Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30675X
(493 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0934 - 12513810-12513834,12513918-12513970,12514212-125145... 128 2e-30
03_05_0125 - 21039767-21039791,21039876-21039922,21040220-210405... 127 6e-30
12_02_1042 + 25638585-25638711,25639585-25639745,25639873-256400... 35 0.031
02_04_0038 - 19110520-19110574,19110684-19110811,19110912-191110... 35 0.031
07_03_1639 + 28305801-28305958,28306240-28306249 31 0.50
03_06_0658 - 35335639-35335731,35335814-35335871,35336213-353363... 29 1.5
01_01_0585 - 4328725-4329030,4329333-4329551,4329752-4329820,432... 29 1.5
04_03_0227 + 12979635-12980363,12980439-12980474,12980604-129808... 29 2.7
04_03_0266 + 13648287-13649099,13649186-13649524 28 3.5
10_06_0028 - 9802362-9802475,9802919-9803090,9803167-9803208,980... 28 4.7
09_06_0281 + 22014394-22015534,22016041-22017056 28 4.7
06_01_0514 - 3706178-3706787,3709334-3709441,3710425-3710810 28 4.7
06_01_0513 - 3701148-3701757,3702654-3703228 28 4.7
02_02_0421 - 10042184-10042197,10042442-10042822,10044158-100442... 28 4.7
02_01_0360 - 2594534-2594601,2594778-2594829,2594915-2595029,259... 28 4.7
12_01_0476 + 3738526-3738567,3738695-3738739,3739240-3739601,373... 27 6.2
10_08_0781 + 20509033-20509714,20510048-20510191,20510604-205107... 27 6.2
02_05_0067 + 25557975-25558553 27 6.2
02_03_0300 + 17454622-17455402,17455535-17456977,17457015-174573... 27 6.2
07_03_0383 - 17476271-17479228,17480466-17480750 27 8.2
>03_02_0934 -
12513810-12513834,12513918-12513970,12514212-12514525,
12514608-12514730,12515710-12515821
Length = 208
Score = 128 bits (309), Expect = 2e-30
Identities = 56/80 (70%), Positives = 69/80 (86%)
Frame = +1
Query: 16 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 195
M SLKLQKRLAASV++CGK KVWLDPNE+NEI+ NSRQNIRK++KDG +IKKP +HSR
Sbjct: 1 MVSLKLQKRLAASVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIKKPQKIHSR 60
Query: 196 ARVRKNTEARRKGRHCGFGK 255
+R R+ EA++KGRH G+GK
Sbjct: 61 SRARRAHEAKQKGRHSGYGK 80
Score = 96.7 bits (230), Expect = 9e-21
Identities = 48/92 (52%), Positives = 56/92 (60%)
Frame = +3
Query: 213 HRST*KGSSLWLW*RRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMK 392
H + KG RRGT AR+P K LW AKKID+H+YH +YMK
Sbjct: 67 HEAKQKGRHSGYGKRRGTREARLPTKILWMRRMRVLRRLLRKYREAKKIDKHMYHDMYMK 126
Query: 393 AKGSVFKNKRVLMEYIHRKKAEKARTKMLSDQ 488
KG++FKNKRVLME IH+ KAEKAR K LSDQ
Sbjct: 127 VKGNMFKNKRVLMESIHKSKAEKAREKTLSDQ 158
>03_05_0125 -
21039767-21039791,21039876-21039922,21040220-21040533,
21040613-21040735,21041599-21041710
Length = 206
Score = 127 bits (306), Expect = 6e-30
Identities = 55/80 (68%), Positives = 69/80 (86%)
Frame = +1
Query: 16 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 195
M SLKLQKRLA+SV++CGK KVWLDPNE+NEI+ NSRQNIRK++KDG +IKKP +HSR
Sbjct: 1 MVSLKLQKRLASSVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIKKPQKIHSR 60
Query: 196 ARVRKNTEARRKGRHCGFGK 255
+R R+ EA++KGRH G+GK
Sbjct: 61 SRARRAHEAKQKGRHSGYGK 80
