Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30680
         (311 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF067947-10|AAC19232.2|  535|Caenorhabditis elegans Hypothetical...    40   4e-04
Z68318-10|CAA92697.1|  529|Caenorhabditis elegans Hypothetical p...    28   1.2  
U25632-1|AAA93233.1|  529|Caenorhabditis elegans CCT-2 protein.        28   1.2  
AL031268-2|CAA20331.1|  529|Caenorhabditis elegans Hypothetical ...    28   1.2  
U42834-4|AAA83584.1| 2229|Caenorhabditis elegans Hypothetical pr...    27   2.1  
AF098989-1|AAK18955.1| 1219|Caenorhabditis elegans Defective spe...    27   2.8  
Z35602-2|CAA84671.3|  824|Caenorhabditis elegans Hypothetical pr...    26   4.8  

>AF067947-10|AAC19232.2|  535|Caenorhabditis elegans Hypothetical
           protein T10B5.5a protein.
          Length = 535

 Score = 39.9 bits (89), Expect = 4e-04
 Identities = 16/37 (43%), Positives = 25/37 (67%)
 Frame = +3

Query: 3   LVKLNAVNTACKATAQILSVDETIKNVKSGEEAQMPG 113
           +VK NA+  A +A   +LS+D+T+KNV++     MPG
Sbjct: 495 IVKRNAITAATEAACLVLSIDQTVKNVRTPSGGAMPG 531


>Z68318-10|CAA92697.1|  529|Caenorhabditis elegans Hypothetical
           protein T21B10.7 protein.
          Length = 529

 Score = 28.3 bits (60), Expect = 1.2
 Identities = 14/24 (58%), Positives = 18/24 (75%)
 Frame = +3

Query: 6   VKLNAVNTACKATAQILSVDETIK 77
           VKL  V++A +AT QIL VD+ IK
Sbjct: 493 VKLCMVSSAAEATEQILRVDDIIK 516


>U25632-1|AAA93233.1|  529|Caenorhabditis elegans CCT-2 protein.
          Length = 529

 Score = 28.3 bits (60), Expect = 1.2
 Identities = 14/24 (58%), Positives = 18/24 (75%)
 Frame = +3

Query: 6   VKLNAVNTACKATAQILSVDETIK 77
           VKL  V++A +AT QIL VD+ IK
Sbjct: 493 VKLCMVSSAAEATEQILRVDDIIK 516


>AL031268-2|CAA20331.1|  529|Caenorhabditis elegans Hypothetical
           protein T21B10.7 protein.
          Length = 529

 Score = 28.3 bits (60), Expect = 1.2
 Identities = 14/24 (58%), Positives = 18/24 (75%)
 Frame = +3

Query: 6   VKLNAVNTACKATAQILSVDETIK 77
           VKL  V++A +AT QIL VD+ IK
Sbjct: 493 VKLCMVSSAAEATEQILRVDDIIK 516


>U42834-4|AAA83584.1| 2229|Caenorhabditis elegans Hypothetical
           protein F28B4.3 protein.
          Length = 2229

 Score = 27.5 bits (58), Expect = 2.1
 Identities = 11/35 (31%), Positives = 21/35 (60%)
 Frame = +3

Query: 6   VKLNAVNTACKATAQILSVDETIKNVKSGEEAQMP 110
           + ++A N A  +   ++ VDET++N+K   E + P
Sbjct: 116 ISIDATNLANCSQTYVVVVDETMRNIKIEVETESP 150


>AF098989-1|AAK18955.1| 1219|Caenorhabditis elegans Defective
            spermatogenesis protein15 protein.
          Length = 1219

 Score = 27.1 bits (57), Expect = 2.8
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = +1

Query: 25   IPPARPPLRFYQWMRPSRMSRAVKR 99
            +PP R PL  Y   +PS  S  V R
Sbjct: 1085 VPPTRAPLTVYNQQKPSSSSMMVSR 1109


>Z35602-2|CAA84671.3|  824|Caenorhabditis elegans Hypothetical
           protein R13G10.2 protein.
          Length = 824

 Score = 26.2 bits (55), Expect = 4.8
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +3

Query: 6   VKLNAVNTACKATAQILSVDETIKNVKSGEE 98
           VK+N V  AC   A+ L   + IKN+   EE
Sbjct: 31  VKMNRVKRACAMAAESLKEAKRIKNMLMEEE 61


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,881,356
Number of Sequences: 27780
Number of extensions: 99898
Number of successful extensions: 219
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 217
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 219
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 344570176
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)