Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30676
         (683 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81070-2|CAB03007.1|  491|Caenorhabditis elegans Hypothetical pr...    68   5e-12
Z92809-3|CAB07269.1|  440|Caenorhabditis elegans Hypothetical pr...    33   0.14 
Z98877-16|CAH60800.1|  975|Caenorhabditis elegans Hypothetical p...    32   0.44 
Z81468-2|CAN99666.1|  950|Caenorhabditis elegans Hypothetical pr...    31   1.0  
Z81468-1|CAB03875.3| 1010|Caenorhabditis elegans Hypothetical pr...    31   1.0  
U28929-2|AAN63411.1|  306|Caenorhabditis elegans Hypothetical pr...    30   1.8  
U00066-2|AAA50741.2|  248|Caenorhabditis elegans Hypothetical pr...    29   3.1  
Z70757-1|CAA94805.1|  497|Caenorhabditis elegans Hypothetical pr...    28   5.4  
Z81111-2|CAB03266.1|  535|Caenorhabditis elegans Hypothetical pr...    28   7.1  
Z50029-1|CAA90340.2|  460|Caenorhabditis elegans Hypothetical pr...    28   7.1  
AF040661-12|AAG24221.1|  210|Caenorhabditis elegans Hypothetical...    28   7.1  
Z69385-3|CAA93426.2| 1477|Caenorhabditis elegans Hypothetical pr...    27   9.4  
U41018-2|AAA82325.2|  260|Caenorhabditis elegans Hypothetical pr...    27   9.4  

>Z81070-2|CAB03007.1|  491|Caenorhabditis elegans Hypothetical
           protein F26E4.3 protein.
          Length = 491

 Score = 68.1 bits (159), Expect = 5e-12
 Identities = 30/55 (54%), Positives = 36/55 (65%), Gaps = 2/55 (3%)
 Frame = +1

Query: 337 GRYCAARPDDNKCCYNRKDDCSVPILGT-LCYCDEFCDH-TRHHDDCCPDYKKVC 495
           G YC+ R   + CC NR DDC+VPILG  LCYCD FCD      +DCCPD++  C
Sbjct: 67  GDYCSVRT--HTCCENRDDDCTVPILGDHLCYCDMFCDRGPDGGNDCCPDFEATC 119



 Score = 31.5 bits (68), Expect = 0.58
 Identities = 11/40 (27%), Positives = 19/40 (47%)
 Frame = +3

Query: 555 DQVNKGCNLCTCKVDNDNNAYWSCTQDTCMMSEDLVNDVN 674
           D   K C  CTC     +N +W C    C++  D++  ++
Sbjct: 140 DTKEKNCEKCTC-----HNGFWKCDGTACLIQPDILEKIH 174


>Z92809-3|CAB07269.1|  440|Caenorhabditis elegans Hypothetical
           protein R17.3 protein.
          Length = 440

 Score = 33.5 bits (73), Expect = 0.14
 Identities = 14/26 (53%), Positives = 14/26 (53%)
 Frame = +1

Query: 424 CYCDEFCDHTRHHDDCCPDYKKVCSP 501
           CYCDE C       DCC DY  VC P
Sbjct: 219 CYCDEHCVTL---GDCCSDYTFVCPP 241


>Z98877-16|CAH60800.1|  975|Caenorhabditis elegans Hypothetical
            protein Y69H2.10b protein.
          Length = 975

 Score = 31.9 bits (69), Expect = 0.44
 Identities = 19/59 (32%), Positives = 24/59 (40%), Gaps = 1/59 (1%)
 Frame = +1

Query: 442  CDHTRHHDDCCPDYKKVCS-PPQKPQYRANTSNRLMHRTIKLTKAAICVHVRSIMTTTR 615
            C  T+ + DC P  +K CS  P+     A T         KL     CVH R    TT+
Sbjct: 862  CLETQEYTDCLPKCQKQCSGAPKCEAGSACTPGCFCRSNYKLDSNGDCVHKRKCSETTK 920


>Z81468-2|CAN99666.1|  950|Caenorhabditis elegans Hypothetical
           protein C13B4.1b protein.
          Length = 950

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 15/50 (30%), Positives = 23/50 (46%)
 Frame = +3

Query: 534 QQTYAPDDQVNKGCNLCTCKVDNDNNAYWSCTQDTCMMSEDLVNDVNQQG 683
           QQ  A   Q++KGC++      N     WS   D  ++ E  VN   ++G
Sbjct: 17  QQFDASQCQISKGCHIPESTQSNGMGVAWSLLDDETLLLELFVNSDEEKG 66


>Z81468-1|CAB03875.3| 1010|Caenorhabditis elegans Hypothetical
           protein C13B4.1a protein.
          Length = 1010

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 15/50 (30%), Positives = 23/50 (46%)
 Frame = +3

