Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30672
(620 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 161 3e-40
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 160 6e-40
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 158 3e-39
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 158 3e-39
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 151 3e-37
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 151 3e-37
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 108 4e-24
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 108 4e-24
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 105 2e-23
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 98 5e-21
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 98 5e-21
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 98 5e-21
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 98 5e-21
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 97 9e-21
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 95 3e-20
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 95 3e-20
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 95 5e-20
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 94 6e-20
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 93 1e-19
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 93 1e-19
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 93 1e-19
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 93 1e-19
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 89 2e-18
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 89 2e-18
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 66 3e-11
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 66 3e-11
U39652-2|AAA80404.1| 817|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z92790-2|CAB07224.2| 377|Caenorhabditis elegans Hypothetical pr... 28 6.2
U55364-6|AAA97973.1| 2541|Caenorhabditis elegans Hypothetical pr... 28 6.2
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 161 bits (392), Expect = 3e-40
Identities = 73/93 (78%), Positives = 81/93 (87%)
Frame = +3
Query: 228 DLCLLQ*GLVATAESGGKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNN 407
DL L + + +GGKYVPRA+L+DLEPGTMD+VRSG +GQLFRPDNFVFGQSGAGNN
Sbjct: 41 DLQLERINVYYNEANGGKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNN 100
Query: 408 WAKGHYTEGAELVDDVLDVVRKECENCDCLQGF 506
WAKGHYTEGAELVD+VLDVVRKE E CDCLQGF
Sbjct: 101 WAKGHYTEGAELVDNVLDVVRKEAEGCDCLQGF 133
Score = 105 bits (253), Expect = 2e-23
Identities = 45/55 (81%), Positives = 51/55 (92%)
Frame = +1
Query: 91 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEAS 255
MREIVH+QAGQCGNQIGAKFWE+IS+EHGI P G Y+G SDLQLERI+VYYNEA+
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQLERINVYYNEAN 55
Score = 37.1 bits (82), Expect = 0.010
Identities = 15/18 (83%), Positives = 18/18 (100%)
Frame = +2
Query: 566 KIREEYPDRIMNTYSVVP 619
KIREEYPDRIM+++SVVP
Sbjct: 154 KIREEYPDRIMSSFSVVP 171
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 160 bits (389), Expect = 6e-40
Identities = 73/93 (78%), Positives = 81/93 (87%)
Frame = +3
Query: 228 DLCLLQ*GLVATAESGGKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNN 407
DL L + + SGGKYVPRA L+DLEPGTMD+VR+G +GQLFRPDNFVFGQSGAGNN
Sbjct: 41 DLQLERINVYYNEASGGKYVPRACLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNN 100
Query: 408 WAKGHYTEGAELVDDVLDVVRKECENCDCLQGF 506
WAKGHYTEGAELVD+VLDVVRKE E+CDCLQGF
Sbjct: 101 WAKGHYTEGAELVDNVLDVVRKEAESCDCLQGF 133
Score = 111 bits (267), Expect = 4e-25
Identities = 48/55 (87%), Positives = 52/55 (94%)
Frame = +1
Query: 91 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEAS 255
MREIVH+QAGQCGNQIGAKFWE+IS+EHGIDPTG Y G SDLQLERI+VYYNEAS
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQLERINVYYNEAS 55
Score = 37.5 bits (83), Expect = 0.008
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = +2
Query: 566 KIREEYPDRIMNTYSVVP 619
KIREEYPDRIM T+SVVP
Sbjct: 154 KIREEYPDRIMMTFSVVP 171
