Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30677
(656 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 137 8e-33
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 136 1e-32
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 130 1e-30
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 118 6e-27
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 74 1e-13
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 67 1e-11
SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049) 53 2e-07
SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07) 42 3e-04
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.017
SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) 31 0.83
SB_55989| Best HMM Match : zf-C2H2 (HMM E-Value=8e-08) 30 1.9
SB_7560| Best HMM Match : Metallothio_PEC (HMM E-Value=1.3) 29 2.5
SB_47707| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_9053| Best HMM Match : TIG (HMM E-Value=0) 29 4.4
SB_2235| Best HMM Match : Arf (HMM E-Value=3.1e-13) 29 4.4
SB_51671| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_37853| Best HMM Match : REJ (HMM E-Value=0.00025) 28 5.8
SB_28392| Best HMM Match : Exo_endo_phos (HMM E-Value=0.77) 28 7.7
SB_45916| Best HMM Match : Cadherin (HMM E-Value=0) 28 7.7
SB_30622| Best HMM Match : 7tm_1 (HMM E-Value=9.5e-14) 28 7.7
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 137 bits (331), Expect = 8e-33
Identities = 61/87 (70%), Positives = 73/87 (83%)
Frame = +1
Query: 247 PQHTIFDAKRLIGRKFEDATVQADMKHWPFEVVSIGGKPKIKVAYKGEDKTFFPEEVSSM 426
P++T+FDAKRLIGRKF+D V DM HWPF V+ G +PKI+V +KGE K+FFPEE+SSM
Sbjct: 63 PENTVFDAKRLIGRKFDDPVVARDMTHWPFHVIREGERPKIQVEFKGEKKSFFPEEISSM 122
Query: 427 VLTKMKETAEAYLGKTVQNAVITVPAY 507
VLTKMKETAEAYLG V +AV+TVPAY
Sbjct: 123 VLTKMKETAEAYLGAKVTDAVVTVPAY 149
Score = 132 bits (319), Expect = 2e-31
Identities = 63/68 (92%), Positives = 65/68 (95%), Gaps = 1/68 (1%)
Frame = +2
Query: 62 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 241
MAK PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF+DTERLIGDAAKNQVA
Sbjct: 1 MAKTPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFSDTERLIGDAAKNQVA 60
Query: 242 MNP-NTQY 262
MNP NT +
Sbjct: 61 MNPENTVF 68
Score = 87.8 bits (208), Expect = 7e-18
Identities = 43/49 (87%), Positives = 46/49 (93%)
Frame = +3
Query: 510 NDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFD 656
+DSQRQATKDAGTI+GLNVLRIINEPTAAAIAYGLDKK ERNVLI+D
Sbjct: 151 HDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGVERNVLIYD 199
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 136 bits (330), Expect = 1e-32
Identities = 63/87 (72%), Positives = 76/87 (87%)
Frame = +1
Query: 247 PQHTIFDAKRLIGRKFEDATVQADMKHWPFEVVSIGGKPKIKVAYKGEDKTFFPEEVSSM 426
P++TIFDAKRLIGR+++DATVQ+DMK WPF+++S KPKI+V YKGE KTF EE+SSM
Sbjct: 63 PENTIFDAKRLIGRRYDDATVQSDMKLWPFKIISDNNKPKIQVEYKGERKTFAAEEISSM 122
Query: 427 VLTKMKETAEAYLGKTVQNAVITVPAY 507
VL KMKETAEAYLG+ V +AVITVPAY
