Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30677
(656 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 138 7e-34
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 130 1e-31
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 116 2e-27
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 110 1e-25
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 82 6e-17
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 51 1e-07
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 42 1e-04
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 30 0.34
SPAC25B8.04c |||mitochondrial splicing suppressor |Schizosacchar... 29 0.78
SPAC22G7.06c |ura1||carbamoyl-phosphate synthase |Schizosaccharo... 27 3.1
SPAC823.11 |||sphingosine-1-phosphate phosphatase |Schizosacchar... 25 7.3
SPBC776.10c |cog6||Golgi transport complex peripheral subunit Co... 25 7.3
SPBC25H2.13c |cdc20|pol2|DNA polymerase epsilon catalytic subuni... 25 9.6
SPCC553.06 |||oligosaccharyltransferase subunit|Schizosaccharomy... 25 9.6
SPAC2F7.03c |pom1||DYRK family protein kinase Pom1|Schizosacchar... 25 9.6
SPBC15D4.10c |amo1||nuclear rim protein Amo1|Schizosaccharomyces... 25 9.6
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 138 bits (334), Expect = 7e-34
Identities = 63/87 (72%), Positives = 74/87 (85%)
Frame = +1
Query: 247 PQHTIFDAKRLIGRKFEDATVQADMKHWPFEVVSIGGKPKIKVAYKGEDKTFFPEEVSSM 426
P +TIFDAKRLIGRKF+D VQ+DMKHWPF+V+S GKP ++V YKGE KTF PEE+SSM
Sbjct: 61 PHNTIFDAKRLIGRKFDDPEVQSDMKHWPFKVISKDGKPVLQVEYKGETKTFTPEEISSM 120
Query: 427 VLTKMKETAEAYLGKTVQNAVITVPAY 507
VL KM+ETAEAYLG V +AV+TVPAY
Sbjct: 121 VLMKMRETAEAYLGGKVTDAVVTVPAY 147
Score = 112 bits (270), Expect = 4e-26
Identities = 51/59 (86%), Positives = 56/59 (94%)
Frame = +2
Query: 77 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPN 253
++GIDLGTTYSCVG F + +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP+
Sbjct: 4 SIGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPH 62
Score = 88.2 bits (209), Expect = 9e-19
Identities = 42/49 (85%), Positives = 44/49 (89%)
Frame = +3
Query: 510 NDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFD 656
NDSQRQATKDAG I+GLNVLRIINEPTAAAIAYGLD+ GE NVLIFD
Sbjct: 149 NDSQRQATKDAGLIAGLNVLRIINEPTAAAIAYGLDRSNQGESNVLIFD 197
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 130 bits (315), Expect = 1e-31
Identities = 59/87 (67%), Positives = 72/87 (82%)
Frame = +1
Query: 247 PQHTIFDAKRLIGRKFEDATVQADMKHWPFEVVSIGGKPKIKVAYKGEDKTFFPEEVSSM 426
P +TIFDAKRLIGR+F D VQ+DMKHWPF+V+ GKP I+V +KGE KTF PEE+SSM
Sbjct: 61 PHNTIFDAKRLIGRRFNDPEVQSDMKHWPFKVIEKDGKPLIQVEFKGETKTFTPEEISSM 120
Query: 427 VLTKMKETAEAYLGKTVQNAVITVPAY 507
VL KM+E+AEA+LG V +AV+TVPAY
Sbjct: 121 VLLKMRESAEAFLGGKVTDAVVTVPAY 147
Score = 112 bits (270), Expect = 4e-26
Identities = 51/59 (86%), Positives = 56/59 (94%)
Frame = +2
Query: 77 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPN 253
++GIDLGTTYSCVG F + +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP+