Score = 96.7 bits (230), Expect = 9e-21
Identities = 48/92 (52%), Positives = 56/92 (60%)
Frame = +3
Query: 213 HRST*KGSSLWLW*RRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMK 392
H + KG RRGT AR+P K LW AKKID+H+YH +YMK
Sbjct: 67 HEAKQKGRHSGYGKRRGTREARLPTKILWMRRMRVLRRLLRKYREAKKIDKHMYHDMYMK 126
Query: 393 AKGSVFKNKRVLMEYIHRKKAEKARTKMLSDQ 488
KG++FKNKRVLME IH+ KAEKAR K LSDQ
Sbjct: 127 VKGNMFKNKRVLMESIHKSKAEKAREKTLSDQ 158
>12_02_1042 + 25638585-25638711,25639585-25639745,25639873-25640064,
25640221-25640315,25640645-25640807,25640905-25641015,
25641611-25642741,25642813-25642965,25643060-25643159,
25643333-25643427,25643508-25643681,25643751-25643807,
25643887-25643958,25644151-25644249,25644320-25644451,
25644549-25644722,25644830-25644957,25645065-25645119
Length = 1072
Score = 35.1 bits (77), Expect = 0.031
Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 3/89 (3%)
Frame = +1
Query: 31 LQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMI---KDGLVIKKPVAVHSRAR 201
LQ+ L + K W D E+N + + R + KM+ D LV+ +A H
Sbjct: 748 LQQFLVTIFDKLDKGNPWDDDFELNTLLQESIRNSADKMLLTAPDSLVVS--LAKHDTRN 805
Query: 202 VRKNTEARRKGRHCGFGKEEVQPMRVCHR 288
+ T RKGR GFG E + + ++
Sbjct: 806 DEETTSISRKGRAQGFGIEALDVLNFTYK 834
>02_04_0038 -
19110520-19110574,19110684-19110811,19110912-19111085,
19111189-19111320,19111391-19111489,19111680-19111751,
19111831-19111887,19111957-19112130,19112211-19112305,
19112478-19112577,19112672-19112824,19112896-19114026,
19114621-19114731,19114829-19114991,19115364-19115458,
19115613-19115804,19115929-19116069
Length = 1023
Score = 35.1 bits (77), Expect = 0.031
Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 3/89 (3%)
Frame = +1
Query: 31 LQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMI---KDGLVIKKPVAVHSRAR 201
LQ+ L + K W D E+N + + R + KM+ D LV+ +A H
Sbjct: 699 LQQFLVTIFDKLDKGNPWDDDFELNTLLQESIRNSADKMLLTAPDSLVVS--LAKHDTRN 756
Query: 202 VRKNTEARRKGRHCGFGKEEVQPMRVCHR 288
+ T RKGR GFG E + + ++
Sbjct: 757 DEETTSISRKGRAQGFGIEALDVLNFTYK 785
>07_03_1639 + 28305801-28305958,28306240-28306249
Length = 55
Score = 31.1 bits (67), Expect = 0.50
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = +3
Query: 387 MKAKGSVFKNKRVLMEYIHRKKAEKARTKMLSDQ 488
MK KG++ NKR + +AEKAR + LSDQ
Sbjct: 1 MKVKGNMLNNKRGPYGEYPQVQAEKARKRTLSDQ 34
>03_06_0658 -
35335639-35335731,35335814-35335871,35336213-35336355,
35336624-35336703,35336916-35337075,35337531-35337668,
35338487-35338567,35338640-35338693,35339192-35339297,
35339615-35339682,35340076-35340225,35340401-35340519,
35341151-35341362,35342118-35342205,35342365-35342479,
35343083-35343274,35343809-35344018
Length = 688
Score = 29.5 bits (63), Expect = 1.5
Identities = 18/44 (40%), Positives = 21/44 (47%)
Frame = -2
Query: 135 VLSGVGVCDLIDFIWIQPHLLFTTSHNRGCKPLLQLEGTHPDTV 4
VL G D D WI PH T +R C +L LEG DT+
Sbjct: 519 VLDQEGWFDTGDIGWIAPHC--PTGPSRKCGGMLVLEGRAKDTI 560
>01_01_0585 -
4328725-4329030,4329333-4329551,4329752-4329820,
4329925-4331469,4332220-4332429,4332563-4332713,