Sbjct: 123 VLGKMKETAEAYLGQKVTSAVITVPAY 149
Score = 127 bits (306), Expect = 9e-30
Identities = 57/63 (90%), Positives = 61/63 (96%)
Frame = +2
Query: 62 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 241
M KAPA+GIDLGTTYSCVGVFQ+GKVEIIANDQGNRTTPSYV FTDTERL+GDAAKNQVA
Sbjct: 1 MGKAPAIGIDLGTTYSCVGVFQNGKVEIIANDQGNRTTPSYVGFTDTERLVGDAAKNQVA 60
Query: 242 MNP 250
+NP
Sbjct: 61 LNP 63
Score = 91.1 bits (216), Expect = 7e-19
Identities = 42/49 (85%), Positives = 47/49 (95%)
Frame = +3
Query: 510 NDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFD 656
NDSQRQATKDAGTI+GLNVLR+INEPTAAA+AYGLDK +GE+NVLIFD
Sbjct: 151 NDSQRQATKDAGTIAGLNVLRVINEPTAAALAYGLDKSLSGEKNVLIFD 199
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 130 bits (314), Expect = 1e-30
Identities = 59/63 (93%), Positives = 61/63 (96%)
Frame = +2
Query: 62 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 241
M KAPA+GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTD ERL+GDAAKNQVA
Sbjct: 1 MTKAPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDEERLVGDAAKNQVA 60
Query: 242 MNP 250
MNP
Sbjct: 61 MNP 63
Score = 113 bits (271), Expect = 2e-25
Identities = 64/112 (57%), Positives = 73/112 (65%), Gaps = 25/112 (22%)
Frame = +1
Query: 247 PQHTIFDAKRLIGRKFEDATVQADMKHWPFEVVSIGGKPKIKVAYKGEDKTFFPEEV--- 417
P +TIFDAKRLIGR+F+D V+ DMKHW FEVV+ G+PK+KV YKGE KTFF EEV
Sbjct: 63 PTNTIFDAKRLIGRRFDDPGVKDDMKHWSFEVVNEAGRPKVKVEYKGETKTFFAEEVVNE 122
Query: 418 ----------------------SSMVLTKMKETAEAYLGKTVQNAVITVPAY 507
SSMVL KMKETAEAYLG V +AV+TVPAY
Sbjct: 123 AGRPKVKVEYKGETKTFFAEEISSMVLNKMKETAEAYLGCKVTDAVVTVPAY 174
Score = 90.6 bits (215), Expect = 1e-18
Identities = 45/49 (91%), Positives = 45/49 (91%)
Frame = +3
Query: 510 NDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFD 656
NDSQRQATKDAG ISGLNVLRIINEPTAAAIAYGLDKK ERNVLIFD
Sbjct: 244 NDSQRQATKDAGVISGLNVLRIINEPTAAAIAYGLDKKVGQERNVLIFD 292
Score = 52.0 bits (119), Expect = 4e-07
Identities = 24/32 (75%), Positives = 28/32 (87%)
Frame = +1
Query: 412 EVSSMVLTKMKETAEAYLGKTVQNAVITVPAY 507
++SSMVL KMKETAEAYLG V +AV+TVPAY
Sbjct: 211 QISSMVLNKMKETAEAYLGCKVTDAVVTVPAY 242
Score = 28.7 bits (61), Expect = 4.4
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +3
Query: 510 NDSQRQATKDAG 545
NDSQRQATKDAG
Sbjct: 176 NDSQRQATKDAG 187
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 118 bits (283), Expect = 6e-27
Identities = 55/87 (63%), Positives = 70/87 (80%)
Frame = +1
Query: 247 PQHTIFDAKRLIGRKFEDATVQADMKHWPFEVVSIGGKPKIKVAYKGEDKTFFPEEVSSM 426
P++T+FDAKRLIGR ++D +VQ D+K +PF+VV KP ++V K E KTF EE+S+M
Sbjct: 761 PENTVFDAKRLIGRSWDDTSVQNDLKFFPFKVVDKNKKPHVQVKVKDEIKTFAAEEISAM 820
Query: 427 VLTKMKETAEAYLGKTVQNAVITVPAY 507
VLTKMKETAEAYLGK V +AV+TVPAY
Sbjct: 821 VLTKMKETAEAYLGKKVTHAVVTVPAY 847
Score = 100 bits (239), Expect = 1e-21
Identities = 48/63 (76%), Positives = 55/63 (87%), Gaps = 2/63 (3%)
Frame = +2
Query: 80 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNP-N 253
