Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30674
         (601 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81494-10|CAN86581.1| 1507|Caenorhabditis elegans Hypothetical p...    29   1.9  
Z81494-9|CAB04052.2| 1505|Caenorhabditis elegans Hypothetical pr...    29   1.9  
Z82078-3|CAB04942.1|  313|Caenorhabditis elegans Hypothetical pr...    27   7.7  
Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical pr...    27   7.7  
U97196-11|AAB52464.1|  273|Caenorhabditis elegans Hypothetical p...    27   7.7  
AL110490-3|CAB54449.1|  892|Caenorhabditis elegans Hypothetical ...    27   7.7  

>Z81494-10|CAN86581.1| 1507|Caenorhabditis elegans Hypothetical
           protein F02E9.4b protein.
          Length = 1507

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
 Frame = +3

Query: 57  SPLRLSLSGPSAAALQYYLVPPR--ATTPSEAPSRAAHRVVQIFIGERQASD 206
           SPL+ S S  ++A  Q YL+P    A TP    S AA  + Q FI + +A++
Sbjct: 120 SPLQPSHSPAASALQQQYLLPSHSPAITPFARNSEAARNIEQ-FIAQEEAAN 170


>Z81494-9|CAB04052.2| 1505|Caenorhabditis elegans Hypothetical
           protein F02E9.4a protein.
          Length = 1505

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
 Frame = +3

Query: 57  SPLRLSLSGPSAAALQYYLVPPR--ATTPSEAPSRAAHRVVQIFIGERQASD 206
           SPL+ S S  ++A  Q YL+P    A TP    S AA  + Q FI + +A++
Sbjct: 120 SPLQPSHSPAASALQQQYLLPSHSPAITPFARNSEAARNIEQ-FIAQEEAAN 170


>Z82078-3|CAB04942.1|  313|Caenorhabditis elegans Hypothetical
           protein W09D6.2 protein.
          Length = 313

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = -2

Query: 54  PRVQRCPAAVHPRSG 10
           P VQ+CPAA+ PR G
Sbjct: 230 PEVQKCPAAIIPRIG 244


>Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical protein
            F47A4.2 protein.
          Length = 3498

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = -1

Query: 280  RTSDAGPAPHTPRTGTAITESTPARSEACRSP 185
            R SDA  A + P T   +  STP  +   RSP
Sbjct: 2283 RASDAAAATNAPETNKDMDTSTPKPAPVTRSP 2314


>U97196-11|AAB52464.1|  273|Caenorhabditis elegans Hypothetical
           protein B0207.11 protein.
          Length = 273

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 23/54 (42%), Positives = 27/54 (50%), Gaps = 6/54 (11%)
 Frame = -1

Query: 313 VLVDDSHSEA--GRTSDAGPAPHTPRTGT----AITESTPARSEACRSPINICT 170
           VLVDD+ S    G  S+    P T  T T    AI EST  RSEA  + I + T
Sbjct: 91  VLVDDNQSYVMIGPPSEPVEPPATLSTETSKTNAIEESTVKRSEALSAYIGVAT 144


>AL110490-3|CAB54449.1|  892|Caenorhabditis elegans Hypothetical
           protein Y48B6A.3 protein.
          Length = 892

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 18/51 (35%), Positives = 20/51 (39%)
 Frame = +2

Query: 80  RTLSRGSPVLSSPAARHHPLRSAESSGAPRCTNIYWRAAGFGPRGGGLSDR 232
           R   RGS   S     HH +R     G     N Y    G G  GGG +DR
Sbjct: 747 RNAPRGSLDQSGHRQVHHYVRGGGGGGGGYRGNSYDDRRGGGGGGGGYNDR 797


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,089,242
Number of Sequences: 27780
Number of extensions: 264829
Number of successful extensions: 818
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 784
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 817
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1279376318
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)