Sbjct: 4 SIGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPH 62
Score = 85.0 bits (201), Expect = 8e-18
Identities = 41/49 (83%), Positives = 43/49 (87%)
Frame = +3
Query: 510 NDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFD 656
NDSQRQATKDAG I+GLNVLRIINEPTAAAIAYGLD+ E NVLIFD
Sbjct: 149 NDSQRQATKDAGLIAGLNVLRIINEPTAAAIAYGLDRSNQHETNVLIFD 197
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 116 bits (280), Expect = 2e-27
Identities = 53/87 (60%), Positives = 67/87 (77%)
Frame = +1
Query: 247 PQHTIFDAKRLIGRKFEDATVQADMKHWPFEVVSIGGKPKIKVAYKGEDKTFFPEEVSSM 426
P++T+FDAKRLIGR++ED Q D+KHWPF+V+ G P I+V Y GE K F +E+S+M
Sbjct: 65 PRNTVFDAKRLIGRRYEDPETQKDIKHWPFKVIDNNGIPTIEVNYLGEKKQFTAQEISAM 124
Query: 427 VLTKMKETAEAYLGKTVQNAVITVPAY 507
VLTKMKE +EA L K V+ AVITVPAY
Sbjct: 125 VLTKMKEISEAKLNKRVEKAVITVPAY 151
Score = 100 bits (240), Expect = 2e-22
Identities = 47/63 (74%), Positives = 54/63 (85%), Gaps = 1/63 (1%)
Frame = +2
Query: 77 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP-N 253
A+GIDLGTTYSCV V++ VEII NDQG RTTPS+VAFT+TERL+GDAAKNQ AMNP N
Sbjct: 8 AIGIDLGTTYSCVAVWETANVEIIPNDQGARTTPSFVAFTETERLVGDAAKNQAAMNPRN 67
Query: 254 TQY 262
T +
Sbjct: 68 TVF 70
Score = 80.6 bits (190), Expect = 2e-16
Identities = 39/49 (79%), Positives = 42/49 (85%)
Frame = +3
Query: 510 NDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFD 656
+DSQR ATKDAG I+GLNVLRIINEPTAAAIAYGLD K +NVLIFD
Sbjct: 153 SDSQRAATKDAGAIAGLNVLRIINEPTAAAIAYGLDAKSDKPKNVLIFD 201
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 110 bits (265), Expect = 1e-25
Identities = 49/87 (56%), Positives = 69/87 (79%)
Frame = +1
Query: 247 PQHTIFDAKRLIGRKFEDATVQADMKHWPFEVVSIGGKPKIKVAYKGEDKTFFPEEVSSM 426
P++TIFD KRLIGRKF++ T+ D+K +PF +V+ +P ++V G+ K F PEE+S+M
Sbjct: 94 PENTIFDIKRLIGRKFDEKTMAKDIKSFPFHIVNDKNRPLVEVNVGGKKKKFTPEEISAM 153
Query: 427 VLTKMKETAEAYLGKTVQNAVITVPAY 507
+L+KMK+TAEAYLGK V +AV+TVPAY
Sbjct: 154 ILSKMKQTAEAYLGKPVTHAVVTVPAY 180
Score = 98.7 bits (235), Expect = 6e-22
Identities = 45/64 (70%), Positives = 54/64 (84%), Gaps = 1/64 (1%)
Frame = +2
Query: 80 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP-NT 256
+GIDLGTTYSCV V ++G+VEIIANDQGNR TPSYVAFT+ ERL+G+AAKNQ NP NT
Sbjct: 38 IGIDLGTTYSCVAVMKNGRVEIIANDQGNRITPSYVAFTEDERLVGEAAKNQAPSNPENT 97
Query: 257 QYSM 268
+ +
Sbjct: 98 IFDI 101
Score = 80.2 bits (189), Expect = 2e-16
Identities = 36/49 (73%), Positives = 46/49 (93%)
Frame = +3
Query: 510 NDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFD 656
ND+QRQATKDAGTI+GLNV+RI+NEPTAAAIAYGLDK T E++++++D
Sbjct: 182 NDAQRQATKDAGTIAGLNVIRIVNEPTAAAIAYGLDKTDT-EKHIVVYD 229
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 82.2 bits (194), Expect = 6e-17
Identities = 38/87 (43%), Positives = 56/87 (64%)
Frame = +1
Query: 247 PQHTIFDAKRLIGRKFEDATVQADMKHWPFEVVSIGGKPKIKVAYKGEDKTFFPEEVSSM 426
P++T F KRLIGR+F++ VQ D+K P+++V + KT+ P ++
Sbjct: 110 PENTFFATKRLIGRRFKEPEVQRDIKEVPYKIVEHSNGD---AWLEARGKTYSPSQIGGF 166
Query: 427 VLTKMKETAEAYLGKTVQNAVITVPAY 507
+L+KM+ETA YLGK V+NAV+TVPAY