+GIDLGTTYSCVGVF++G+VEIIANDQGNR TPSYVAFT+ ERLIGD AKNQ+ NP N
Sbjct: 704 IGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTEEGERLIGDGAKNQLTTNPEN 763
Query: 254 TQY 262
T +
Sbjct: 764 TVF 766
Score = 82.6 bits (195), Expect = 3e-16
Identities = 38/49 (77%), Positives = 45/49 (91%)
Frame = +3
Query: 510 NDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFD 656
ND+QRQATKDAG I+GL V+RIINEPTAAAIAYG+DKK GE+N+L+FD
Sbjct: 849 NDAQRQATKDAGAIAGLTVMRIINEPTAAAIAYGMDKK-EGEKNILVFD 896
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 73.7 bits (173), Expect = 1e-13
Identities = 37/87 (42%), Positives = 55/87 (63%), Gaps = 1/87 (1%)
Frame = +1
Query: 250 QHTIFDAKRLIGRKFEDATVQADMKHWPFEVVSIGGKP-KIKVAYKGEDKTFFPEEVSSM 426
++TI KR IGRKF D VQ ++ H P++VV + I+V Y G+ + F PE+V +M
Sbjct: 120 KNTISQFKRFIGRKFSDPAVQKEIPHLPYKVVELPNDSIGIQVQYLGKQEVFSPEQVMAM 179
Query: 427 VLTKMKETAEAYLGKTVQNAVITVPAY 507
+ T++K TAE L V + VI+VP+Y
Sbjct: 180 LFTRLKTTAEIALKTKVTDCVISVPSY 206
Score = 49.6 bits (113), Expect = 2e-06
Identities = 22/52 (42%), Positives = 33/52 (63%)
Frame = +2
Query: 80 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQ 235
VG D+G + V + G +E +AN+ +R TPS+V+ D +RLIG + KNQ
Sbjct: 4 VGFDVGNQSCYIAVARGGGIETVANEFSDRCTPSFVSLGDKQRLIGTSGKNQ 55
Score = 41.1 bits (92), Expect = 8e-04
Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
Frame = +3
Query: 513 DSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKG---TGERNVLIFD 656
D QR+ DA +GLN LR++N+ TA ++AYG+ K+ RNV+ D
Sbjct: 209 DRQRRCMLDASATAGLNCLRLMNDTTAVSLAYGIYKQDLPTDKPRNVVFVD 259
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 66.9 bits (156), Expect = 1e-11
Identities = 32/68 (47%), Positives = 46/68 (67%), Gaps = 3/68 (4%)
Frame = +2
Query: 68 KAPAVGIDLGTTYSCVGVFQ--HGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 241
K +GIDLGTTYSCVG +Q G+++I +++ ++ PS VAFTD L+G+ A +Q
Sbjct: 30 KPKIIGIDLGTTYSCVGAYQAISGRIDIFSDENDDKVVPSLVAFTDKGVLVGEKALSQAE 89
Query: 242 MNP-NTQY 262
+NP NT Y
Sbjct: 90 INPKNTIY 97
Score = 56.4 bits (130), Expect = 2e-08
Identities = 27/46 (58%), Positives = 35/46 (76%)
Frame = +3
Query: 519 QRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFD 656
QR AT A +++G+ VLR+INEPTAAA+AYGL KK G NV++ D
Sbjct: 184 QRNATVKAASLAGITVLRVINEPTAAALAYGLHKK-EGVANVMVVD 228
Score = 56.0 bits (129), Expect = 3e-08
Identities = 36/105 (34%), Positives = 53/105 (50%), Gaps = 1/105 (0%)
Frame = +1
Query: 247 PQHTIFDAKRLIGRKFEDATVQADMKHWPFEVVSIG-GKPKIKVAYKGEDKTFFPEEVSS 423
P++TI+DAKR IG+ F + K + F V + G V KG PEE+
Sbjct: 92 PKNTIYDAKRFIGKTFTKQELLEIGKLYQFRVTTDKRGNAGFLVGKKGNFTVITPEEIGG 151
Query: 424 MVLTKMKETAEAYLGKTVQNAVITVPAYSMTLKDKPQKMQVPSLA 558
V+ K++ AE L TV AV++VPA +K + ++ SLA
Sbjct: 152 YVIKKLRTMAERNLTTTVTKAVMSVPA-EFDIKQRNATVKAASLA 195
>SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049)
Length = 179
Score = 52.8 bits (121), Expect = 2e-07
Identities = 24/47 (51%), Positives = 36/47 (76%)
Frame = +1