4332791-4333031,4333898-4333956,4334379-4334653,
4334813-4334955,4335034-4335088,4335181-4335258,
4335351-4335478,4335533-4335575
Length = 1173
Score = 29.5 bits (63), Expect = 1.5
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = -2
Query: 273 HWLYLFFTKATVTTLSTCFCVFADTSAGVYCYRFLDDETIL 151
+W++L F +A T +S + ADTSA + +R L T+L
Sbjct: 395 NWMHLHFLRAIGTAMSMRAGIAADTSAAL-LFRILSQPTLL 434
>04_03_0227 +
12979635-12980363,12980439-12980474,12980604-12980873,
12980962-12981099,12981347-12981795,12981885-12982055,
12982136-12982370
Length = 675
Score = 28.7 bits (61), Expect = 2.7
Identities = 19/57 (33%), Positives = 24/57 (42%)
Frame = +1
Query: 4 HRVRMSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKK 174
+RVR L K V R LDP +NE N R N+ IKD L ++
Sbjct: 530 YRVRAIDTNLLKLTWKHVHRKAPHVALLDPAVVNETTLKNDRANMMGYIKDCLFARQ 586
>04_03_0266 + 13648287-13649099,13649186-13649524
Length = 383
Score = 28.3 bits (60), Expect = 3.5
Identities = 14/49 (28%), Positives = 27/49 (55%)
Frame = +1
Query: 70 KKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNT 216
K+K+ L +E ++ T R+ RK+ K + KK + H ++RK++
Sbjct: 320 KRKLVLSDDEGDDAEKTRDRETTRKLPKQA-IPKKKTSSHPMPKIRKSS 367
>10_06_0028 -
9802362-9802475,9802919-9803090,9803167-9803208,
9803344-9804011,9804098-9804418,9804495-9804833,
9804856-9805109,9805300-9805510
Length = 706
Score = 27.9 bits (59), Expect = 4.7
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +1
Query: 85 LDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVH 189
LDP +NE N R NI IKD L ++ +H
Sbjct: 628 LDPAVVNETTLKNDRANIVDYIKDCLFARQRQGLH 662
>09_06_0281 + 22014394-22015534,22016041-22017056
Length = 718
Score = 27.9 bits (59), Expect = 4.7
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = -2
Query: 186 YCYRFLDDETILDHLTDVLSGVGVCDLID 100
Y YR DDE+++ H T +L+ + D++D
Sbjct: 657 YSYRSPDDESLVTHFTALLTQGNLGDILD 685
>06_01_0514 - 3706178-3706787,3709334-3709441,3710425-3710810
Length = 367
Score = 27.9 bits (59), Expect = 4.7
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +2
Query: 188 TPALVSAKTQKHVERVVTVALVKKRYS 268
TP VS+ QK+ RV + A K+RYS
Sbjct: 191 TPVQVSSHAQKYFRRVESAAADKQRYS 217
>06_01_0513 - 3701148-3701757,3702654-3703228
Length = 394
Score = 27.9 bits (59), Expect = 4.7
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +2
Query: 188 TPALVSAKTQKHVERVVTVALVKKRYS 268
TP VS+ QK+ RV + A K+RYS
Sbjct: 218 TPVQVSSHAQKYFRRVESAAADKQRYS 244
>02_02_0421 -
10042184-10042197,10042442-10042822,10044158-10044261,
10044634-10044734,10044806-10045147,10045981-10046158,
10047696-10047776,10049190-10049449
Length = 486
Score = 27.9 bits (59), Expect = 4.7
Identities = 18/72 (25%), Positives = 31/72 (43%)
Frame = +1
Query: 16 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 195
+ SL L R+ C +V+ D + N +NIRK + ++++ P+A +
Sbjct: 103 IESLSLMIRMLL-YCECFAARVYCDGCHCSPCGNKIENENIRKEAIETILLRNPLAFQPK 161
Query: 196 ARVRKNTEARRK 231
NT RK
Sbjct: 162 IENSPNTVTVRK 173
>02_01_0360 -
2594534-2594601,2594778-2594829,2594915-2595029,
2595124-2595212,2595326-2595391,2595468-2595657,
