Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30678
         (647 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7YU13 Cluster: LD26355p; n=3; Diptera|Rep: LD26355p - ...    36   1.1  
UniRef50_UPI0000D55537 Cluster: PREDICTED: similar to CG16707-PC...    34   2.6  
UniRef50_Q6F794 Cluster: Putative uncharacterized protein; n=1; ...    34   2.6  
UniRef50_UPI00015BCE1D Cluster: UPI00015BCE1D related cluster; n...    33   4.5  
UniRef50_Q5ZJI5 Cluster: Putative uncharacterized protein; n=4; ...    33   6.0  
UniRef50_Q9X6G0 Cluster: Cation-transporting ATPase; n=5; Lactob...    33   6.0  
UniRef50_Q9VT37 Cluster: CG16707-PC, isoform C; n=6; Diptera|Rep...    33   6.0  
UniRef50_Q8ZZP6 Cluster: Conserved protein; n=1; Pyrobaculum aer...    33   6.0  
UniRef50_P15941 Cluster: Mucin-1 precursor; n=71; Eutheria|Rep: ...    33   6.0  
UniRef50_UPI0000EBD703 Cluster: PREDICTED: similar to Transmembr...    33   7.9  

>UniRef50_Q7YU13 Cluster: LD26355p; n=3; Diptera|Rep: LD26355p -
            Drosophila melanogaster (Fruit fly)
          Length = 1654

 Score = 35.5 bits (78), Expect = 1.1
 Identities = 18/39 (46%), Positives = 23/39 (58%)
 Frame = +1

Query: 106  LPAEQSGAQLGTTVPVPHDIPQAPGKPEENATAVQPTKQ 222
            +P  Q  AQL TTVP+P  + Q+P  P  N  AVQ  +Q
Sbjct: 1497 VPRRQKHAQLATTVPIPPSLAQSPRAP-SNLEAVQLQQQ 1534


>UniRef50_UPI0000D55537 Cluster: PREDICTED: similar to CG16707-PC,
           isoform C; n=1; Tribolium castaneum|Rep: PREDICTED:
           similar to CG16707-PC, isoform C - Tribolium castaneum
          Length = 189

 Score = 34.3 bits (75), Expect = 2.6
 Identities = 18/36 (50%), Positives = 22/36 (61%)
 Frame = +2

Query: 518 TPKSELAKSTEAPTHMEPTVQARAFDGPSFVGGIIL 625
           TP ++   +T APT        R FDGPSFVGGI+L
Sbjct: 132 TPTTKSPVTTAAPT----PANNRKFDGPSFVGGIVL 163


>UniRef50_Q6F794 Cluster: Putative uncharacterized protein; n=1;
           Acinetobacter sp. ADP1|Rep: Putative uncharacterized
           protein - Acinetobacter sp. (strain ADP1)
          Length = 131

 Score = 34.3 bits (75), Expect = 2.6
 Identities = 18/46 (39%), Positives = 21/46 (45%)
 Frame = +1

Query: 109 PAEQSGAQLGTTVPVPHDIPQAPGKPEENATAVQPTKQNTTSAVDT 246
           P   + A L    P  HD PQ P  P + A   QP  QN  +AV T
Sbjct: 77  PMAPADAPLAPPAPAAHDAPQPPHDPVQQAAPAQPQDQN-LNAVPT 121


>UniRef50_UPI00015BCE1D Cluster: UPI00015BCE1D related cluster; n=1;
           unknown|Rep: UPI00015BCE1D UniRef100 entry - unknown
          Length = 583

 Score = 33.5 bits (73), Expect = 4.5
 Identities = 16/40 (40%), Positives = 25/40 (62%)
 Frame = +1

Query: 115 EQSGAQLGTTVPVPHDIPQAPGKPEENATAVQPTKQNTTS 234
           +QSG+ +GT++   + IPQ P K  +  T  QPT  N+T+
Sbjct: 140 DQSGSVVGTSLQPIYIIPQQPPKATDLITYQQPTNLNSTA 179


>UniRef50_Q5ZJI5 Cluster: Putative uncharacterized protein; n=4;
           Gallus gallus|Rep: Putative uncharacterized protein -
           Gallus gallus (Chicken)
          Length = 192