Query: 367 IKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAY 507
I V GE ++F PE++S++VL ++K AEA+LG+ V+ AVITVPA+
Sbjct: 2 IAVEVCGEKRSFAPEQISAVVLEQLKADAEAFLGQAVKRAVITVPAH 48
Score = 52.8 bits (121), Expect = 2e-07
Identities = 38/70 (54%), Positives = 41/70 (58%), Gaps = 26/70 (37%)
Frame = +3
Query: 510 NDSQRQATKDAGTISGLNVL------------------------RIINEPTAAAIAYGLD 617
ND+QRQATKDAGTI+GL+VL RIINEPTAAAIAYGLD
Sbjct: 50 NDAQRQATKDAGTIAGLDVLSRTASERPPSRFRRRRPHGRSRVLRIINEPTAAAIAYGLD 109
Query: 618 KK--GTGERN 641
K G ERN
Sbjct: 110 KARGGKAERN 119
>SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07)
Length = 592
Score = 42.3 bits (95), Expect = 3e-04
Identities = 27/61 (44%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Frame = +2
Query: 131 GKVEIIANDQGNRTTPSYVAFTDTERLI--GDAAKNQVAMNP-NTQYSMPNVSSDVSSKM 301
G IIAND G+R TP+ VAF+DTE+LI +V N N Q S V + + KM
Sbjct: 83 GNTTIIANDAGDRVTPAMVAFSDTEKLIDKDGLPYYEVESNERNIQVSPKEVINMIYKKM 142
Query: 302 L 304
L
Sbjct: 143 L 143
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 36.7 bits (81), Expect = 0.017
Identities = 17/35 (48%), Positives = 24/35 (68%)
Frame = +3
Query: 510 NDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGL 614
N ++R+A A + GLNVL+I+N TA A+ YGL
Sbjct: 117 NQAERRALLRAAELVGLNVLQIMNSNTAVALNYGL 151
Score = 35.1 bits (77), Expect = 0.051
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = +1
Query: 361 PKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAY 507
P +K Y+ D TF PEE+ M+L + E + +++ V+TVP +
Sbjct: 68 PHVK-NYQQSDVTFTPEELMGMILNHSRFIGEQFADHPIKDVVLTVPPF 115
>SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)
Length = 212
Score = 31.1 bits (67), Expect = 0.83
Identities = 15/25 (60%), Positives = 20/25 (80%), Gaps = 1/25 (4%)
Frame = +2
Query: 140 EIIANDQGNRTTPSYVAFT-DTERL 211
++I N +G+RTTPS VAFT + ERL
Sbjct: 7 KVIENAEGSRTTPSVVAFTPEGERL 31
>SB_55989| Best HMM Match : zf-C2H2 (HMM E-Value=8e-08)
Length = 1011
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/62 (27%), Positives = 28/62 (45%)
Frame = +1
Query: 358 KPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYSMTLKDKPQK 537
+PK K + E+ EE +M ++K LGK V+ + T ++TL + Q
Sbjct: 654 QPKFKKTKEEEEFDKLLEEADAMTQQEVKNVKNIKLGKNVKTQLYTCEPCNITLNSQKQM 713
Query: 538 MQ 543
Q
Sbjct: 714 SQ 715
>SB_7560| Best HMM Match : Metallothio_PEC (HMM E-Value=1.3)
Length = 350
Score = 29.5 bits (63), Expect = 2.5
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = -1
Query: 248 GSSPPGSWRHLR*DARCL*TQHKTEWSCCPGRW 150
GS PPG W R +AR T +T +SC PG W
Sbjct: 206 GSCPPGFWCRKRREARAA-TDLET-YSCPPGFW 236
>SB_47707| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 627
Score = 29.1 bits (62), Expect = 3.3
Identities = 24/72 (33%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Frame = +3
Query: 426 GAYENEG-NCRSLSWQNCAECSYHGSRVLNDSQRQAT--KDAGTISGLNVLRIINEPTAA 596
GA +N + SL W C + YHG +V+ + A AG S NV+R + P A
Sbjct: 512 GATQNANESLNSLVWARCPKHKYHGYKVIRCAVAAAVCHFHAGASSRENVMRRLCVP-AG 570
