Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30675X
         (493 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    23   1.3  
S78458-1|AAB34402.1|   46|Apis mellifera apamin protein.               22   4.1  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    22   4.1  
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    21   9.4  
AY656663-1|AAT68000.1|  148|Apis mellifera pteropsin protein.          21   9.4  

>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +3

Query: 12  QDEFPQAAEEACSLCYAMW*KEG 80
           +DEF +  +  CSLC   + ++G
Sbjct: 263 EDEFDEFGDSKCSLCQRRFEEQG 285


>S78458-1|AAB34402.1|   46|Apis mellifera apamin protein.
          Length = 46

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -1

Query: 370 RCLSIFLAVLYFRSNFLKTLCLC 302
           RC+ +FL+V+   S F+  +  C
Sbjct: 6   RCIYLFLSVILITSYFVTPVMPC 28


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 9/22 (40%), Positives = 10/22 (45%)
 Frame = +1

Query: 193 RARVRKNTEARRKGRHCGFGKE 258
           +A      E R K  HC  GKE
Sbjct: 767 KATTSLEAEKREKSEHCEKGKE 788


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -1

Query: 280 IRALAVPLLYQSHSDDP 230
           I    +PLL + H DDP
Sbjct: 321 ITCFTMPLLDKMHIDDP 337


>AY656663-1|AAT68000.1|  148|Apis mellifera pteropsin protein.
          Length = 148

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -1

Query: 484 SLSIFVLAFSAFFLWMYSMSTRL 416
           +LSI      A F+W+Y++S  L
Sbjct: 9   ALSIRHAVILASFVWIYALSLSL 31


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,044
Number of Sequences: 438
Number of extensions: 2802
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13544190
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)