Sbjct: 167 ILSKMRETASTYLGKDVKNAVVTVPAY 193
Score = 73.7 bits (173), Expect = 2e-14
Identities = 34/66 (51%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Frame = +2
Query: 68 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAM 244
K P +GIDLGTT SC+ + + ++IAN +G RTTPS VAFT D ERL+G +AK Q +
Sbjct: 49 KGPVIGIDLGTTTSCLAIMEGQTPKVIANAEGTRTTPSVVAFTKDGERLVGVSAKRQAVI 108
Query: 245 NPNTQY 262
NP +
Sbjct: 109 NPENTF 114
Score = 72.5 bits (170), Expect = 5e-14
Identities = 35/49 (71%), Positives = 41/49 (83%)
Frame = +3
Query: 510 NDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFD 656
NDSQRQATK AG I+GLNVLR++NEPTAAA+AYGLDKK + V +FD
Sbjct: 195 NDSQRQATKAAGAIAGLNVLRVVNEPTAAALAYGLDKK--NDAIVAVFD 241
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 51.2 bits (117), Expect = 1e-07
Identities = 21/61 (34%), Positives = 39/61 (63%)
Frame = +2
Query: 65 AKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAM 244
++ VGID G + + + V ++ +++I N+ NR+TPS V++ + R +G+AAK+ A
Sbjct: 3 SRTNVVGIDFGNSKTVIAVARNRAIDVIVNEVSNRSTPSLVSYGERSRFLGEAAKSAEAS 62
Query: 245 N 247
N
Sbjct: 63 N 63
Score = 43.6 bits (98), Expect = 3e-05
Identities = 25/87 (28%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Frame = +1
Query: 250 QHTIFDAKRLIGRKFEDATVQ-ADMKHWPFEVVSIGGKPKIKVAYKGEDKTFFPEEVSSM 426
++T+ KRL GR ++D ++ + ++ + G KV Y E+ F ++ +
Sbjct: 65 RNTVGSLKRLAGRTYDDPEIKDIESNFISAKLTEVDGFVGAKVQYLNEETAFSNIQLIAA 124
Query: 427 VLTKMKETAEAYLGKTVQNAVITVPAY 507
TK+K AEA L +V + VI++PA+
Sbjct: 125 YFTKIKAIAEAELIGSVSDVVISIPAW 151
Score = 41.1 bits (92), Expect = 1e-04
Identities = 18/36 (50%), Positives = 26/36 (72%)
Frame = +3
Query: 513 DSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDK 620
D QR+A +A I+GLN LR++N+ AAA+ YG+ K
Sbjct: 154 DIQRRALLEAANIAGLNPLRLMNDNAAAALTYGITK 189
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 41.5 bits (93), Expect = 1e-04
Identities = 17/56 (30%), Positives = 31/56 (55%)
Frame = +2
Query: 80 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMN 247
+GI G S + + GK +++AN++GNR PS +++ + G A+ Q+ N
Sbjct: 27 IGISFGNQNSSIAFNRDGKTDVLANEEGNRQIPSILSYHGDQEYHGVQARGQLVRN 82
Score = 32.3 bits (70), Expect = 0.063
Identities = 21/91 (23%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Frame = +1
Query: 253 HTIFDAKRLIGRKFEDATVQADMKHWPFEVVSIGGKPKIKVAYKGED------KTFFPEE 414
+++ + + L+G+ ++ T+ H+ V++ G+ K+ + ++ K E
Sbjct: 85 NSVTNFRDLLGKSHDELTLHHC--HYSANPVNVEGQIGFKITVQEDEESDPKEKILTAHE 142
Query: 415 VSSMVLTKMKETAEAYLGKTVQNAVITVPAY 507
S L ++ E+AE +LG V V++VP Y
Sbjct: 143 ASVRHLRRLTESAEDFLGTKVNGCVMSVPVY 173
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 29.9 bits (64), Expect = 0.34
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = +2
Query: 80 VGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNT 256
+ ID GT ++ + + G +EI+ R S VAF ER+ G A N P
Sbjct: 25 LAIDYGTEWTKAALIKPGIPLEIVLTKDTRRKEQSAVAFKGNERIFGVDASNLATRFP-- 82
Query: 257 QYSMPNV 277
+S+ NV
Sbjct: 83 AHSIRNV 89
>SPAC25B8.04c |||mitochondrial splicing suppressor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 378
