Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30680
(311 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q7ZTS3 Cluster: Cct7 protein; n=17; Deuterostomia|Rep: ... 39 0.025
UniRef50_Q99832 Cluster: T-complex protein 1 subunit eta; n=135;... 39 0.025
UniRef50_Q2NA70 Cluster: Putative uncharacterized protein; n=1; ... 34 0.54
UniRef50_Q12UN6 Cluster: Thermosome subunit, group II chaperonin... 34 0.54
UniRef50_Q14137 Cluster: Ribosome biogenesis protein BOP1; n=16;... 33 0.94
UniRef50_Q7SDI5 Cluster: Predicted protein; n=2; Sordariales|Rep... 33 1.2
UniRef50_Q4N0D4 Cluster: T-complex protein 1, eta subunit, putat... 33 1.6
UniRef50_Q2H2J7 Cluster: Putative uncharacterized protein; n=2; ... 32 2.9
UniRef50_Q4QB67 Cluster: Putative uncharacterized protein; n=3; ... 31 3.8
UniRef50_Q8QVL6 Cluster: ORF1; n=1; Torque teno virus|Rep: ORF1 ... 31 6.6
UniRef50_Q2H4R4 Cluster: Putative uncharacterized protein; n=1; ... 31 6.6
UniRef50_Q7F0Q3 Cluster: Putative uncharacterized protein P0038F... 30 8.7
>UniRef50_Q7ZTS3 Cluster: Cct7 protein; n=17; Deuterostomia|Rep:
Cct7 protein - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 422
Score = 38.7 bits (86), Expect = 0.025
Identities = 22/47 (46%), Positives = 29/47 (61%), Gaps = 4/47 (8%)
Frame = +3
Query: 3 LVKLNAVNTACKATAQILSVDETIKNVKSGEE----AQMPGRGMDRP 131
+V++NA+ A +A ILSVDETIKN +S + A GRG RP
Sbjct: 372 IVRINALTAASEAACLILSVDETIKNPRSSVDGPPAAAGRGRGRGRP 418
>UniRef50_Q99832 Cluster: T-complex protein 1 subunit eta; n=135;
Eukaryota|Rep: T-complex protein 1 subunit eta - Homo
sapiens (Human)
Length = 543
Score = 38.7 bits (86), Expect = 0.025
Identities = 21/46 (45%), Positives = 29/46 (63%), Gaps = 3/46 (6%)
Frame = +3
Query: 3 LVKLNAVNTACKATAQILSVDETIKNVKSGEEAQMP---GRGMDRP 131
+V++NA+ A +A I+SVDETIKN +S +A GRG RP
Sbjct: 497 MVRINALTAASEAACLIVSVDETIKNPRSTVDAPTAAGRGRGRGRP 542
>UniRef50_Q2NA70 Cluster: Putative uncharacterized protein; n=1;
Erythrobacter litoralis HTCC2594|Rep: Putative
uncharacterized protein - Erythrobacter litoralis
(strain HTCC2594)
Length = 210
Score = 34.3 bits (75), Expect = 0.54
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Frame = +1
Query: 67 RPSRMSRAVKRRRCLVAAWTALVWNRTRQWLITLLITDY--DHLKSLASTLSR 219
+P +M R+V+++R V AWTA + + Q + L+ DY D KS L++
Sbjct: 21 QPKKMERSVEKQREAVEAWTACIADENAQEVAATLMQDYREDGYKSAIQQLAQ 73
>UniRef50_Q12UN6 Cluster: Thermosome subunit, group II chaperonin;
n=1; Methanococcoides burtonii DSM 6242|Rep: Thermosome
subunit, group II chaperonin - Methanococcoides burtonii
(strain DSM 6242)
Length = 500
Score = 34.3 bits (75), Expect = 0.54
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +3
Query: 6 VKLNAVNTACKATAQILSVDETIKNVKSGEEAQMPGRGMDRPRME*DS 149
+K A+N A +AT IL +D+ + + S + PG D P ++ D+
Sbjct: 451 IKTQAINAAMEATVMILRIDDVVASKGSANQGMGPGGLPDMPDLDMDA 498
>UniRef50_Q14137 Cluster: Ribosome biogenesis protein BOP1; n=16;
Coelomata|Rep: Ribosome biogenesis protein BOP1 - Homo
sapiens (Human)
Length = 746
Score = 33.5 bits (73), Expect = 0.94
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Frame = +1
Query: 25 IPPARPPLRFYQWMRPSRMSRAV--KRRRCLVAAWTALVWNRTRQWLITLLITDYDHLKS 198
+PP PPL+ +W+ S R V + R C T + W+ +L +L T H +
