--------TCETS 486
S +I K ++V E S ++ + R+ + ST+I+K P N+T + ET
Sbjct: 1655 SNDRKEIKKQKSVEREMSVESKKSVRSIKKHRQESTIIKKSPSNETAPLIVSDVSSSETH 1714
Query: 487 LQKPKPIEETAVFYQRTNRQQKTLLHDSETA 579
+P+ + + F R + L D ++A
Sbjct: 1715 EDEPQAMSPSTSFDTRDADAMRALGIDDDSA 1745
>Z46795-5|CAA86789.5| 2393|Caenorhabditis elegans Hypothetical protein
C52A11.4a protein.
Length = 2393
Score = 28.3 bits (60), Expect = 5.7
Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 8/91 (8%)
Frame = +1
Query: 331 SESPTQIIKTETVPSESSTKNHQQDRNSYQQFSNSTVIRKPPVNQTV--------TCETS 486
S +I K ++V E S ++ + R+ + ST+I+K P N+T + ET
Sbjct: 1677 SNDRKEIKKQKSVEREMSVESKKSVRSIKKHRQESTIIKKSPSNETAPLIVSDVSSSETH 1736
Query: 487 LQKPKPIEETAVFYQRTNRQQKTLLHDSETA 579
+P+ + + F R + L D ++A
Sbjct: 1737 EDEPQAMSPSTSFDTRDADAMRALGIDDDSA 1767
>Z46795-4|CAM82783.2| 2184|Caenorhabditis elegans Hypothetical protein
C52A11.4e protein.
Length = 2184
Score = 28.3 bits (60), Expect = 5.7
Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 8/91 (8%)
Frame = +1
Query: 331 SESPTQIIKTETVPSESSTKNHQQDRNSYQQFSNSTVIRKPPVNQTV--------TCETS 486
S +I K ++V E S ++ + R+ + ST+I+K P N+T + ET
Sbjct: 1468 SNDRKEIKKQKSVEREMSVESKKSVRSIKKHRQESTIIKKSPSNETAPLIVSDVSSSETH 1527
Query: 487 LQKPKPIEETAVFYQRTNRQQKTLLHDSETA 579
+P+ + + F R + L D ++A
Sbjct: 1528 EDEPQAMSPSTSFDTRDADAMRALGIDDDSA 1558
>Z46795-3|CAM82782.2| 2491|Caenorhabditis elegans Hypothetical protein
C52A11.4d protein.
Length = 2491
Score = 28.3 bits (60), Expect = 5.7
Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 8/91 (8%)
Frame = +1
Query: 331 SESPTQIIKTETVPSESSTKNHQQDRNSYQQFSNSTVIRKPPVNQTV--------TCETS 486
S +I K ++V E S ++ + R+ + ST+I+K P N+T + ET
Sbjct: 1775 SNDRKEIKKQKSVEREMSVESKKSVRSIKKHRQESTIIKKSPSNETAPLIVSDVSSSETH 1834
Query: 487 LQKPKPIEETAVFYQRTNRQQKTLLHDSETA 579
+P+ + + F R + L D ++A
Sbjct: 1835 EDEPQAMSPSTSFDTRDADAMRALGIDDDSA 1865
>Z46792-9|CAO82020.1| 2371|Caenorhabditis elegans Hypothetical protein
C52A11.4f protein.
Length = 2371
Score = 28.3 bits (60), Expect = 5.7
Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 8/91 (8%)
Frame = +1
Query: 331 SESPTQIIKTETVPSESSTKNHQQDRNSYQQFSNSTVIRKPPVNQTV--------TCETS 486
S +I K ++V E S ++ + R+ + ST+I+K P N+T + ET
Sbjct: 1655 SNDRKEIKKQKSVEREMSVESKKSVRSIKKHRQESTIIKKSPSNETAPLIVSDVSSSETH 1714
Query: 487 LQKPKPIEETAVFYQRTNRQQKTLLHDSETA 579
+P+ + + F R + L D ++A
Sbjct: 1715 EDEPQAMSPSTSFDTRDADAMRALGIDDDSA 1745
>Z46792-7|CAA86769.5| 2393|Caenorhabditis elegans Hypothetical protein
C52A11.4a protein.
Length = 2393
Score = 28.3 bits (60), Expect = 5.7
Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 8/91 (8%)
Frame = +1
Query: 331 SESPTQIIKTETVPSESSTKNHQQDRNSYQQFSNSTVIRKPPVNQTV--------TCETS 486
S +I K ++V E S ++ + R+ + ST+I+K P N+T + ET
Sbjct: 1677 SNDRKEIKKQKSVEREMSVESKKSVRSIKKHRQESTIIKKSPSNETAPLIVSDVSSSETH 1736
Query: 487 LQKPKPIEETAVFYQRTNRQQKTLLHDSETA 579
+P+ + + F R + L D ++A
Sbjct: 1737 EDEPQAMSPSTSFDTRDADAMRALGIDDDSA 1767
>Z46792-6|CAM82812.2| 2184|Caenorhabditis elegans Hypothetical protein
C52A11.4e protein.