Score = 28.7 bits (61), Expect = 0.78
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +3
Query: 72 HPQ*ESIWVPRTLALVSSSTGRWRSSPTTRAT 167
HP S W+P LVS+ W +SP+++ T
Sbjct: 283 HPLYSSSWIPTLHDLVSTRCSVWLTSPSSQRT 314
>SPAC22G7.06c |ura1||carbamoyl-phosphate synthase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2244
Score = 26.6 bits (56), Expect = 3.1
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +2
Query: 176 PSYVAFTDTERLIGDAAKNQVAMNPNTQYSMPNVSSDVSSKMLLC 310
P +A T ER++ AAK A+N Y++ ++ D K++ C
Sbjct: 1252 PQDLAPTTIERIVDAAAKIGEALNITGPYNIQFIAKDNEIKVIEC 1296
>SPAC823.11 |||sphingosine-1-phosphate phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 411
Score = 25.4 bits (53), Expect = 7.3
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = -1
Query: 158 GRWR*SPPSRAGRHQRKSTWYPDRFLLRVLLPFCI 54
G W SP S + H ++++ +F +RVL C+
Sbjct: 276 GTWFASPESLSHLHDNLNSYFLLKFFVRVLFGVCM 310
>SPBC776.10c |cog6||Golgi transport complex peripheral subunit Cog6
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 675
Score = 25.4 bits (53), Expect = 7.3
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +2
Query: 221 AAKNQVAMNPNTQYSMPNVSSDVSSKML 304
A K Q+ +NP + +PNV D + +L
Sbjct: 323 ARKRQIQLNPFPPWDVPNVLEDQMNSLL 350
>SPBC25H2.13c |cdc20|pol2|DNA polymerase epsilon catalytic subunit a
Pol2 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 2199
Score = 25.0 bits (52), Expect = 9.6
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +3
Query: 426 GAYENEGNCRSLSWQNCAECSYHGSRVLND 515
GAY N C +S N A CS S ++ND
Sbjct: 1689 GAYSNA--CVDISLSNLALCSILNSALIND 1716
>SPCC553.06 |||oligosaccharyltransferase subunit|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 271
Score = 25.0 bits (52), Expect = 9.6
Identities = 9/20 (45%), Positives = 16/20 (80%), Gaps = 1/20 (5%)
Frame = -3
Query: 306 SSIFELTSDETFGIEY-CVL 250
S+++ELT DET +++ C+L
Sbjct: 51 STVYELTGDETLNLKFTCIL 70
>SPAC2F7.03c |pom1||DYRK family protein kinase
Pom1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1087
Score = 25.0 bits (52), Expect = 9.6
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +1
Query: 58 QNGKSTRSRNRSGYHVLLRWCLPARE 135
+NGK T +R +S + W P++E
Sbjct: 477 RNGKKTPTRTKSRMQQFINWFKPSKE 502
>SPBC15D4.10c |amo1||nuclear rim protein Amo1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 475
Score = 25.0 bits (52), Expect = 9.6
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +2
Query: 245 NPNTQYSMPNVSSDVSSKMLLCKPT*STGLS 337
N NTQ+S+PN S V L +P G +
Sbjct: 327 NLNTQFSLPNNSQPVFGHTSLTQPVNPNGFT 357
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,843,424
Number of Sequences: 5004
Number of extensions: 61033
Number of successful extensions: 207
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 187
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 205
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 297805304
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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