Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30676
         (683 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF364131-1|AAL35507.1|  378|Anopheles gambiae putative odorant r...    27   0.55 
AY659931-1|AAT51799.1|  167|Anopheles gambiae lysozyme i-1 protein.    25   2.9  
AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR prot...    24   5.1  

>AF364131-1|AAL35507.1|  378|Anopheles gambiae putative odorant
           receptor Or2 protein.
          Length = 378

 Score = 27.1 bits (57), Expect = 0.55
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +3

Query: 330 AQRPVLRRASRRQ*MLLQSKRRLLSADIGYSLLLRRV 440
           AQRP++ +      M L+  ++LL+    Y  LLRRV
Sbjct: 340 AQRPMVIKVGNVYPMTLEMFQKLLNVSYSYFTLLRRV 376


>AY659931-1|AAT51799.1|  167|Anopheles gambiae lysozyme i-1 protein.
          Length = 167

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = +3

Query: 552 DDQVNKGCNLCTCKVDNDNNAYWSCTQDTCMM 647
           +D V   C  C C+  +  +A   C+ D C M
Sbjct: 34  EDPVTDVCLSCICEASSGCDASLRCSGDVCGM 65


>AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR
           protein.
          Length = 460

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +1

Query: 517 YRANTSNRLMHRTIKLTKAAICV 585
           YR    NR++H  +K+TK  + V
Sbjct: 305 YRTAGENRMLHSQMKVTKMLLIV 327


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 708,534
Number of Sequences: 2352
Number of extensions: 16043
Number of successful extensions: 38
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68995575
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)