Query: 597 AIAYGLDKKGTG 632
G K TG
Sbjct: 571 HTQEGHPSKRTG 582
>SB_9053| Best HMM Match : TIG (HMM E-Value=0)
Length = 2990
Score = 28.7 bits (61), Expect = 4.4
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2
Query: 8 HVC*VVLRTSNKTD*KYKMAKAPAVGIDL 94
HVC +V T K K ++K PA GI+L
Sbjct: 1200 HVCNIVSNTETKITCKLDVSKTPAPGIEL 1228
>SB_2235| Best HMM Match : Arf (HMM E-Value=3.1e-13)
Length = 334
Score = 28.7 bits (61), Expect = 4.4
Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Frame = +1
Query: 322 KHWPFEVVSIGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVP 501
K+ F V IGG+P ++ Y +DK+ V S + ++ E LG + ++ VP
Sbjct: 16 KNVHFAVWDIGGQPNLRKHYFTDDKSGLIYVVDSTDIQRLNEA--QLLGILQEKVMVDVP 73
Query: 502 AYSMTLK-DKPQKMQVPSLA 558
+ K D P ++ +A
Sbjct: 74 VVVVANKQDLPNVLKAGDIA 93
>SB_51671| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 665
Score = 28.3 bits (60), Expect = 5.8
Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = +1
Query: 49 LKIQNGKSTRSRN-RSGYHVLLRWCLPAREGGDHRQRPGQQDHSVLCCVHRHRASHRRCR 225
L++ N + ++ + R GY L R C R + +R + H++L R +RC
Sbjct: 225 LRLVNTRDDKTHDKRPGYRKLSRVC-GGRRPNEPYERTARV-HTILSTETETRFCAKRCA 282
Query: 226 QEPGGDEPQHTIFDA 270
G +P++T F+A
Sbjct: 283 GTASGMDPKNTPFNA 297
>SB_37853| Best HMM Match : REJ (HMM E-Value=0.00025)
Length = 2182
Score = 28.3 bits (60), Expect = 5.8
Identities = 15/33 (45%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = +3
Query: 480 ECSYHGSRVLNDSQRQATKDAG-TISGLNVLRI 575
ECS+ GS+V+N S+R DAG ++G++ RI
Sbjct: 678 ECSF-GSKVINSSKRITIYDAGFQVTGISPSRI 709
>SB_28392| Best HMM Match : Exo_endo_phos (HMM E-Value=0.77)
Length = 549
Score = 27.9 bits (59), Expect = 7.7
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = -1
Query: 617 VKTVSNRSSSRFIDDSENVQARDGTCIFCGLSLRVIEYAGTV 492
+K S R + VQ+ D CI+C L V+EYA V
Sbjct: 404 IKKASKRLYALRSLKKSGVQSNDLVCIYCVLIRAVLEYAAPV 445
>SB_45916| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 1774
Score = 27.9 bits (59), Expect = 7.7
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = -1
Query: 650 DKYISFSSTLFVKTVSNRSSSRFIDDSEN 564
+K ISF +LF+ VSN S+ R+I +E+
Sbjct: 752 NKVISFGPSLFMDKVSNASAGRYICIAES 780
>SB_30622| Best HMM Match : 7tm_1 (HMM E-Value=9.5e-14)
Length = 856
Score = 27.9 bits (59), Expect = 7.7
Identities = 17/60 (28%), Positives = 27/60 (45%)
Frame = -3
Query: 258 CVLGFIATWFLAASPMRRSVSVNAT*DGVVLLPWSLAMISTFPCWKTPTQEYVVPRSIPT 79
C+L I WF P+R S + VV+ S+ ++ F C P + P +IP+
Sbjct: 107 CLLLTIERWFAVVQPLRYQASFSKR--RVVVSLISVYCVACFLCCTLPFEVSFSPENIPS 164
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,179,644
Number of Sequences: 59808
Number of extensions: 512531
Number of successful extensions: 1514
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1412
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1506
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1681430875
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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