 Score = 33.1 bits (72), Expect = 6.0
 Identities = 21/47 (44%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
 Frame = +2

Query: 497 SQKRDATTPKSELAKSTEAPTHMEPTVQARA--FDGPSFVGGIILTL 631
           S + + T   S+++ S    T    TV ARA  FD  SFVGGI+LTL
Sbjct: 115 SSQVNVTVTTSKISFSPVTATSKSETVIARASRFDVGSFVGGIVLTL 161


>UniRef50_Q9X6G0 Cluster: Cation-transporting ATPase; n=5;
           Lactobacillus|Rep: Cation-transporting ATPase -
           Lactobacillus plantarum
          Length = 758

 Score = 33.1 bits (72), Expect = 6.0
 Identities = 17/36 (47%), Positives = 23/36 (63%)
 Frame = -3

Query: 597 PSNALACTVGSMCVGASVDLASSDFGVVASLFWLQL 490
           PS A+  T+G  C+  ++ LASSD+GV A   WL L
Sbjct: 699 PSRAVGVTIGLNCL-LTIGLASSDWGVPAISGWLTL 733


>UniRef50_Q9VT37 Cluster: CG16707-PC, isoform C; n=6; Diptera|Rep:
           CG16707-PC, isoform C - Drosophila melanogaster (Fruit
           fly)
          Length = 183

 Score = 33.1 bits (72), Expect = 6.0
 Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 5/45 (11%)
 Frame = +2

Query: 512 ATTPKSELAKSTEAPTHMEPT-----VQARAFDGPSFVGGIILTL 631
           +TT  S  + +T  P H   T     V    FDG SF+GGI+LTL
Sbjct: 115 STTTPSPNSTTTTPPPHTSTTPAPKPVPCGHFDGSSFIGGIVLTL 159


>UniRef50_Q8ZZP6 Cluster: Conserved protein; n=1; Pyrobaculum
           aerophilum|Rep: Conserved protein - Pyrobaculum
           aerophilum
          Length = 299

 Score = 33.1 bits (72), Expect = 6.0
 Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
 Frame = +1

Query: 103 ALPAEQSGAQLG-TTVPVPHDIPQAPGKPEENATAVQPTKQNTTSAVDTKTEI 258
           A  A+ + AQ   TT P+P +   A  +P   ATA QP   NT++A   KT +
Sbjct: 160 ATTAQPAAAQTAATTTPLPEEKQTAAAQPVATATAAQP---NTSTAPSAKTPV 209


>UniRef50_P15941 Cluster: Mucin-1 precursor; n=71; Eutheria|Rep:
           Mucin-1 precursor - Homo sapiens (Human)
          Length = 1255

 Score = 33.1 bits (72), Expect = 6.0
 Identities = 18/40 (45%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
 Frame = +1

Query: 133 LGTTVPVPHDIPQAP-GKPEENATAVQPTKQNTTSAVDTK 249
           LG+T P  HD+  AP  KP   +TA  P     TSA DT+
Sbjct: 108 LGSTTPPAHDVTSAPDNKPAPGSTA--PPAHGVTSAPDTR 145


>UniRef50_UPI0000EBD703 Cluster: PREDICTED: similar to Transmembrane
           protein 123; n=3; Eutheria|Rep: PREDICTED: similar to
           Transmembrane protein 123 - Bos taurus
          Length = 299

 Score = 32.7 bits (71), Expect = 7.9
 Identities = 26/67 (38%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
 Frame = +2

Query: 437 NCTRTPDRSC*KK*NKLVN*SQKRDATTPKSELAKS--TEAPTHMEPTVQARAFDGPSFV 610
           N T T  RS  K  N   N SQ   +T P +  + S  T   T +    +   FD  SFV
Sbjct: 202 NMTSTTLRSTPKITNVSQNTSQVSVSTVPTAHNSSSSVTVTTTIISKENKGSKFDTGSFV 261

Query: 611 GGIILTL 631
           GGI+LTL
Sbjct: 262 GGIVLTL 268


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 532,508,201
Number of Sequences: 1657284
Number of extensions: 8614295
Number of successful extensions: 27828
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 26694
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27807
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48955894634
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)