Length = 2184
Score = 28.3 bits (60), Expect = 5.7
Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 8/91 (8%)
Frame = +1
Query: 331 SESPTQIIKTETVPSESSTKNHQQDRNSYQQFSNSTVIRKPPVNQTV--------TCETS 486
S +I K ++V E S ++ + R+ + ST+I+K P N+T + ET
Sbjct: 1468 SNDRKEIKKQKSVEREMSVESKKSVRSIKKHRQESTIIKKSPSNETAPLIVSDVSSSETH 1527
Query: 487 LQKPKPIEETAVFYQRTNRQQKTLLHDSETA 579
+P+ + + F R + L D ++A
Sbjct: 1528 EDEPQAMSPSTSFDTRDADAMRALGIDDDSA 1558
>Z46792-5|CAM82811.2| 2491|Caenorhabditis elegans Hypothetical protein
C52A11.4d protein.
Length = 2491
Score = 28.3 bits (60), Expect = 5.7
Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 8/91 (8%)
Frame = +1
Query: 331 SESPTQIIKTETVPSESSTKNHQQDRNSYQQFSNSTVIRKPPVNQTV--------TCETS 486
S +I K ++V E S ++ + R+ + ST+I+K P N+T + ET
Sbjct: 1775 SNDRKEIKKQKSVEREMSVESKKSVRSIKKHRQESTIIKKSPSNETAPLIVSDVSSSETH 1834
Query: 487 LQKPKPIEETAVFYQRTNRQQKTLLHDSETA 579
+P+ + + F R + L D ++A
Sbjct: 1835 EDEPQAMSPSTSFDTRDADAMRALGIDDDSA 1865
>Z46792-2|CAL44970.3| 2202|Caenorhabditis elegans Hypothetical protein
C52A11.4c protein.
Length = 2202
Score = 28.3 bits (60), Expect = 5.7
Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 8/91 (8%)
Frame = +1
Query: 331 SESPTQIIKTETVPSESSTKNHQQDRNSYQQFSNSTVIRKPPVNQTV--------TCETS 486
S +I K ++V E S ++ + R+ + ST+I+K P N+T + ET
Sbjct: 1486 SNDRKEIKKQKSVEREMSVESKKSVRSIKKHRQESTIIKKSPSNETAPLIVSDVSSSETH 1545
Query: 487 LQKPKPIEETAVFYQRTNRQQKTLLHDSETA 579
+P+ + + F R + L D ++A
Sbjct: 1546 EDEPQAMSPSTSFDTRDADAMRALGIDDDSA 1576
>U53332-2|AAK31532.1| 473|Caenorhabditis elegans Tetraspanin family
protein 18 protein.
Length = 473
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 3/64 (4%)
Frame = +1
Query: 331 SESPTQIIKTET---VPSESSTKNHQQDRNSYQQFSNSTVIRKPPVNQTVTCETSLQKPK 501
S+S ++ K T + E TKN Q R S + V+ KP T+ + P
Sbjct: 402 SDSNDKLTKKSTEHPMKKEKQTKNKVQLRKSTETKQKPNVVAKPQKKTDTKVNTAKKNPT 461
Query: 502 PIEE 513
P+++
Sbjct: 462 PVKK 465
>U41534-1|AAB47593.3| 1437|Caenorhabditis elegans Temporarily assigned
gene nameprotein 213 protein.
Length = 1437
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/61 (27%), Positives = 28/61 (45%)
Frame = +2
Query: 371 PVNLRQRTISKTETVTSSSPIVQLSENHQ*TRQLPVKPRYRSRNPSKKQPSSTSAQTDSK 550
PV+ + + SK TSS +V+ E HQ + K ++ K+ S+ +SK
Sbjct: 1188 PVDKKIKVDSKKNGTTSSEKVVKDDEVHQNGSETEKKATVDNKERKKRPGKSSHGSKESK 1247
Query: 551 K 553
K
Sbjct: 1248 K 1248
>DQ823041-1|ABH03415.1| 2166|Caenorhabditis elegans MPZ-1 protein.
Length = 2166
Score = 28.3 bits (60), Expect = 5.7
Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 8/91 (8%)
Frame = +1
Query: 331 SESPTQIIKTETVPSESSTKNHQQDRNSYQQFSNSTVIRKPPVNQTV--------TCETS 486
S +I K ++V E S ++ + R+ + ST+I+K P N+T + ET
Sbjct: 1446 SNDRKEIKKQKSVEREMSVESKKSVRSIKKHRQESTIIKKSPSNETAPLIVSDVSSSETH 1505
Query: 487 LQKPKPIEETAVFYQRTNRQQKTLLHDSETA 579
+P+ + + F R + L D ++A
Sbjct: 1506 EDEPQAMSPSTSFDTRDADAMRALGIDDDSA 1536
>DQ178635-1|ABD75714.1| 361|Caenorhabditis elegans tetraspanin
family protein protein.
