Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30673
         (408 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like pr...    21   4.6  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    21   6.1  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    21   6.1  

>DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like
           protein protein.
          Length = 135

 Score = 21.0 bits (42), Expect = 4.6
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = -2

Query: 128 LCLSYITCIFA 96
           LCL Y TC+++
Sbjct: 7   LCLVYATCVYS 17


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 20.6 bits (41), Expect = 6.1
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -1

Query: 147 LVRFTLIMFVVYHMYFC 97
           L +   +MFV Y++Y C
Sbjct: 184 LTQAIFLMFVSYNIYVC 200


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 20.6 bits (41), Expect = 6.1
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -1

Query: 147 LVRFTLIMFVVYHMYFC 97
           L +   +MFV Y++Y C
Sbjct: 110 LTQAIFLMFVSYNIYVC 126


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,662
Number of Sequences: 336
Number of extensions: 1315
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8857716
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)