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 158 bits (384), Expect = 3e-39
Identities = 68/79 (86%), Positives = 75/79 (94%)
Frame = +3
Query: 270 SGGKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 449
+ GKYVPRA+L+DLEPGTMD+VRSG +GQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD
Sbjct: 55 NNGKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 114
Query: 450 DVLDVVRKECENCDCLQGF 506
+VLDV+RKE E CDCLQGF
Sbjct: 115 NVLDVIRKEAEGCDCLQGF 133
Score = 102 bits (245), Expect = 2e-22
Identities = 43/55 (78%), Positives = 50/55 (90%)
Frame = +1
Query: 91 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEAS 255
MREIVH+QAGQCGNQIG+KFWE+IS+EHGI P G ++G SDLQLERI VYYNEA+
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQLERIDVYYNEAN 55
Score = 35.5 bits (78), Expect = 0.031
Identities = 14/18 (77%), Positives = 18/18 (100%)
Frame = +2
Query: 566 KIREEYPDRIMNTYSVVP 619
KIREE+PDRIM+++SVVP
Sbjct: 154 KIREEFPDRIMSSFSVVP 171
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 158 bits (384), Expect = 3e-39
Identities = 68/79 (86%), Positives = 75/79 (94%)
Frame = +3
Query: 270 SGGKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 449
+ GKYVPRA+L+DLEPGTMD+VRSG +GQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD
Sbjct: 55 NNGKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 114
Query: 450 DVLDVVRKECENCDCLQGF 506
+VLDV+RKE E CDCLQGF
Sbjct: 115 NVLDVIRKEAEGCDCLQGF 133
Score = 101 bits (242), Expect = 4e-22
Identities = 42/55 (76%), Positives = 50/55 (90%)
Frame = +1
Query: 91 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEAS 255
MREIVH+QAGQCGNQIG+KFWE+IS+EHGI P G ++G +DLQLERI VYYNEA+
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQLERIDVYYNEAN 55
Score = 37.1 bits (82), Expect = 0.010
Identities = 15/18 (83%), Positives = 18/18 (100%)
Frame = +2
Query: 566 KIREEYPDRIMNTYSVVP 619
KIREEYPDRIM+++SVVP
Sbjct: 154 KIREEYPDRIMSSFSVVP 171
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 151 bits (367), Expect = 3e-37
Identities = 68/81 (83%), Positives = 76/81 (93%), Gaps = 1/81 (1%)
Frame = +3
Query: 267 ESGG-KYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAEL 443
E+G KYVPRA+L+DLEPGTMD+VRSG +GQLFRPDN+VFGQSGAGNNWAKGHYTEGAEL
Sbjct: 53 EAGSNKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAEL 112
Query: 444 VDDVLDVVRKECENCDCLQGF 506
VD+VLDVVRKE E+ DCLQGF
Sbjct: 113 VDNVLDVVRKEAESTDCLQGF 133
Score = 105 bits (251), Expect = 3e-23
Identities = 45/54 (83%), Positives = 51/54 (94%)
Frame = +1
Query: 91 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEA 252
MREIVH+QAGQCGNQIG+KFWE+IS+EHGIDP+G Y G SDLQLERI+VYYNEA
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEA 54
Score = 40.7 bits (91), Expect = 8e-04
Identities = 17/18 (94%), Positives = 18/18 (100%)
Frame = +2
Query: 566 KIREEYPDRIMNTYSVVP 619
KIREEYPDRIMNT+SVVP
Sbjct: 154 KIREEYPDRIMNTFSVVP 171
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 151 bits (367), Expect = 3e-37
Identities = 68/81 (83%), Positives = 76/81 (93%), Gaps = 1/81 (1%)
Frame = +3
Query: 267 ESGG-KYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAEL 443
E+G KYVPRA+L+DLEPGTMD+VRSG +GQLFRPDN+VFGQSGAGNNWAKGHYTEGAEL
Sbjct: 53 EAGSNKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAEL 112
Query: 444 VDDVLDVVRKECENCDCLQGF 506
VD+VLDVVRKE E+ DCLQGF
Sbjct: 113 VDNVLDVVRKEAESTDCLQGF 133
Score = 105 bits (251), Expect = 3e-23
Identities = 45/54 (83%), Positives = 51/54 (94%)
Frame = +1
Query: 91 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEA 252
MREIVH+QAGQCGNQIG+KFWE+IS+EHGIDP+G Y G SDLQLERI+VYYNEA
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEA 54
Score = 40.7 bits (91), Expect = 8e-04
Identities = 17/18 (94%), Positives = 18/18 (100%)
Frame = +2
Query: 566 KIREEYPDRIMNTYSVVP 619
KIREEYPDRIMNT+SVVP
Sbjct: 154 KIREEYPDRIMNTFSVVP 171
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 108 bits (259), Expect = 4e-24
Identities = 47/78 (60%), Positives = 63/78 (80%)