Query: 534 QQTYAPDDQVNKGCNLCTCKVDNDNNAYWSCTQDTCMMSEDLVNDVNQQG 683
           QQ  A   Q++KGC++      N     WS   D  ++ E  VN   ++G
Sbjct: 17  QQFDASQCQISKGCHIPESTQSNGMGVAWSLLDDETLLLELFVNSDEEKG 66


>U28929-2|AAN63411.1|  306|Caenorhabditis elegans Hypothetical
           protein F09C12.8 protein.
          Length = 306

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 18/63 (28%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
 Frame = +1

Query: 448 HTRHHDDCCPDYKKVCSPPQKPQ-YRANTSNRL-MHRTIKLTKAAICVHVRSIMTTTRIG 621
           H+   DDCCP + + C+   K + +  N   RL + R +K      C+     +    IG
Sbjct: 53  HSERVDDCCPGWIEKCNKEGKYEPFDLNMPTRLPIQRPLKDYTRDTCITRSGAVLAQMIG 112

Query: 622 RAL 630
           R L
Sbjct: 113 RGL 115


>U00066-2|AAA50741.2|  248|Caenorhabditis elegans Hypothetical
           protein R12B2.3 protein.
          Length = 248

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = -1

Query: 344 YRPLSNSGPEYAKQDDSNGRTKTTRNMFAIQFYINILG 231
           +RPL  SG    + DDSNG   +T ++ ++   ++ LG
Sbjct: 29  FRPLDLSGKRLVRPDDSNGTRSSTDDVHSMCSQLSNLG 66


>Z70757-1|CAA94805.1|  497|Caenorhabditis elegans Hypothetical
           protein ZK287.1 protein.
          Length = 497

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 20/62 (32%), Positives = 25/62 (40%), Gaps = 8/62 (12%)
 Frame = +1

Query: 364 DNKCC--YNRKDDCSV---PILGTLCYCDEFCDHTRHHDDCCPDYKKVCS---PPQKPQY 519
           +N CC     +  CS    P +     CDE C+ TR+  DC       CS    P KP  
Sbjct: 9   NNYCCECVASQGRCSADTCPCVAARKTCDEHCESTRYRGDCLNQAICKCSCEVDPAKPAK 68

Query: 520 RA 525
            A
Sbjct: 69  NA 70


>Z81111-2|CAB03266.1|  535|Caenorhabditis elegans Hypothetical
           protein T01G5.2 protein.
          Length = 535

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = -2

Query: 487 SCNRDSSHRGVLCDHRTRRNSREYPISALSNRLFDCS 377
           + N  + HRG +C H+++  + E    A  + LFD S
Sbjct: 407 NANTLARHRGAICLHKSQMKNTEVLKKAFKSVLFDAS 443


>Z50029-1|CAA90340.2|  460|Caenorhabditis elegans Hypothetical
           protein ZC504.1 protein.
          Length = 460

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 12/54 (22%), Positives = 20/54 (37%)
 Frame = +1

Query: 382 NRKDDCSVPILGTLCYCDEFCDHTRHHDDCCPDYKKVCSPPQKPQYRANTSNRL 543
           N+   C+      +C  D  C     H  CC  +  +C   Q+P     + N +
Sbjct: 119 NQPMRCNPSAYSDVCPADYVCTTQGLHSFCCSPHDAICPAGQQPYVHIVSKNSM 172


>AF040661-12|AAG24221.1|  210|Caenorhabditis elegans Hypothetical
           protein W10G11.14 protein.
          Length = 210

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = +1

Query: 307 LAYSGPELLNGRYCAARPDDNKCCYNRKDDCSVPILGTLC 426
           LA   P +LN +Y AA  DD  C    + D +  + G +C
Sbjct: 165 LASKTPTILNDQYFAATLDDTNCDGMLEGDAARVLRGYIC 204


>Z69385-3|CAA93426.2| 1477|Caenorhabditis elegans Hypothetical protein
            ZK593.4 protein.
          Length = 1477

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 13/43 (30%), Positives = 22/43 (51%), Gaps = 5/43 (11%)
 Frame = -3

Query: 678  VG*RRSPGPRSSCTCLECTT--NTRCCHYRPYMY---TDCSLC 565
            +G  +S    S+ TC+ C +  + RCC + P++      C LC
Sbjct: 1209 LGFNKSDDSESTLTCIMCDSEFHVRCCEWSPFLEKLPEGCFLC 1251


>U41018-2|AAA82325.2|  260|Caenorhabditis elegans Hypothetical
           protein ZK816.4 protein.
          Length = 260

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 12/46 (26%), Positives = 21/46 (45%)
 Frame = +1

Query: 409 ILGTLCYCDEFCDHTRHHDDCCPDYKKVCSPPQKPQYRANTSNRLM 546
           I  T  Y  E CD+    D C   YK VC    + ++  + + +++
Sbjct: 93  IFRTKAYFSEVCDNFFLFDVCIEPYKDVCFAADRARFNYDAAIKIL 138


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,476,175
Number of Sequences: 27780
Number of extensions: 337898
Number of successful extensions: 1092
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1023
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1089
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1560745544
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)