Sbjct: 503 VPPEEPPLQPARWLEASEEERQVGLRLRICHGKPVTQVTWHGRGDYLAVVLATQ-GHTQV 561
Query: 199 LASTLSR 219
L LSR
Sbjct: 562 LIHQLSR 568
>UniRef50_Q7SDI5 Cluster: Predicted protein; n=2; Sordariales|Rep:
Predicted protein - Neurospora crassa
Length = 611
Score = 33.1 bits (72), Expect = 1.2
Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = +1
Query: 1 PSSSLTP*IPPARPPLR-FYQWMRPSRMSRAVKRRRCLVAAWTALVWNRTRQWLITLLIT 177
PS L PP R P + F ++RP R+ R + LV + AL W T ++ L
Sbjct: 55 PSPGLPSLSPPLRKPSKGFAGFVRPRRVVRYILYICGLVLIFYALKWLYTHSPVLPFLSR 114
Query: 178 DYDH 189
YDH
Sbjct: 115 PYDH 118
>UniRef50_Q4N0D4 Cluster: T-complex protein 1, eta subunit,
putative; n=2; Theileria|Rep: T-complex protein 1, eta
subunit, putative - Theileria parva
Length = 579
Score = 32.7 bits (71), Expect = 1.6
Identities = 14/26 (53%), Positives = 20/26 (76%)
Frame = +3
Query: 3 LVKLNAVNTACKATAQILSVDETIKN 80
LVK N++ +A +A +LSVDET+KN
Sbjct: 540 LVKKNSIYSATEAACLVLSVDETVKN 565
>UniRef50_Q2H2J7 Cluster: Putative uncharacterized protein; n=2;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 636
Score = 31.9 bits (69), Expect = 2.9
Identities = 17/40 (42%), Positives = 22/40 (55%)
Frame = +2
Query: 32 LQGHRSDSISG*DHQECQER*RGADAWSRHGPPSYGIGLD 151
LQ RS +I G D + +R RG WS+HG P+Y D
Sbjct: 478 LQYRRSAAIYG-DWIQSYQRRRGVIEWSKHGVPAYSYKFD 516
>UniRef50_Q4QB67 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 691
Score = 31.5 bits (68), Expect = 3.8
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = +1
Query: 1 PSSSLTP*IPPARPPLRFY 57
PSS LTP +PPA PPL Y
Sbjct: 207 PSSGLTPPLPPANPPLLTY 225
>UniRef50_Q8QVL6 Cluster: ORF1; n=1; Torque teno virus|Rep: ORF1 -
Torque teno virus
Length = 576
Score = 30.7 bits (66), Expect = 6.6
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +1
Query: 49 RFYQWMRPSRMSRAVKRRRCLVAAWTALVWNRTRQ 153
R+ +W RP R+ R+ +RR W W R R+
Sbjct: 4 RYRKWRRPRRLFRSRRRRGYARRRWRRRAWGRRRR 38
>UniRef50_Q2H4R4 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 526
Score = 30.7 bits (66), Expect = 6.6
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = +1
Query: 43 PLRFYQWMRPSRMSRAVKRRRCLVAAWTALVWNRTRQWLITL 168
P+ + W R RA RR+ +V WTALVW+ TR+ + L
Sbjct: 474 PVDVHAWER-----RAAGRRKEMVVGWTALVWS-TREGAVLL 509
>UniRef50_Q7F0Q3 Cluster: Putative uncharacterized protein
P0038F10.123; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
P0038F10.123 - Oryza sativa subsp. japonica (Rice)
Length = 153
Score = 30.3 bits (65), Expect = 8.7
Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 3/54 (5%)
Frame = +1
Query: 1 PSSSLTP*IPPARPPL---RFYQWMRPSRMSRAVKRRRCLVAAWTALVWNRTRQ 153
PSS L+P +PP PL R +W+R S +R R A W R RQ
Sbjct: 48 PSSPLSPPVPPL--PLFERRPSEWLRRPGGSSGARRERRRPAVWVRQAGGRVRQ 99
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 263,640,860
Number of Sequences: 1657284
Number of extensions: 4635091
Number of successful extensions: 10697
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 10513
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10693
length of database: 575,637,011
effective HSP length: 80
effective length of database: 443,054,291
effective search space used: 10190248693
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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