Frame = +3
Query: 273 GGKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDD 452
G KYVPRAIL+DL+P +++ VRS YG+LF P+N V G+SGAGNNW++G+Y +GAE+VD
Sbjct: 56 GRKYVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDK 115
Query: 453 VLDVVRKECENCDCLQGF 506
VL V+R+E E D L+GF
Sbjct: 116 VLSVIRREAEAADSLEGF 133
Score = 83.0 bits (196), Expect = 2e-16
Identities = 35/58 (60%), Positives = 44/58 (75%)
Frame = +1
Query: 91 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASLRR 264
M+EI+++Q GQCGNQIGAKFWE ISEEHG+ G Y+G + QLERI+ YY E R+
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRK 58
Score = 27.5 bits (58), Expect = 8.2
Identities = 9/18 (50%), Positives = 15/18 (83%)
Frame = +2
Query: 566 KIREEYPDRIMNTYSVVP 619
K+REEY D+ ++T S++P
Sbjct: 154 KLREEYSDKTLSTCSIIP 171
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 108 bits (259), Expect = 4e-24
Identities = 47/78 (60%), Positives = 63/78 (80%)
Frame = +3
Query: 273 GGKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDD 452
G KYVPRAIL+DL+P +++ VRS YG+LF P+N V G+SGAGNNW++G+Y +GAE+VD
Sbjct: 56 GRKYVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDK 115
Query: 453 VLDVVRKECENCDCLQGF 506
VL V+R+E E D L+GF
Sbjct: 116 VLSVIRREAEAADSLEGF 133
Score = 83.0 bits (196), Expect = 2e-16
Identities = 35/58 (60%), Positives = 44/58 (75%)
Frame = +1
Query: 91 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASLRR 264
M+EI+++Q GQCGNQIGAKFWE ISEEHG+ G Y+G + QLERI+ YY E R+
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDNGSQLERITSYYKEMEGRK 58
Score = 27.5 bits (58), Expect = 8.2
Identities = 9/18 (50%), Positives = 15/18 (83%)
Frame = +2
Query: 566 KIREEYPDRIMNTYSVVP 619
K+REEY D+ ++T S++P
Sbjct: 154 KLREEYSDKTLSTCSIIP 171
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 105 bits (253), Expect = 2e-23
Identities = 45/77 (58%), Positives = 58/77 (75%)
Frame = +3
Query: 276 GKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDDV 455
GK+VPRAI +DLEP +D +R+G YG LF PD + G+ A NN+A+GHYT G EL+D V
Sbjct: 62 GKHVPRAIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYTIGKELIDVV 121
Query: 456 LDVVRKECENCDCLQGF 506
LD +RK+ ENC+ LQGF
Sbjct: 122 LDRIRKQTENCEGLQGF 138
Score = 37.5 bits (83), Expect = 0.008
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = +1
Query: 94 REIVHLQAGQCGNQIGAKFWEIISEEHGIDPTG 192
RE V + GQ G QIG WE+ EHG+D G
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAG 38
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 97.9 bits (233), Expect = 5e-21
Identities = 40/77 (51%), Positives = 56/77 (72%)
Frame = +3
Query: 276 GKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDDV 455
G+YVPR+I +DLEP +D +R+G Y +LF P+ + G+ A NN+A+GHYT G EL+D V
Sbjct: 57 GRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTV 116
Query: 456 LDVVRKECENCDCLQGF 506
LD +R+ +NC LQGF
Sbjct: 117 LDRIRRLADNCSGLQGF 133
Score = 44.8 bits (101), Expect = 5e-05
Identities = 20/58 (34%), Positives = 30/58 (51%)
Frame = +1
Query: 91 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASLRR 264
MRE++ + GQ G QIG WE+ EHGI P G S + E + ++++ R
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGR 58
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 97.9 bits (233), Expect = 5e-21
Identities = 40/77 (51%), Positives = 56/77 (72%)
Frame = +3
Query: 276 GKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDDV 455
G+YVPR+I +DLEP +D +R+G Y +LF P+ + G+ A NN+A+GHYT G EL+D V
Sbjct: 57 GRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTV 116
Query: 456 LDVVRKECENCDCLQGF 506
LD +R+ +NC LQGF
Sbjct: 117 LDRIRRLADNCSGLQGF 133
Score = 44.0 bits (99), Expect = 9e-05
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = +1
Query: 91 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNE 249
MRE++ + GQ G QIG WE+ EHGI P G E + ++++
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSD 53
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 97.9 bits (233), Expect = 5e-21
