Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30673
         (408 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8IHW8 Cluster: Putative uncharacterized protein; n=2; ...    33   1.7  
UniRef50_Q8IEE4 Cluster: Putative uncharacterized protein Phat20...    33   2.2  
UniRef50_Q7RCB8 Cluster: RNA recognition motif, putative; n=5; P...    32   3.9  
UniRef50_Q06VR1 Cluster: Putative uncharacterized protein; n=1; ...    32   5.1  
UniRef50_Q08520 Cluster: G-protein coupled receptor homolog K2; ...    31   8.9  

>UniRef50_Q8IHW8 Cluster: Putative uncharacterized protein; n=2;
           Plasmodium|Rep: Putative uncharacterized protein -
           Plasmodium falciparum (isolate 3D7)
          Length = 2213

 Score = 33.5 bits (73), Expect = 1.7
 Identities = 18/69 (26%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
 Frame = -3

Query: 295 NLGIL*KKRNKDKCFFNSK*EQYFRNDNNSTKKHVNNIDI-VFEVD*ESVFSSVHINYVC 119
           N  +    + K K + N +  QY   + N  K+H NN D+ VF+ D E ++  +H  ++ 
Sbjct: 619 NTRLFSNSKEKKKNYKNHEHSQYDNYNKNKKKEHYNNYDLNVFKSDDEKIYFLLHCCFMN 678

Query: 118 RISHVFLPF 92
           + ++  + F
Sbjct: 679 KENYFAIYF 687


>UniRef50_Q8IEE4 Cluster: Putative uncharacterized protein Phat201;
           n=2; Eukaryota|Rep: Putative uncharacterized protein
           Phat201 - Plasmodium falciparum (isolate 3D7)
          Length = 2672

 Score = 33.1 bits (72), Expect = 2.2
 Identities = 16/43 (37%), Positives = 27/43 (62%), Gaps = 3/43 (6%)
 Frame = -3

Query: 247 NSK*EQYFR---NDNNSTKKHVNNIDIVFEVD*ESVFSSVHIN 128
           N K E YF    N+NN+TK+++NN  +   +D ++   +VH+N
Sbjct: 604 NIKLENYFNEVLNNNNNTKEYINNTYMNKHIDIDTQHMNVHLN 646


>UniRef50_Q7RCB8 Cluster: RNA recognition motif, putative; n=5;
           Plasmodium (Vinckeia)|Rep: RNA recognition motif,
           putative - Plasmodium yoelii yoelii
          Length = 1485

 Score = 32.3 bits (70), Expect = 3.9
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = -3

Query: 277 KKRNKDKCFFNSK*EQYFRNDNNSTKKHVNNIDIV 173
           K  NK+ C  N+      RNDNN    H+NNID +
Sbjct: 466 KNNNKNICGINNN-SLINRNDNNIRNNHINNIDSI 499


>UniRef50_Q06VR1 Cluster: Putative uncharacterized protein; n=1;
           Trichoplusia ni ascovirus 2c|Rep: Putative
           uncharacterized protein - Trichoplusia ni ascovirus 2c
          Length = 289

 Score = 31.9 bits (69), Expect = 5.1
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = -3

Query: 256 CFFNSK*EQYFRNDNNSTKKHVNNIDIVFEVD 161
           C  N+    YF NDN ++K  + N+D+  E D
Sbjct: 161 CVHNNINSSYFSNDNKASKSSLKNVDVRIEFD 192


>UniRef50_Q08520 Cluster: G-protein coupled receptor homolog K2;
           n=4; Swinepox virus|Rep: G-protein coupled receptor
           homolog K2 - Swinepox virus (strain Kasza) (SWPV)
          Length = 370

 Score = 31.1 bits (67), Expect = 8.9
 Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
 Frame = -1

Query: 255 VFLILNKNNIFAMIIIA-RRNTSITLILFLK*IKSRCLVRFTLIMFVVY 112
           +FL+ +  NIF + +IA +RN SIT I  L    S C+  F  I F+VY
Sbjct: 69  LFLLGSIGNIFVVSLIAFKRNKSITDIYILNLSMSDCIFVFQ-IPFIVY 116


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 263,938,195
Number of Sequences: 1657284
Number of extensions: 4093351
Number of successful extensions: 8969
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8412
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8952
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 18196175969
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)