Length = 361
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 3/64 (4%)
Frame = +1
Query: 331 SESPTQIIKTET---VPSESSTKNHQQDRNSYQQFSNSTVIRKPPVNQTVTCETSLQKPK 501
S+S ++ K T + E TKN Q R S + V+ KP T+ + P
Sbjct: 290 SDSNDKLTKKSTEHPMKKEKQTKNKVQLRKSTETKQKPNVVAKPQKKTDTKVNTAKKNPT 349
Query: 502 PIEE 513
P+++
Sbjct: 350 PVKK 353
>AF408763-1|AAO27842.1| 459|Caenorhabditis elegans unknown protein
protein.
Length = 459
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/58 (29%), Positives = 29/58 (50%)
Frame = +1
Query: 316 KQTVLSESPTQIIKTETVPSESSTKNHQQDRNSYQQFSNSTVIRKPPVNQTVTCETSL 489
++T +SE+ +T P ES ++HQ + QQ S+S + N+ ETS+
Sbjct: 50 EETAISENRLSHSTLKTTPIESRNESHQNSKIMTQQVSDSEDVEDVTFNR--KAETSV 105
>AC006680-9|AAK72299.1| 353|Caenorhabditis elegans Hypothetical
protein R13D7.2 protein.
Length = 353
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/53 (26%), Positives = 23/53 (43%)
Frame = +1
Query: 391 NHQQDRNSYQQFSNSTVIRKPPVNQTVTCETSLQKPKPIEETAVFYQRTNRQQ 549
N +YQ FS +R+ + +C + + +EETA+ Y T Q
Sbjct: 126 NSNNCSKAYQYFSKDLRVRREAYSSGESCIVDIAEAVCVEETALTYLNTKYDQ 178
>Z82089-4|CAB54513.2| 4648|Caenorhabditis elegans Hypothetical protein
ZK270.2d protein.
Length = 4648
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +1
Query: 454 PVNQTVTCETSLQKPKPIEETAVFYQRTNRQQKTLLHDSETA 579
P+N+ TS ++PK ++ T T QQ L D T+
Sbjct: 4355 PMNEVTVVVTSSERPKELKNTKEVRHETREQQFRLTGDGYTS 4396
>Z81499-6|CAB54224.2| 4648|Caenorhabditis elegans Hypothetical protein
ZK270.2d protein.
Length = 4648
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +1
Query: 454 PVNQTVTCETSLQKPKPIEETAVFYQRTNRQQKTLLHDSETA 579
P+N+ TS ++PK ++ T T QQ L D T+
Sbjct: 4355 PMNEVTVVVTSSERPKELKNTKEVRHETREQQFRLTGDGYTS 4396
>Z81037-1|CAB02745.1| 819|Caenorhabditis elegans Hypothetical
protein C17E4.2 protein.
Length = 819
Score = 27.9 bits (59), Expect = 7.6
Identities = 23/107 (21%), Positives = 52/107 (48%)
Frame = +1
Query: 196 DPRKWRVDSASRDGVLK*I*RMAIYRQKQFSANLRHRNIKKQTVLSESPTQIIKTETVPS 375
D K +D+ S ++ + ++ I +K+FS + ++ +Q S + + E V S
Sbjct: 567 DHSKLNLDADSVVKTMQDMMKLLIESEKKFSMVTKQLSMVQQNRESLNEKLTVARENVKS 626
Query: 376 ESSTKNHQQDRNSYQQFSNSTVIRKPPVNQTVTCETSLQKPKPIEET 516
E++ K+H + + Y++ + ++ + +T + L+ K EET
Sbjct: 627 EAAMKSHLEQK--YKRLT----LKMKNLEAAMTLKLELESLKVFEET 667
>U18384-1|AAA62504.1| 293|Caenorhabditis elegans collagen protein.
Length = 293
Score = 27.9 bits (59), Expect = 7.6
Identities = 16/60 (26%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +3
Query: 294 SPT*KHQETNSSQRISDT-DHQDRNSSQ*IFDKEPSARQKQLPAVLQ*YSYQKTTSEPDS 470
+P+ HQ T SQ + DHQD+ +Q D + Q+++ + Q+ P+S
Sbjct: 152 APSQPHQGTQDSQESQEPKDHQDQTDTQEALDHKDHQDQQEMLDKTELQETQEPQERPES 211
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,200,080
Number of Sequences: 27780
Number of extensions: 360170
Number of successful extensions: 1372
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 1277
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1370
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1655655746
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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