Identities = 40/77 (51%), Positives = 56/77 (72%)
Frame = +3
Query: 276 GKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDDV 455
G+YVPR+I +DLEP +D +R+G Y +LF P+ + G+ A NN+A+GHYT G EL+D V
Sbjct: 57 GRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTV 116
Query: 456 LDVVRKECENCDCLQGF 506
LD +R+ +NC LQGF
Sbjct: 117 LDRIRRLADNCSGLQGF 133
Score = 44.0 bits (99), Expect = 9e-05
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = +1
Query: 91 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNE 249
MRE++ + GQ G QIG WE+ EHGI P G E + ++++
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSD 53
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 97.9 bits (233), Expect = 5e-21
Identities = 40/77 (51%), Positives = 56/77 (72%)
Frame = +3
Query: 276 GKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDDV 455
G+YVPR+I +DLEP +D +R+G Y +LF P+ + G+ A NN+A+GHYT G EL+D V
Sbjct: 57 GRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTV 116
Query: 456 LDVVRKECENCDCLQGF 506
LD +R+ +NC LQGF
Sbjct: 117 LDRIRRLADNCSGLQGF 133
Score = 44.8 bits (101), Expect = 5e-05
Identities = 20/58 (34%), Positives = 30/58 (51%)
Frame = +1
Query: 91 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASLRR 264
MRE++ + GQ G QIG WE+ EHGI P G S + E + ++++ R
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEGESFTTFFSDTGSGR 58
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 97.1 bits (231), Expect = 9e-21
Identities = 42/77 (54%), Positives = 55/77 (71%)
Frame = +3
Query: 276 GKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDDV 455
GK+VPRAI +DLEP +D VR+G Y +LF P+ + G+ A NN+A+GHYT G EL+D V
Sbjct: 59 GKHVPRAIFVDLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARGHYTIGKELIDVV 118
Query: 456 LDVVRKECENCDCLQGF 506
+D VR+ E C LQGF
Sbjct: 119 MDRVRRLTERCQSLQGF 135
Score = 42.3 bits (95), Expect = 3e-04
Identities = 19/35 (54%), Positives = 22/35 (62%)
Frame = +1
Query: 91 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGV 195
MREIV + GQ G QIG WE+ EHGI P G+
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGL 35
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 95.5 bits (227), Expect = 3e-20
Identities = 39/77 (50%), Positives = 55/77 (71%)
Frame = +3
Query: 276 GKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDDV 455
G+YVPR+I +DLEP +D +R+G Y +LF P+ + G+ A NN+A+GHYT G EL+D
Sbjct: 57 GRYVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTT 116
Query: 456 LDVVRKECENCDCLQGF 506
LD +R+ +NC LQGF
Sbjct: 117 LDRIRRLADNCSGLQGF 133
Score = 41.9 bits (94), Expect = 4e-04
Identities = 17/34 (50%), Positives = 21/34 (61%)
Frame = +1
Query: 91 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTG 192
MRE++ + GQ G QIG WE+ EHGI P G
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDG 34
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 95.5 bits (227), Expect = 3e-20
Identities = 39/77 (50%), Positives = 55/77 (71%)
Frame = +3
Query: 276 GKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDDV 455
G+YVPR+I +DLEP +D +R+G Y +LF P+ + G+ A NN+A+GHYT G EL+D
Sbjct: 57 GRYVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTT 116
Query: 456 LDVVRKECENCDCLQGF 506
LD +R+ +NC LQGF
Sbjct: 117 LDRIRRLADNCSGLQGF 133
Score = 41.9 bits (94), Expect = 4e-04
Identities = 17/34 (50%), Positives = 21/34 (61%)
Frame = +1
Query: 91 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTG 192
MRE++ + GQ G QIG WE+ EHGI P G
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDG 34
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 94.7 bits (225), Expect = 5e-20
Identities = 41/77 (53%), Positives = 56/77 (72%)
Frame = +3
Query: 276 GKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDDV 455
GK+VPRAI++DLEP +D +R+G Y LF P+ + G+ A NN+A+GHYT G E++D V
Sbjct: 64 GKHVPRAIMVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARGHYTIGKEIIDVV 123
Query: 456 LDVVRKECENCDCLQGF 506
+D VR+ ENC LQGF
Sbjct: 124 MDRVRRLVENCRGLQGF 140
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +1