2595811-2596037,2596111-2596185,2596283-2596354,
2596507-2596577,2596848-2597036,2597186-2597298,
2598063-2598268
Length = 510
Score = 27.9 bits (59), Expect = 4.7
Identities = 28/99 (28%), Positives = 41/99 (41%), Gaps = 4/99 (4%)
Frame = -1
Query: 487 WSLSIFVLAFSAFFLWMYSMSTRLFLNTLPFAFM*SEWYRCLSIFLAVLYFRSNFLKTLC 308
W++S+ L+ AFF+W S N A S++ L I + Y LKT
Sbjct: 116 WAVSVSCLSMLAFFVWHLRQSPS---NGNSIA---SKYGLLLIILYPLAYLFHLLLKTDG 169
Query: 307 LCTHSSFCGIRALA-VPLLYQSHSDDPFY---VLLCFCG 203
C F I +A P + + PF+ VL +CG
Sbjct: 170 DCICLDFRAIHTIASYPTSFHAGMGRPFWSQVVLFLYCG 208
>12_01_0476 +
3738526-3738567,3738695-3738739,3739240-3739601,
3739691-3740057,3740490-3740555,3741630-3741743
Length = 331
Score = 27.5 bits (58), Expect = 6.2
Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +1
Query: 40 RLAASVMRCGKKKVWLDPNEINEIA--NTNSRQNIRKMIKDGLV 165
R A RC + LDPNEI ++ SR+ + +++ G++
Sbjct: 236 RFALHCRRCERDATPLDPNEIKHVSPYGITSREQVLEVVARGIL 279
>10_08_0781 +
20509033-20509714,20510048-20510191,20510604-20510719,
20511356-20511520,20511822-20512043,20512613-20512735
Length = 483
Score = 27.5 bits (58), Expect = 6.2
Identities = 16/58 (27%), Positives = 29/58 (50%)
Frame = +1
Query: 82 WLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKGRHCGFGK 255
++D N+ + + +SR ++ ++ GL +K PV + VR E GR G G+
Sbjct: 29 YVDGNDTEDCYSGSSRASLAGALRQGLNLKSPVLGYKTPNVR---ELYTLGRELGQGQ 83
>02_05_0067 + 25557975-25558553
Length = 192
Score = 27.5 bits (58), Expect = 6.2
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -2
Query: 423 HACS*THYPSPSCRVSGIDACQSSW 349
H C H P CR + +DA Q+ W
Sbjct: 148 HGCDKEHAYQPPCRPNVVDASQAVW 172
>02_03_0300 +
17454622-17455402,17455535-17456977,17457015-17457317,
17458429-17458519,17458623-17459757,17459998-17460077,
17460449-17460533,17460614-17460705,17461079-17461147,
17461227-17461263,17461351-17461433,17461695-17461840,
17461868-17462138,17462245-17462281,17462428-17462721
Length = 1648
Score = 27.5 bits (58), Expect = 6.2
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +1
Query: 70 KKKVWLDPN-EINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRK 231
K KVW P E+ + +R + +K + +KP A R RVRK TEA K
Sbjct: 681 KPKVWSRPRKEVEPVGKPKARGHPKKQAEPD---EKPKA---RGRVRKTTEANGK 729
>07_03_0383 - 17476271-17479228,17480466-17480750
Length = 1080
Score = 27.1 bits (57), Expect = 8.2
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
Frame = -1
Query: 295 SSFCGIRALAVPLLYQSHSDDPFYVLLCF--CG-HERGSVL 182
S FCGI A + S+ + P+Y+ CF C + GSV+
Sbjct: 373 SDFCGISARIRSTINMSYLELPYYLKRCFLYCALYPEGSVI 413
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,695,290
Number of Sequences: 37544
Number of extensions: 284064
Number of successful extensions: 784
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 755
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 780
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1023611560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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