Query: 94 REIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLE 225
RE++ + GQ G Q+G WE+ EHGI P G+ L ++
Sbjct: 7 REVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVD 50
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 94.3 bits (224), Expect = 6e-20
Identities = 38/77 (49%), Positives = 56/77 (72%)
Frame = +3
Query: 276 GKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDDV 455
G++VPR+I +DLEP +D +R+GAY +LF P+ + G+ A NN+A+GHYT G E++D
Sbjct: 56 GRHVPRSIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHYTVGKEIIDTT 115
Query: 456 LDVVRKECENCDCLQGF 506
LD +R+ NC+ LQGF
Sbjct: 116 LDRIRRLANNCEGLQGF 132
Score = 40.3 bits (90), Expect = 0.001
Identities = 17/34 (50%), Positives = 21/34 (61%)
Frame = +1
Query: 91 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTG 192
MRE++ + GQ G QIG WE+ EHGI P G
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDG 34
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 93.5 bits (222), Expect = 1e-19
Identities = 39/82 (47%), Positives = 59/82 (71%), Gaps = 1/82 (1%)
Frame = +3
Query: 264 AESG-GKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAE 440
+E+G G++VPRA+++DLEP +D +R+G Y LF P+ + G+ A NN+A+GHYT G E
Sbjct: 54 SETGSGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKE 113
Query: 441 LVDDVLDVVRKECENCDCLQGF 506
++D LD +R+ +NC LQGF
Sbjct: 114 IIDLTLDRIRRLADNCTGLQGF 135
Score = 41.5 bits (93), Expect = 5e-04
Identities = 17/34 (50%), Positives = 21/34 (61%)
Frame = +1
Query: 91 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTG 192
MRE++ + GQ G QIG WE+ EHGI P G
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDG 34
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 93.5 bits (222), Expect = 1e-19
Identities = 39/82 (47%), Positives = 59/82 (71%), Gaps = 1/82 (1%)
Frame = +3
Query: 264 AESG-GKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAE 440
+E+G G++VPRA+++DLEP +D +R+G Y LF P+ + G+ A NN+A+GHYT G E
Sbjct: 53 SETGSGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKE 112
Query: 441 LVDDVLDVVRKECENCDCLQGF 506
++D LD +R+ +NC LQGF
Sbjct: 113 IIDLTLDRIRRLADNCTGLQGF 134
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +1
Query: 94 REIVHLQAGQCGNQIGAKFWEIISEEHGIDPTG 192
RE++ + GQ G QIG WE+ EHGI P G
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDG 33
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 93.5 bits (222), Expect = 1e-19
Identities = 39/82 (47%), Positives = 59/82 (71%), Gaps = 1/82 (1%)
Frame = +3
Query: 264 AESG-GKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAE 440
+E+G G++VPRA+++DLEP +D +R+G Y LF P+ + G+ A NN+A+GHYT G E
Sbjct: 54 SETGSGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKE 113
Query: 441 LVDDVLDVVRKECENCDCLQGF 506
++D LD +R+ +NC LQGF
Sbjct: 114 IIDLTLDRIRRLADNCTGLQGF 135
Score = 41.5 bits (93), Expect = 5e-04
Identities = 17/34 (50%), Positives = 21/34 (61%)
Frame = +1
Query: 91 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTG 192
MRE++ + GQ G QIG WE+ EHGI P G
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDG 34
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 93.5 bits (222), Expect = 1e-19
Identities = 39/82 (47%), Positives = 59/82 (71%), Gaps = 1/82 (1%)
Frame = +3
Query: 264 AESG-GKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAE 440
+E+G G++VPRA+++DLEP +D +R+G Y LF P+ + G+ A NN+A+GHYT G E
Sbjct: 54 SETGSGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKE 113
Query: 441 LVDDVLDVVRKECENCDCLQGF 506
++D LD +R+ +NC LQGF
Sbjct: 114 IIDLTLDRIRRLADNCTGLQGF 135
Score = 41.5 bits (93), Expect = 5e-04
Identities = 17/34 (50%), Positives = 21/34 (61%)
Frame = +1
Query: 91 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTG 192
MRE++ + GQ G QIG WE+ EHGI P G
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDG 34
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 89.0 bits (211), Expect = 2e-18
Identities = 38/79 (48%), Positives = 55/79 (69%)
Frame = +3
Query: 270 SGGKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 449
+GGK+VPR + +DLEP +D VR+G Y LF P+ + G+ A N +A+G YT G E++D
Sbjct: 63 AGGKHVPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMID 122
Query: 450 DVLDVVRKECENCDCLQGF 506
V+D V++ ENC+ LQGF
Sbjct: 123 VVMDRVKRLAENCNGLQGF 141
Score = 45.2 bits (102), Expect = 4e-05
Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = +1
Query: 94 REIVHLQAGQCGNQIGAKFWEIISEEHGIDPTG--VYRGTSDLQLERISVYYNEAS 255
RE++ + GQ G QIG WE+ EHGI P G V T D + E I+ ++ E +
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDGYHVEDDTYDEETETINTFFAETA 63
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 89.0 bits (211), Expect = 2e-18
Identities = 38/79 (48%), Positives = 55/79 (69%)
Frame = +3
Query: 270 SGGKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 449
+GGK+VPR + +DLEP +D VR+G Y LF P+ + G+ A N +A+G YT G E++D
Sbjct: 35 AGGKHVPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMID 94
Query: 450 DVLDVVRKECENCDCLQGF 506
V+D V++ ENC+ LQGF
Sbjct: 95 VVMDRVKRLAENCNGLQGF 113
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 65.7 bits (153), Expect = 3e-11
Identities = 32/77 (41%), Positives = 48/77 (62%), Gaps = 3/77 (3%)
Frame = +3
Query: 282 YVPRAILLDLEPGTMDA-VRSGAYGQLFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDD 452
YVPRA+L+DLEP ++ ++S + LF DN GAGNNWA G Y +G E+ +
Sbjct: 61 YVPRAVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEK 119
Query: 453 VLDVVRKECENCDCLQG 503
++D++ +E EN + L G
Sbjct: 120 IMDIIIREAENTNNLDG 136
Score = 39.9 bits (89), Expect = 0.001
Identities = 15/48 (31%), Positives = 28/48 (58%)
Frame = +1
Query: 100 IVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYY 243
++ + GQCGNQ+ FW+ + +EHGI+ G D+ ++ ++Y
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFY 54
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 65.7 bits (153), Expect = 3e-11
Identities = 32/77 (41%), Positives = 48/77 (62%), Gaps = 3/77 (3%)
Frame = +3
Query: 282 YVPRAILLDLEPGTMDA-VRSGAYGQLFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDD 452
YVPRA+L+DLEP ++ ++S + LF DN GAGNNWA G Y +G E+ +
Sbjct: 61 YVPRAVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEK 119
Query: 453 VLDVVRKECENCDCLQG 503
++D++ +E EN + L G
Sbjct: 120 IMDIIIREAENTNNLDG 136
Score = 39.9 bits (89), Expect = 0.001
Identities = 15/48 (31%), Positives = 28/48 (58%)
Frame = +1
Query: 100 IVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYY 243
++ + GQCGNQ+ FW+ + +EHGI+ G D+ ++ ++Y
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFY 54
>U39652-2|AAA80404.1| 817|Caenorhabditis elegans Hypothetical
protein R07E4.5 protein.
Length = 817
Score = 28.7 bits (61), Expect = 3.5
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = +1
Query: 526 RRHRFRNGHPPHLKDPRRVPRQNHEH 603
RRH + HP H + P P +H H
Sbjct: 761 RRHHYTQPHPHHQQMPHHQPHLHHAH 786
>Z92790-2|CAB07224.2| 377|Caenorhabditis elegans Hypothetical
protein H03G16.2 protein.
Length = 377
Score = 27.9 bits (59), Expect = 6.2
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +1
Query: 115 AGQCGNQIGAKFWEIISEEHGIDPTGVYR 201
+G C ++G K WE+ SE G PTG+ +
Sbjct: 233 SGDCLKKMGKK-WEVTSEAVGPRPTGILK 260
>U55364-6|AAA97973.1| 2541|Caenorhabditis elegans Hypothetical
protein F21C10.7 protein.
Length = 2541
Score = 27.9 bits (59), Expect = 6.2
Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = -1
Query: 518 NESVETLEAIAVLTLLADYIKDVVDELS-ALRVVSLGPVVAGAGLTEDEVV 369
N++ E + I VL DY+K +D+LS + + SL +V + ++E+V
Sbjct: 655 NQNEEQISRINVLIDKTDYVKTRLDQLSQKVELTSLLKIVEDVQIWQEEMV 705
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,646,884
Number of Sequences: 27780
Number of extensions: 210627
Number of successful extensions: 756
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 690
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 752
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1353389824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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